SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00392
Pre Gene Modal
BGIBMGA000503
Annotation
PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.563
 

Sequence

CDS
ATGCCGTCGACGTCGCGAACGAGGGGCTCCGGCCGTGGGTCTGACGGCTCGCTTCGGACTCAAGTCATAGCTCCCATGTCGGAGCGGCAGCAGCTGGCTTTGGTGATGCAAATATCATCACAAGATGCTCCTCCAGCCGCTCCGACTCCAGCAGAAGAAAGAAAGCGTACAAGACAACAACGCAACGAGCGTGGCGAAACACCTCTTCATGTCGCATCTATTAGAGGAGACCATGATCAAGTGAAAAAGCTTATTGATCAGGGTCAAGATCCGGATGTTCCTGATTTTGCTGGATGGACTCCTCTTCATGAAGCATGCAGCTATGGATGGTATCAGGTTGTAGTGGTGCTCGTAAATGGTGGTGCTAATGTCAATGCAAAAGGGTTGGACGATGACACTCCTCTGCATGATGCCACTACGTCTGGCAACTTAAAGATGGTAAAATTTCTTATTGAGCATGGAGCCGACCCATTTGTGAAGAACAGCAAGGGAAAAATGCCATCAGATTACGCAGCACCACACATCTATGAATATCTACAGTCTTTAAAGGATAGTAACGCGAGAGCAACACACCTCAGTCGCGCAAGGGATGATAACGTCAAGAAAGGCAATGCAAGTGGTAACAGTGAATGCAGTAAGCGGAACAACATGGAAACCCTAGCGCAGGGCGAAAATTTCGAAGGCAAAGATGCTACCTCGCAAGAAAAAGGATCGACGGAAAACAGAGATGAAAGTTCGCAGCTAAGTAGTGGCGTGGTGTCGTCCAGTCAAGACGACATCACGAGTAATAAGCGACAGCATGCAGAAGATAACCAAGAAACTGACGGAGCTGATGATGAAGTGTCAAAACGAAAGAAGAGGAAAGATGAAGAAAAAGAACCGATGGGTAAACCAGCCCCTGTTGCTAGGGGAGGACCCGGACGTAAACCTCCTGGTCCTGCAAGCAAGACAGGCGTGGCCCCACTCGGCAAAAGTGGAGGGGCACAGGGCTCTGGCAAGGGTGGATCGGGTGGCGGCTCTTCAGGAAAAAGCGGAATGCAGTCTCAAGGAAAAGGTGCCGGTGGAAAGAATAAGTCCTCAAGCTCCAAAGGTGGATCGGGATCGCAAAACAAGCAAGATAGAAAAAGTCCAGTGGCAAGTCCAAAGCCACATAGTAGTAAAGATAATAGTGAAGACACGGACGATCAGAAAACGCAAGAATCATCAGGGCCTAAAGTTCCTCCACTCAAGATCGTGATACCGGGTGGCGCCGGGGGCTCTGGCGGTAGAAACGAACAAGAAGGCGAAGGTCAAAGGGGAAGCGGGAAAGGTCGGGGTAGTGTGTCAACCCTGCCATACGTAATCCCGTGCACAAGCACCGACACGGGACAGACATCGGACAGCTCGGACGGAAATTCGGACGACAAAAGAACAATAGAAGGCGGGAAGGCCGGGCAGAGAGTGCTGCGTTCGCATAGAACCAATGACGACAAAGACAAAGAGAGGACGTCACCGCACGTTGGCGCTGGACAAAACCAATTAAACACGAACAAAAGTCCACCGCCTTCTAGTCACGATGATCACACTGTTTCTACATCGAGTGGCTCCAGTAGATCGGAACAAGGCAAAACCAAATTGGAGTTGCATCCAAGAAAAAGAAAACTAAAATCCTCCAAGGATCATTCGCGAGAATCGAAAAGCGATTCCACACAAGAAGCCAGCTCCCTCAGTCATAATATCACACACAGCAACCCGTATCAGATGTACATACATATACGGAAACAGATTCATCACCGTCAACGTGGTTTGTTTCCAGTCAAACCAAAACCTCCAAAAGATTTCAATAAATATCTGATGAATCGTTGTACATACACCCTACAAAGGAATGTCAATCCTGAGCCACAAATCGAGATACCACACAATTTGCCACCTCAAATGATAAATGAATTTATGACTCAGGAGAAAGAAAGGCATCGTTTACGGATACAACATCTGGTTGAAAAAGAAAAGCTTGTGCTGGCAGTTGAACAAGAAATACTTCGAGTGCACGGGCGCGCTGAACGCGCCGTAGCTAATCAGTCCCTGCCCTTCTCTGTTTGTACGATTCTTCGTGACAGAGAAGTTTACAACGTGCTAGCTCCAGAGCAGGAAGAGAAACGAAATGCGCAGCGCTCACGTTGCAACGGAAGGCAGATTAACTCTTGGCTTCAAGAGGTGGATGACAAATGGGAAAAAATTAAAGAGGGAATGCTTCGACGTCAGCACACCGAGGCTCAAACACTACATGCAGTACAAACCATGGGTTGGGAGTGGAAATTGAAGGAGCTGGGCCTCTGCGATTTTAAGACTATACCCAAAATTGATACTACCCATGTACCACAAATACATGTATCAAATTTTGACTTGCCCGCTTGA
Protein
MPSTSRTRGSGRGSDGSLRTQVIAPMSERQQLALVMQISSQDAPPAAPTPAEERKRTRQQRNERGETPLHVASIRGDHDQVKKLIDQGQDPDVPDFAGWTPLHEACSYGWYQVVVVLVNGGANVNAKGLDDDTPLHDATTSGNLKMVKFLIEHGADPFVKNSKGKMPSDYAAPHIYEYLQSLKDSNARATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQEKGSTENRDESSQLSSGVVSSSQDDITSNKRQHAEDNQETDGADDEVSKRKKRKDEEKEPMGKPAPVARGGPGRKPPGPASKTGVAPLGKSGGAQGSGKGGSGGGSSGKSGMQSQGKGAGGKNKSSSSKGGSGSQNKQDRKSPVASPKPHSSKDNSEDTDDQKTQESSGPKVPPLKIVIPGGAGGSGGRNEQEGEGQRGSGKGRGSVSTLPYVIPCTSTDTGQTSDSSDGNSDDKRTIEGGKAGQRVLRSHRTNDDKDKERTSPHVGAGQNQLNTNKSPPPSSHDDHTVSTSSGSSRSEQGKTKLELHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPKPPKDFNKYLMNRCTYTLQRNVNPEPQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDREVYNVLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKEGMLRRQHTEAQTLHAVQTMGWEWKLKELGLCDFKTIPKIDTTHVPQIHVSNFDLPA

Summary

Uniprot
ProteinModelPortal
PDB
3C5R     E-value=2.35748e-18,     Score=229

Ontologies

Topology

Length:
797
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00428
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00032
outside
1  -  797
 
 

Population Genetic Test Statistics

Pi
24.092114
Theta
15.916137
Tajima's D
-1.648995
CLR
0.007196
CSRT
0.0434478276086196
Interpretation
Uncertain
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