Gene
KWMTBOMO00374
Pre Gene Modal
BGIBMGA000512
Annotation
PREDICTED:_USP6_N-terminal-like_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.689
Sequence
CDS
ATGAATGAGGAGGCTCTGTTGGCACGGGCTTCCGAGGAGCGGGAGCGGATCTTCCAAAGATACGAAAGAGGACGTGAAAATCTTGTTGGTCTAATCGACCCTTGGGAGGATCCGGAGTTTGAAGAGTACCACAAAACCGATAGGTATGGCTTCATTCATGACGAACGTTTGCCGCAGAAAACGGCGCCGCAAAAGATTAACATTGAACTTGAAAGAGAAAAGAAATGGCTCAAGATGTTAGAAGAATGGGGCACATCTGAAACCAAACAAAAACTGCATCGTAGAATTTATAAGGGCATTCCAAACTCACTTCGTATAGGAGTATGGAGCAAGTTATTAGATGTAAACCGAATGAGATCTGACAATCCTGGAAAATATCGAGAGATGTTAAAATTAGCTAAACTTTGGTCTACTGACGTTCGACAAATTGATTCTGATGTAAATAGGCAGTTCCGAGAACATCAATTCTATAGAGAGAGATATTCTGAGAAACAGTGCTCTTTATTCAATGTTCTATGTGCATATAGCTTATATAACTCTGAAGTGGGCTATTGCCAAGGCATGTCAGGATTGGCTGGTGTGCTCTTAATGTATATGGACGAGGAAGATGCGTTCTGGGCACTTGCAGTACTCTTGTCAGACAAGAAGTACGCAATGCATGGATTATATATAGAAGGATTTCCAAAGTTAACGAGATTTCTAGAACACCATGATAAGATACTCACTAAATTTATGCCTAAGTTAAAGCGCCACTTTGATAAATTTGGCTTGGATGCTATACTTTACTCACTGAAATGGTTTTTTGTTTGTTTTGTTGAAAGGGTGCCATTTAGCCTTTGTTTAAGAGTTTGGGATATATATCTTTTGGATGGAGAAAGGGTTATCACAGCTATGGCCTATACAATACTCAAACTGCACAAAAAAACCATCATGAAGTTAAATGACATGGATTTAATTGTCAATTATATCCAGGTTAAACTTCATAAAGATTTTGGATATGAAGATGATATAGTTATTTATCAATTAGAGAAGTCCATGGAGGAATTGAAGAGAGCGAAGCTCGACTATCCAGGACTTCCACCACCTAACGAACTTCCTAAACGTCCTTTGGGTGTTTTCGTCGAACCAGATAAAAAATCCAAAATCGGACAGCGAGCTGAAAATTTTTCTGAGACTGAAAAACAGGCCAGAGCTAATGTGATATTAAGAAGAGAGAAAGCAGCGTTGGAGCTACAGGAACTTCGGGTGTCTCAAAGCGATACGGTTTCAGAGCACAGTGGCTTAGCGAGCGGTGTCCGGTGCGACGACTCGGTGTCGGGTCTGGGGTCTCGCAGGTCTCTCGCGGACACGAGTGTCACGAGCACGGCCGACCTGAGCGTGTTCTCTAGCGGACGGTCGCACGCGCCGGACAACTCCCTCGACACTCACAGCAACGTTAGCGACGACGGCACAGGTTCGGGCGTTTGCGGGATGAGTATACAGAGGGCGCCATCGACGAGCCACTCGACACCAAGGGCGACCCCCCACCCCCCATCCGCGTCCCCCATGTCGGACGACGTGGTCCGCATCCACGTCACCTACAATCCCCTGACGGCCAGCCCGTCGCACCTTCATCCCGTAAGTCCGAAAAAATATAAAACTTACACCGACGACCATTTGAAGCCCATCTCCCTTGGCTTCTACACGTCCAACGGAACCAACAATGTGCCCTCTGACAATAGGATTCGCATACAAGTACCTTCTGAAGATCTGCTTACTCCAGTCGTTGACTCTGGTAGAATTATAAACCAACGCTACCTTGAATCTCATTCAGACGCTTACGATCTGAAATAG
Protein
MNEEALLARASEERERIFQRYERGRENLVGLIDPWEDPEFEEYHKTDRYGFIHDERLPQKTAPQKINIELEREKKWLKMLEEWGTSETKQKLHRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKLNDMDLIVNYIQVKLHKDFGYEDDIVIYQLEKSMEELKRAKLDYPGLPPPNELPKRPLGVFVEPDKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVSQSDTVSEHSGLASGVRCDDSVSGLGSRRSLADTSVTSTADLSVFSSGRSHAPDNSLDTHSNVSDDGTGSGVCGMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYKTYTDDHLKPISLGFYTSNGTNNVPSDNRIRIQVPSEDLLTPVVDSGRIINQRYLESHSDAYDLK
Summary
Uniprot
H9ITD2
A0A194PGZ5
A0A194QS03
A0A2H1W1M5
A0A1Y1KQ89
D7EJZ8
+ More
N6U1U5 A0A0L7QXD5 A0A154P0S7 A0A310SUR5 E2AIC8 A0A1S4G778 A0A139W9L6 A0A2J7RDC9 A0A0M9ADZ4 A0A2J7RDB5 A0A3L8D8H3 A0A182GMI1 A0A1Q3FVS4 W5JHM9 A0A1Q3FW21 A0A1Q3FWA1 A0A1Q3FVV0 A0A151JSI0 A0A195BXV9 A0A151XBL3 A0A182WV38 A0A232F4M0 K7IVW6 A0A0C9QUL0 A0A182JGW3 A0A2A3ERY6 E2BKH8 A0A182UT39 A0A088A0N1 F5HJC1 A0A182LAN2 Q16XR6 A0A182I8R2 A0A1Q3EYC4 A0A084VC12 A0A182JNQ2 B0WKL8 A0A1B0DR56 A0A158NL38 A0A195F0T9 F4WFX8 A0A182R5Y9 A0A182QJA5 A0A195BH91 A0A182NFV6 Q7QFV5 A0A182F9E9 E0VZP2 E9JBT2 A0A1J1HYG3 A0A1B6C2J1 A0A182P766 A0A1B6KEQ9 A0A182XXC1 A0A182VXT3 A0A224XMJ5 A0A026WX47 A0A034WLX0 A0A0A1XNE0 N6VFB1 B4MRL0 A0A3B0JXF4 W8ASD5 A0A034WKF6 Q95RE0 A0A0A1XQ61 B4HQZ7 A0A1I8M2Y8 A0A0M4EHB6 A0A1W4VQ19 A0A1I8PF32 A0A0J9RCD2 A0A0B4JD18 A0A0Q9XMW7 T1PJ32 A0A0P4WJY6 A0A182MSA3 B4H8F8 B4LJD4 B3MHH2 A0A1I8M2Z5 A1Z9K4 B4KTD3 A0A1B0G7Q6
N6U1U5 A0A0L7QXD5 A0A154P0S7 A0A310SUR5 E2AIC8 A0A1S4G778 A0A139W9L6 A0A2J7RDC9 A0A0M9ADZ4 A0A2J7RDB5 A0A3L8D8H3 A0A182GMI1 A0A1Q3FVS4 W5JHM9 A0A1Q3FW21 A0A1Q3FWA1 A0A1Q3FVV0 A0A151JSI0 A0A195BXV9 A0A151XBL3 A0A182WV38 A0A232F4M0 K7IVW6 A0A0C9QUL0 A0A182JGW3 A0A2A3ERY6 E2BKH8 A0A182UT39 A0A088A0N1 F5HJC1 A0A182LAN2 Q16XR6 A0A182I8R2 A0A1Q3EYC4 A0A084VC12 A0A182JNQ2 B0WKL8 A0A1B0DR56 A0A158NL38 A0A195F0T9 F4WFX8 A0A182R5Y9 A0A182QJA5 A0A195BH91 A0A182NFV6 Q7QFV5 A0A182F9E9 E0VZP2 E9JBT2 A0A1J1HYG3 A0A1B6C2J1 A0A182P766 A0A1B6KEQ9 A0A182XXC1 A0A182VXT3 A0A224XMJ5 A0A026WX47 A0A034WLX0 A0A0A1XNE0 N6VFB1 B4MRL0 A0A3B0JXF4 W8ASD5 A0A034WKF6 Q95RE0 A0A0A1XQ61 B4HQZ7 A0A1I8M2Y8 A0A0M4EHB6 A0A1W4VQ19 A0A1I8PF32 A0A0J9RCD2 A0A0B4JD18 A0A0Q9XMW7 T1PJ32 A0A0P4WJY6 A0A182MSA3 B4H8F8 B4LJD4 B3MHH2 A0A1I8M2Z5 A1Z9K4 B4KTD3 A0A1B0G7Q6
Pubmed
19121390
26354079
28004739
18362917
19820115
23537049
+ More
20798317 17510324 30249741 26483478 20920257 23761445 28648823 20075255 12364791 20966253 24438588 21347285 21719571 20566863 21282665 25244985 24508170 25348373 25830018 15632085 17994087 24495485 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 25315136 22936249 18057021
20798317 17510324 30249741 26483478 20920257 23761445 28648823 20075255 12364791 20966253 24438588 21347285 21719571 20566863 21282665 25244985 24508170 25348373 25830018 15632085 17994087 24495485 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 25315136 22936249 18057021
EMBL
BABH01007164
BABH01007165
KQ459605
KPI91979.1
KQ461196
KPJ06321.1
+ More
ODYU01005657 SOQ46732.1 GEZM01077015 GEZM01077014 GEZM01077013 GEZM01077012 GEZM01077011 GEZM01077010 GEZM01077009 JAV63464.1 KQ972213 EFA12924.2 APGK01042947 KB741011 KB632341 ENN75525.1 ERL92998.1 KQ414705 KOC63221.1 KQ434783 KZC04848.1 KQ759893 OAD62092.1 GL439757 EFN66803.1 KYB24592.1 NEVH01005291 PNF38828.1 KQ435687 KOX81373.1 PNF38827.1 QOIP01000011 RLU16810.1 JXUM01074654 JXUM01074655 JXUM01074656 JXUM01074657 JXUM01074658 KQ562843 KXJ75029.1 GFDL01003334 JAV31711.1 ADMH02001495 ETN62314.1 GFDL01003307 JAV31738.1 GFDL01003323 JAV31722.1 GFDL01003316 JAV31729.1 KQ978530 KYN30329.1 KQ978501 KYM93494.1 KQ982320 KYQ57744.1 NNAY01001060 OXU25297.1 GBYB01007442 GBYB01007444 JAG77209.1 JAG77211.1 KZ288191 PBC34498.1 GL448795 EFN83818.1 AAAB01008844 EGK96382.1 CH477534 EAT39376.1 APCN01003108 GFDL01014748 JAV20297.1 ATLV01009975 ATLV01009976 KE524560 KFB35506.1 DS231974 EDS29949.1 AJVK01019689 AJVK01019690 AJVK01019691 ADTU01019235 ADTU01019236 ADTU01019237 KQ981866 KYN34093.1 GL888128 EGI66745.1 AXCN02000249 KQ976488 KYM83536.1 EAA05970.5 DS235854 EEB18848.1 GL771517 EFZ09722.1 CVRI01000036 CRK92995.1 GEDC01029704 JAS07594.1 GEBQ01030037 JAT09940.1 GFTR01007207 JAW09219.1 KK107078 EZA60418.1 GAKP01003807 JAC55145.1 GBXI01001912 JAD12380.1 CM000071 ENO01745.2 CH963850 EDW74749.2 OUUW01000001 SPP75768.1 GAMC01017538 JAB89017.1 GAKP01003809 GAKP01003808 JAC55144.1 AY061446 AE013599 AAL28994.1 AAM68568.1 GBXI01002906 GBXI01001609 JAD11386.1 JAD12683.1 CH480816 EDW47794.1 CP012524 ALC41935.1 CM002911 KMY93657.1 ADV37171.2 CH933808 KRG05416.1 KA648771 AFP63400.1 GDRN01049978 GDRN01049977 JAI66495.1 AXCM01012166 CH479223 EDW34993.1 CH940648 EDW60514.2 KRF79451.1 CH902619 EDV37972.1 KPU77179.1 AAG22270.1 EDW10645.1 CCAG010016890
ODYU01005657 SOQ46732.1 GEZM01077015 GEZM01077014 GEZM01077013 GEZM01077012 GEZM01077011 GEZM01077010 GEZM01077009 JAV63464.1 KQ972213 EFA12924.2 APGK01042947 KB741011 KB632341 ENN75525.1 ERL92998.1 KQ414705 KOC63221.1 KQ434783 KZC04848.1 KQ759893 OAD62092.1 GL439757 EFN66803.1 KYB24592.1 NEVH01005291 PNF38828.1 KQ435687 KOX81373.1 PNF38827.1 QOIP01000011 RLU16810.1 JXUM01074654 JXUM01074655 JXUM01074656 JXUM01074657 JXUM01074658 KQ562843 KXJ75029.1 GFDL01003334 JAV31711.1 ADMH02001495 ETN62314.1 GFDL01003307 JAV31738.1 GFDL01003323 JAV31722.1 GFDL01003316 JAV31729.1 KQ978530 KYN30329.1 KQ978501 KYM93494.1 KQ982320 KYQ57744.1 NNAY01001060 OXU25297.1 GBYB01007442 GBYB01007444 JAG77209.1 JAG77211.1 KZ288191 PBC34498.1 GL448795 EFN83818.1 AAAB01008844 EGK96382.1 CH477534 EAT39376.1 APCN01003108 GFDL01014748 JAV20297.1 ATLV01009975 ATLV01009976 KE524560 KFB35506.1 DS231974 EDS29949.1 AJVK01019689 AJVK01019690 AJVK01019691 ADTU01019235 ADTU01019236 ADTU01019237 KQ981866 KYN34093.1 GL888128 EGI66745.1 AXCN02000249 KQ976488 KYM83536.1 EAA05970.5 DS235854 EEB18848.1 GL771517 EFZ09722.1 CVRI01000036 CRK92995.1 GEDC01029704 JAS07594.1 GEBQ01030037 JAT09940.1 GFTR01007207 JAW09219.1 KK107078 EZA60418.1 GAKP01003807 JAC55145.1 GBXI01001912 JAD12380.1 CM000071 ENO01745.2 CH963850 EDW74749.2 OUUW01000001 SPP75768.1 GAMC01017538 JAB89017.1 GAKP01003809 GAKP01003808 JAC55144.1 AY061446 AE013599 AAL28994.1 AAM68568.1 GBXI01002906 GBXI01001609 JAD11386.1 JAD12683.1 CH480816 EDW47794.1 CP012524 ALC41935.1 CM002911 KMY93657.1 ADV37171.2 CH933808 KRG05416.1 KA648771 AFP63400.1 GDRN01049978 GDRN01049977 JAI66495.1 AXCM01012166 CH479223 EDW34993.1 CH940648 EDW60514.2 KRF79451.1 CH902619 EDV37972.1 KPU77179.1 AAG22270.1 EDW10645.1 CCAG010016890
Proteomes
UP000005204
UP000053268
UP000053240
UP000007266
UP000019118
UP000030742
+ More
UP000053825 UP000076502 UP000000311 UP000235965 UP000053105 UP000279307 UP000069940 UP000249989 UP000000673 UP000078492 UP000078542 UP000075809 UP000076407 UP000215335 UP000002358 UP000075880 UP000242457 UP000008237 UP000075903 UP000005203 UP000007062 UP000075882 UP000008820 UP000075840 UP000030765 UP000075881 UP000002320 UP000092462 UP000005205 UP000078541 UP000007755 UP000075900 UP000075886 UP000078540 UP000075884 UP000069272 UP000009046 UP000183832 UP000075885 UP000076408 UP000075920 UP000053097 UP000001819 UP000007798 UP000268350 UP000000803 UP000001292 UP000095301 UP000092553 UP000192221 UP000095300 UP000009192 UP000075883 UP000008744 UP000008792 UP000007801 UP000092444
UP000053825 UP000076502 UP000000311 UP000235965 UP000053105 UP000279307 UP000069940 UP000249989 UP000000673 UP000078492 UP000078542 UP000075809 UP000076407 UP000215335 UP000002358 UP000075880 UP000242457 UP000008237 UP000075903 UP000005203 UP000007062 UP000075882 UP000008820 UP000075840 UP000030765 UP000075881 UP000002320 UP000092462 UP000005205 UP000078541 UP000007755 UP000075900 UP000075886 UP000078540 UP000075884 UP000069272 UP000009046 UP000183832 UP000075885 UP000076408 UP000075920 UP000053097 UP000001819 UP000007798 UP000268350 UP000000803 UP000001292 UP000095301 UP000092553 UP000192221 UP000095300 UP000009192 UP000075883 UP000008744 UP000008792 UP000007801 UP000092444
Pfam
PF00566 RabGAP-TBC
SUPFAM
SSF47923
SSF47923
ProteinModelPortal
H9ITD2
A0A194PGZ5
A0A194QS03
A0A2H1W1M5
A0A1Y1KQ89
D7EJZ8
+ More
N6U1U5 A0A0L7QXD5 A0A154P0S7 A0A310SUR5 E2AIC8 A0A1S4G778 A0A139W9L6 A0A2J7RDC9 A0A0M9ADZ4 A0A2J7RDB5 A0A3L8D8H3 A0A182GMI1 A0A1Q3FVS4 W5JHM9 A0A1Q3FW21 A0A1Q3FWA1 A0A1Q3FVV0 A0A151JSI0 A0A195BXV9 A0A151XBL3 A0A182WV38 A0A232F4M0 K7IVW6 A0A0C9QUL0 A0A182JGW3 A0A2A3ERY6 E2BKH8 A0A182UT39 A0A088A0N1 F5HJC1 A0A182LAN2 Q16XR6 A0A182I8R2 A0A1Q3EYC4 A0A084VC12 A0A182JNQ2 B0WKL8 A0A1B0DR56 A0A158NL38 A0A195F0T9 F4WFX8 A0A182R5Y9 A0A182QJA5 A0A195BH91 A0A182NFV6 Q7QFV5 A0A182F9E9 E0VZP2 E9JBT2 A0A1J1HYG3 A0A1B6C2J1 A0A182P766 A0A1B6KEQ9 A0A182XXC1 A0A182VXT3 A0A224XMJ5 A0A026WX47 A0A034WLX0 A0A0A1XNE0 N6VFB1 B4MRL0 A0A3B0JXF4 W8ASD5 A0A034WKF6 Q95RE0 A0A0A1XQ61 B4HQZ7 A0A1I8M2Y8 A0A0M4EHB6 A0A1W4VQ19 A0A1I8PF32 A0A0J9RCD2 A0A0B4JD18 A0A0Q9XMW7 T1PJ32 A0A0P4WJY6 A0A182MSA3 B4H8F8 B4LJD4 B3MHH2 A0A1I8M2Z5 A1Z9K4 B4KTD3 A0A1B0G7Q6
N6U1U5 A0A0L7QXD5 A0A154P0S7 A0A310SUR5 E2AIC8 A0A1S4G778 A0A139W9L6 A0A2J7RDC9 A0A0M9ADZ4 A0A2J7RDB5 A0A3L8D8H3 A0A182GMI1 A0A1Q3FVS4 W5JHM9 A0A1Q3FW21 A0A1Q3FWA1 A0A1Q3FVV0 A0A151JSI0 A0A195BXV9 A0A151XBL3 A0A182WV38 A0A232F4M0 K7IVW6 A0A0C9QUL0 A0A182JGW3 A0A2A3ERY6 E2BKH8 A0A182UT39 A0A088A0N1 F5HJC1 A0A182LAN2 Q16XR6 A0A182I8R2 A0A1Q3EYC4 A0A084VC12 A0A182JNQ2 B0WKL8 A0A1B0DR56 A0A158NL38 A0A195F0T9 F4WFX8 A0A182R5Y9 A0A182QJA5 A0A195BH91 A0A182NFV6 Q7QFV5 A0A182F9E9 E0VZP2 E9JBT2 A0A1J1HYG3 A0A1B6C2J1 A0A182P766 A0A1B6KEQ9 A0A182XXC1 A0A182VXT3 A0A224XMJ5 A0A026WX47 A0A034WLX0 A0A0A1XNE0 N6VFB1 B4MRL0 A0A3B0JXF4 W8ASD5 A0A034WKF6 Q95RE0 A0A0A1XQ61 B4HQZ7 A0A1I8M2Y8 A0A0M4EHB6 A0A1W4VQ19 A0A1I8PF32 A0A0J9RCD2 A0A0B4JD18 A0A0Q9XMW7 T1PJ32 A0A0P4WJY6 A0A182MSA3 B4H8F8 B4LJD4 B3MHH2 A0A1I8M2Z5 A1Z9K4 B4KTD3 A0A1B0G7Q6
PDB
3QYE
E-value=5.63095e-30,
Score=328
Ontologies
GO
Topology
Length:
610
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12899
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00531
outside
1 - 610
Population Genetic Test Statistics
Pi
22.74125
Theta
19.438116
Tajima's D
0.510333
CLR
0.053487
CSRT
0.525523723813809
Interpretation
Uncertain
