SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00373  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000714
Annotation
PREDICTED:_proton-coupled_amino_acid_transporter_4_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.642
 

Sequence

CDS
ATGGTGAACGAACCAAATGGCGCCATTCCAGCGCCACAGGAGTTGGAAACATTTATATCTCCGGATGAAAAGAACAAAGAAAAGATTGTTAGCAAATATAACATGACGAAAGATGCGGAGTCAGGAGACTTTGATCCGTTCACCGAAAGGAAGTTGGACACTCCTACTTCGAATATGGACACTCTAACACACTTATTGAAGGCTTCCCTGGGTACTGGAATCTTAGCCATGCCCAAAGCCTTCAAGGCAGCCGGATTGATCAATGGAATACTCTTCACGGTTATCGTGGCCGTCGTCTGCACTCACTGCTCGTATATACTTGTTAAATGTGCCCACGTTTTGTACAAGAAGACGAAAAAAACTCAGATGTCCTTTGCGGAAGTGGGCGAGGCGGCTTTGGATAACGGTCCACAGCCGTTAAGAAAATGGGCGAATGCTTTCAGGATATTCATCGTCATTAGTCTCTTTATAACGTACTTTGGGACGTGCTCCGTCTATACGGTCATAATAGCACGAAACATTTTACAGATAATTCAGTTCTACTGCGGCGATATTATCAATGAACGTTTTCTCATTATAATATTACTGGTCCCACTTATTCTCATGGCCTGGATTCGAAATCTCAAGTACTTAGCTCCTGTGTCAATGATCGCGAATTTATTCATGGCTGTGGGTCTAGGGATCACCCTTTACTACTTAGTAGGTACTGGACAACTGCAATACGATAAGATCAAGGACATGCTCTTCAAACATCCCAGCGAATGGCCCGAATTCTTTTCGCTCACAATTTTCGCAATGGAAGCCATCGGAGTTGTGATGCCTCTCGAAAACTCAATGAAGACCCCTCGTGCGATGCTCGGTATCTGCGGTGTATTGAACAAAGGCATGTCCGGTGTTACACTAGTCTACATTCTTCTTGGCTTCCTCGGCTACCTGCGGTTCGGAGAAGAAGTCCAAGATTCCATCACTCTTAGTTTAGGGGACGCGATCCCTGCTCAAATAGTAAAACTGTCTATAGCCATTGCAGTATACTGCACTTTTGGCCTGCAGTTCTTCGTGTGCATTGATATTATGTGGAACGGTATTAAGGATAAATTCACGAAACGACCGGAGCTCGCCGATTACATCATGAGAACGATTATGGTCACGGTGTGCGTGTCGATTGCCGCGGCCGTTCCCCAGATTAGTCCTTTGATGGGAGTCATTGGCGCATTCTGTTTCTCCATCCTCGGTCTTATCGCACCAGCAATGATTGAAGTCATTACGTATTGGGAACCGGGAGTCGGCCCAGGAAAGTATTTGATCTGGAAAAACATTCTAGTGGTTATTTTTGGTACATTCTCCTTAGTTTTTGGTACTAAAGACGCCATACTTGCAATTTTAAAAGACTTCTAA
Protein
MVNEPNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDIINERFLIIILLVPLILMAWIRNLKYLAPVSMIANLFMAVGLGITLYYLVGTGQLQYDKIKDMLFKHPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITLSLGDAIPAQIVKLSIAIAVYCTFGLQFFVCIDIMWNGIKDKFTKRPELADYIMRTIMVTVCVSIAAAVPQISPLMGVIGAFCFSILGLIAPAMIEVITYWEPGVGPGKYLIWKNILVVIFGTFSLVFGTKDAILAILKDF

Summary

EMBL
BABH01007164    ODYU01005657    SOQ46733.1    GDQN01010188    GDQN01007066    JAT80866.1    + More
JAT83988.1    KQ461196    KPJ06322.1    KQ459605    KPI91978.1    GAIX01008193    JAA84367.1    MG992469    AXY94907.1    AGBW02015069    OWR40620.1    JTDY01001553    KOB73554.1    APCN01000217    AAAB01008807    EAA04057.4    EDO64522.1    EDO64523.1    EDO64524.1    AXCN02000593    AXCM01000671    GAMD01000309    JAB01282.1    GGFL01004475    MBW68653.1    GGFK01001235    MBW34556.1    EDO64525.1    GGFM01006459    MBW27210.1    GGFJ01005051    MBW54192.1    GGFJ01005071    MBW54212.1    KQ434846    KZC08358.1    DS231833    EDS32189.1    KQ777311    OAD52142.1    KQ435729    KOX77627.1    JR042358    AEY59605.1    GANO01003126    JAB56745.1    KZ288364    PBC26879.1    GDAI01001924    JAI15679.1    UFQS01000120    UFQT01000120    SSX00035.1    SSX20415.1    GFDL01008026    JAV27019.1    AXCP01008206    UFQS01000356    UFQT01000356    SSX03120.1    SSX23486.1    GDUN01000062    JAN95857.1    GAPW01001325    JAC12273.1    KQ414633    KOC67042.1    SSX03121.1    SSX23487.1    KK107079    QOIP01000010    EZA60157.1    RLU17829.1    GFDF01009166    JAV04918.1    SSX00034.1    SSX20414.1    LBMM01000545    KMQ98090.1    GL762647    EFZ20983.1    ADMH02001751    ETN61181.1    NEVH01005291    PNF38842.1    PNF38840.1    CH916366    EDV96528.1    GGFL01004532    MBW68710.1    CVRI01000002    CRK86864.1    KQ981335    KYN42665.1    CH933809    EDW18447.1    GAMC01019199    JAB87356.1    GALA01001158    JAA93694.1    ADTU01013180    KQ976401    KYM92570.1    GALA01001159    JAA93693.1    PBC26878.1    GDHF01030479    GDHF01004180    JAI21835.1    JAI48134.1    JRES01000850    KNC27738.1    GFDL01008012    JAV27033.1    CH940647    EDW69633.1    GBXI01013416    GBXI01008650    JAD00876.1    JAD05642.1    KQ978023    KYM97914.1    KQ982769    KYQ50851.1    GL888182    EGI65707.1    GL437442    EFN70451.1    GL445914    EFN88832.1    NNAY01001356    OXU24256.1    KA646892    AFP61521.1    CP012525    ALC44494.1    KQ980636    KYN14945.1    OUUW01000002    SPP76859.1    KRG06192.1    KRF84490.1    CH379070    EAL30117.1    GEDC01010629    JAS26669.1    GDHF01012095    JAI40219.1    GBXI01006896    JAD07396.1    CH964095    EDW79102.2    ATLV01012374    KE524785    KFB36668.1    CM000159    KRK00867.1    CCAG010019568    SPP76860.1    KRT08657.1    CH954178    EDV51209.2   
Pfam
PF01490   Aa_trans
Interpro
IPR013057   AA_transpt_TM       

Ontologies

Topology

Length:
464
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
214.2835
Exp number, first 60 AAs:
0.00286
Total prob of N-in:
0.09201
outside
1  -  85
TMhelix
86  -  108
inside
109  -  148
TMhelix
149  -  171
outside
172  -  185
TMhelix
186  -  208
inside
209  -  212
TMhelix
213  -  235
outside
236  -  254
TMhelix
255  -  277
inside
278  -  289
TMhelix
290  -  312
outside
313  -  331
TMhelix
332  -  354
inside
355  -  374
TMhelix
375  -  392
outside
393  -  395
TMhelix
396  -  418
inside
419  -  438
TMhelix
439  -  461
outside
462  -  464
 
 

Population Genetic Test Statistics

Pi
20.278061
Theta
19.161021
Tajima's D
0.17086
CLR
0.014802
CSRT
0.426278686065697
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 TAIQTVGK 100.00 0.001
26280517 DADVIAVQDIR 100.00 0.001
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