Gene

KWMTBOMO00378

Annotation

PREDICTED:_uncharacterized_protein_LOC106713896?_partial_[Papilio_machaon]

Location

Bomo_Chr1(-):11236893-11240318      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.923 PlasmaMembrane   Reliability : 1.568

CDS

ATGTTTTCTGTGTTTCAGACATTGTGCCCGACCGTGAATGTTTCGACACAACGACTGTCAGATCAGGTGAGGGCTATCCAGCGGCTTAGGCTGTTGGACCAGTCTCTTCTTGATCGACTACGCTACGAAGCGCTACCTGTTCCCATCGAACCACAAGAAAACCAAGTGGTAACTGACACCGTCGCCCCAATAATACAACACGATGAGGAAATTCAAGAACAGGTTTGTGCAAGTAACCAGGACTATGAGCGTTTGAGTAGTGCTTTGGAGGATTCTATTCAAGAATATAGGTTAGTCTCCGCCTGCTCTAGACCACGATTACCACGTTTGCCTATGCATAGACGTAATGTTTCGCTTGTAGGGGCCCTGGACTCTATTCTAAAACCCTATTTAGAATCAAGTACAGATCTAATTGATACGCACTCACTTCTATACTGCGGTGCGGTAGCGGTTTGTCGTGTAGCTGAGGTTAAGTCTCCAAACTTAACCCAGACAGCCTATCGACCCCCTACTAAACCACAATGGCAGTGCAGAATTGAGAAGCGAATTGATAGGGCCAGGATTCTTATAGCAAAGCTTATGTGCTTCCAGAAAGGAAATACTCGTCCACGGGTTATGTGTTTCGTCGATCAGGCCTTTGCCGGAACTGGAATAAGCTCAAACGAATACATGACCTGTATTATTGAGCGCATAGACTTCTGGAAGCAAAAAGTTTATGCTTGGGCAAGCCGTATTCGTCGGTATCGTCTAAGATCTGAGCGATACCATTTGAATAGAGTTTTCCAAAGAGATCAAAGAAGTGTATACAGAAACTGGGAGTCGTCTCAATCCCAAGTGACCGATGAGCCATACAATGTCAACGAAGAGGACATGTCAACATTTTGGAATAATATTTGGTCGATACCCATTGGTCACTCTGAAGGGGAATGGATACAAACTGTCAGGCGGGAATGTGAATCGTATAAAGAGATGGATTCAATAACAATTTCCGCCGTTGATGTTTCTCGTGCAGTACGTTCGATGCCAAATTGGAAAAGTCCGGGACCGGACGGACTGCACAGTTACTGGATCAAGTGGATCCGAAGTTCACATGAACGCCTGGCAGCTCAATTCCAACAGGCCCTTGAGTTGGGATCACTCCCAGATTTCATGACATCTGGTATCACTTATTTGATTTATAAATCTGGCAATACCTCGGATCCCAAGAATTACAGACCAATTACATGCTTACCTACTATCTATAAGCTACTTACATCCATTTTGAGAATCAAAATTCAAAATCACATTTTTAATAATAACATTTTATCACCTAATCAGAATGGATGTAAGGCAGGGTCTCGAGGTACAAAAGATTTGCTACTCATTGACATGACCATTACTCAACAAGTTCGGCGGAGTAAGAGGAACGTTCATATGGCTTGGATTGATTATAAGAAAGCGTATGACTCTGTGCCTCATACATGGCTAATGAGAGTTTTAGAGCTATATAAAATAAATCCCATACTATGCTCCTTTCTTAGCTCATGCATGGGTCAATGGTCTACGTTTCTTAGTCAACCAGGTCAGATGACTTCTTCTGCTGCCCCGAATTTAATAAGGATTAAGCGGGGTATCTTTCAGGGCGACAGTCTGAGTCCTTTGTGGTTTTGTTTGGCGCTTAATCCTTTAAGTACATTACTTAAAGATTCAACGCTAGGCTACCGACTTCGCAGAGGAGCTGAGGCTATATCACATCTCTTGTTCATGGATGATCTCAAATTATTTGCTTCCAAAAAACCAGACTTAATGAGTTTACTTAAAATAACCGACAATTTTAGTAAAGCCATTGGGATGGAATTTGGTGTTGATAAATGTGCGTTCATAGATGTACAGAGAGGTAAAGTTGTAAGCTCAGATTGCTTACTACTTAACCATAGTGTGGTCCTCAAGTCTCTTTGTGAATCGGAAACTTACAAGTACCTTGGTATGTTTGAAGTGCTGAATATTGTTGACGCAGATATGAAACAATCGTTTAGAGATCGGTTTTTTGGTCGTCTTATAAAGGTCTTAAAAAGCCATTTATCAGGCGGAAACAAAATCCGAGCGTTTAATGGTTGGGTCATGCCTATGTTAACATATTCCTTTGGCATACTAAGGTGGACGCAATCAGAGCTGGACGTACTGGACAGAAAAGTCAGACGATTGTTAACGGCATACAGAATGCATCATCCACGTTCGTCTGTAATGAGGTTGTATATTCCTCGGAAATGTGGGGGTCGTGGTATTTTGAATGCCAAGGATCTACATAACCGAGAGATATACAACCTTAGGGAATATTTCCTTAAGATGAACGTGAATATGTATCGGGATGTCGTTGCAGTCGATAAGGGGCTAACTCCGCTATCCTTAGCTAACGGGAATTGGAAGAGGCTGAAGGTAGAGAGTATTTCAGATCGCATAACTGTATGGAGGAGCAAGGAGTTACACGGTAGGTTCTACCGGGCTCTCACAGGGCCTGATGTAGACCAATTAGCTTCCGTAGCCTGGTTACGATTCAGTAACCTCTTTGGGGAAACTGAAGGTTTTATCTTTGCAATTATGGACGAAGTTATCATGACGAACAACTACCGGAAATATATACTAAAGGATGGGACGGTCGACATTTGTCGGGCATGCCACCGTCCGGGAGAGTCTATTAGACATATTGTTTCTGGCTGTTCTCGGTTTGCTAACGGCGAGTACTTGCATAGACATAACCAAGTGGCTAGGATTATCCATCAACAACTTGCTCTGAAATATGGTTATCTTGATTCTGCTGTACCTTATTACCAATACCAACCTCAACCAGTTCTTGATAATGGTCATGTTACGCTCTACTGGGACCGATCTATTATCACGGATAGGTATATTGTTGCCAATAAACCTGATATTGTGATAATAGATCGATCTGCGCGTCGAGCAGTGTTGGTTGATGTCACCATTCCTCATGACGAGAACCTCGTGAAGGCAGAAAAGGACAAATTAATAAAATATTTAGACCTGGCCCACGAGACTACCGCCATGTGGCATGTTGATTCAACCATCATTGTTCCAATAGTTGTATCGGTACACGGCTTGATAGCGAAAAGTTTCGATCAACATCTTAAGAAACTTTCGTTATCCAGCTGGGTTAAGGGCCTAATACAGAAAGCAGTTATCCTTGATACTGCACGCATTGTGAGGAGGTTTCTCAATCTGGAGTCCTAA

Protein

MFSVFQTLCPTVNVSTQRLSDQVRAIQRLRLLDQSLLDRLRYEALPVPIEPQENQVVTDTVAPIIQHDEEIQEQVCASNQDYERLSSALEDSIQEYRLVSACSRPRLPRLPMHRRNVSLVGALDSILKPYLESSTDLIDTHSLLYCGAVAVCRVAEVKSPNLTQTAYRPPTKPQWQCRIEKRIDRARILIAKLMCFQKGNTRPRVMCFVDQAFAGTGISSNEYMTCIIERIDFWKQKVYAWASRIRRYRLRSERYHLNRVFQRDQRSVYRNWESSQSQVTDEPYNVNEEDMSTFWNNIWSIPIGHSEGEWIQTVRRECESYKEMDSITISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHERLAAQFQQALELGSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINPILCSFLSSCMGQWSTFLSQPGQMTSSAAPNLIRIKRGIFQGDSLSPLWFCLALNPLSTLLKDSTLGYRLRRGAEAISHLLFMDDLKLFASKKPDLMSLLKITDNFSKAIGMEFGVDKCAFIDVQRGKVVSSDCLLLNHSVVLKSLCESETYKYLGMFEVLNIVDADMKQSFRDRFFGRLIKVLKSHLSGGNKIRAFNGWVMPMLTYSFGILRWTQSELDVLDRKVRRLLTAYRMHHPRSSVMRLYIPRKCGGRGILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISDRITVWRSKELHGRFYRALTGPDVDQLASVAWLRFSNLFGETEGFIFAIMDEVIMTNNYRKYILKDGTVDICRACHRPGESIRHIVSGCSRFANGEYLHRHNQVARIIHQQLALKYGYLDSAVPYYQYQPQPVLDNGHVTLYWDRSIITDRYIVANKPDIVIIDRSARRAVLVDVTIPHDENLVKAEKDKLIKYLDLAHETTAMWHVDSTIIVPIVVSVHGLIAKSFDQHLKKLSLSSWVKGLIQKAVILDTARIVRRFLNLES

Uniprot

W8BF34   Q76IN5   A0A1S4EQ35   W8AXW6   A0A2J7PIT9   A0A3P9MNJ5   + More
A0A3B3I0I7   A0A2J7PDQ6   A0A3B3HW39   E0W0M4   A0A3B3HU40   E0VSD9   E0VPJ4   E0W0H3   A0A3B3HQX9   A0A3P9M4C8   A0A3P9MMW4   A0A3B3H9G8   E0VPK6   A0A3P9K6Z6   A0A3B3ILW9   A0A3P9LVD0   A0A3P8NFL6   A0A3B5PPD0   A0A3P8Q3U1   A0A3P8P1Q8   A0A3P8PST2   A0A3P9QFG6   A0A3P8R5E8   A0A3P8QC13   A0A3P8PSV9   A0A3P8PU69   A0A3P8Q816   A0A3P8P1I6   A0A3P8QTM2   A0A3P8QK92   A0A3P8QJR1   A0A3B3I5C9   A0A3P8PUT7   A0A3P8PU63   A0A3B3H8G1   A0A3P8P8J8   A0A3P8P9Q9   A0A3B3HNT5   A0A3P8PQZ9   A0A3P8QRC6   A0A3B3HQ99   A0A3P8NKM6   A0A3P8NLS5   A0A3P8PIV2   A0A3P8Q8N4   A0A3P8NH43   A0A3P9DUW1   A0A0S7ESG3   E0VA19   A0A3P8QPZ9   A0A3P8NT65   A0A3P8NVY4   A0A3P8NRB8   A0A3P8QAR5   A0A3P8QRQ3   A0A2P2HZD8   H3B0S5   H3AQQ4  

Pubmed

24495485    12949131    17554307    20566863    23542700    25186727    + More
9215903   

EMBL

GAMC01018221    JAB88334.1    AB097127    BAC82595.1    GAMC01016897    JAB89658.1    + More
NEVH01024955    PNF16260.1    NEVH01026385    PNF14463.1    DS235861    EEB19180.1    DS235750    EEB16295.1    DS235366    EEB15300.1    DS235859    EEB19129.1    EEB15312.1    GBYX01473740    JAO07919.1    DS235004    EEB10225.1    IACF01001441    LAB67141.1    AFYH01092381    AFYH01092382    AFYH01106869   

Proteomes

UP000079169    UP000235965    UP000265180    UP000001038    UP000009046    UP000265100    + More
UP000002852    UP000242638    UP000265160    UP000008672   

Pfam

PF00078   RVT_1

Interpro

IPR000477   RT_dom        + More
IPR001611   Leu-rich_rpt       

ProteinModelPortal

W8BF34   Q76IN5   A0A1S4EQ35   W8AXW6   A0A2J7PIT9   A0A3P9MNJ5   + More
A0A3B3I0I7   A0A2J7PDQ6   A0A3B3HW39   E0W0M4   A0A3B3HU40   E0VSD9   E0VPJ4   E0W0H3   A0A3B3HQX9   A0A3P9M4C8   A0A3P9MMW4   A0A3B3H9G8   E0VPK6   A0A3P9K6Z6   A0A3B3ILW9   A0A3P9LVD0   A0A3P8NFL6   A0A3B5PPD0   A0A3P8Q3U1   A0A3P8P1Q8   A0A3P8PST2   A0A3P9QFG6   A0A3P8R5E8   A0A3P8QC13   A0A3P8PSV9   A0A3P8PU69   A0A3P8Q816   A0A3P8P1I6   A0A3P8QTM2   A0A3P8QK92   A0A3P8QJR1   A0A3B3I5C9   A0A3P8PUT7   A0A3P8PU63   A0A3B3H8G1   A0A3P8P8J8   A0A3P8P9Q9   A0A3B3HNT5   A0A3P8PQZ9   A0A3P8QRC6   A0A3B3HQ99   A0A3P8NKM6   A0A3P8NLS5   A0A3P8PIV2   A0A3P8Q8N4   A0A3P8NH43   A0A3P9DUW1   A0A0S7ESG3   E0VA19   A0A3P8QPZ9   A0A3P8NT65   A0A3P8NVY4   A0A3P8NRB8   A0A3P8QAR5   A0A3P8QRQ3   A0A2P2HZD8   H3B0S5   H3AQQ4  

KEGG

105841636    no KO assigned | (RefSeq) uncharacterized LOC105841636

GO

GO:0003964   GO:0016021  

Length:

1074

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.04234

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1  -  1074

 

 

Pi

1.357489

Theta

2.250926

Tajima's D

-1.898309

CLR

0

CSRT

0.0133993300334983

Interpretation

Uncertain