Gene

KWMTBOMO00367  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000515

Annotation

THAP_domain-containing_protein_9?_partial_[Camponotus_floridanus]

Location

Bomo_Chr1(-):11009848-11018177      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.49

CDS

ATGAACAAATTATACATCGGTAATTTGCCGTATGAAGTTGACGAGGCAGCTGTACGACAATTGTTTGCTGAACAAAATTTGACTGTTGCTGAAATTTCGGTGAAACGAGGTGGCTACGCATTCGTGGATTTCCCTGACCAATCTGCAGCCGATCGAGCCATCGATAAACTACACGGGTACTCATTTTGCGGGCTCCCATTGATCGTTGAACCTTCAGTGGCAAACAAGAAAATGGTTAATGTACCCAACCTTGAGAGATCGAGTGCCGCCCAGCTCAACGAAGGCAGCAACGGCTCGCCATCAGGAGGATGGAGTGCTGATCACGTTACGCAATTAGAAAACATTGGAGTAACCGACCTTATCCAGCGTTATGAAAGAAATGTTTCATCGGGTCAAAGTACTAACCAGAAATATCCGCCTGCTTTAAGAATTTTTGCCACTACTCTTCACTTTTATTCGCCAAAGGCGTACGCGTATGTAAGAAAAAAATTCCAAACAGCTTTGCCTCATATTCGAACCATAAAAAAGTGGTACCAATCTATCGATGCTCAGCCTGGATTCACGCAAGAATCATTAAAAGCGATAAAACTTAAAACTGCCTGCACTAAACACAAATTGTTGTGTAATTTAGTTTTAGATGAAATGGCAATCAGACAGCATGTAGAGTGGGATGGAAAACAAATGCACGGGTATGTTGATATTTCTAATTCTGCAGAACAAGGGGATTGTTTACCCGAAGCCAAAGAAGTTCTTGTATTTTTAGTTACCGCAATTAATGGGGCTTGGAAAATACCAGTCGGGTATTTTCTCATTGACGGTGTCACAGGAGAACAACGGTCTAATCTTGTCAGACAATGTTTGGAATTATTAGAAGATACAGGTATTCAAGTTACCTCGATGACTTTTGACGGCTGTCCAGCCAATATCACCATGGCTAAGAAACTCGGATGTTCTTTTGAAGTTGAAAACTTAAAATCATATTTTGAGCACCCCGTTACTCGTCAACCTGTACATATTTTTCTCGATCCATGCCACATGCTGAAGCTATTGAGAAATGCTTTTGAATCATATGGATGTTTCATGGATGCTTCAAATAGGTGTATAAAATGGAGTCATCTAAAAAATCTGTATGACATTCAGGATAAAGAAAAACTGCACTTAGCAAATAAATTACGAAAAAGTCATATCTTTTTCAAGAACCAAAAAATGAAAGTTCGCTTAGCTTCGCAATTATTTAGCAACAGTGTTGCAGATGCCCTGAATTTTTGTTGTGAACTTCAAATCGCTGGTTTTGATGATGTAGAAGGCACTGTGGAATATCTAAAAACTATCAACAACTTGTTCGATGTGTTAAATTCAAGGCATATGGCCCAACTCCATTATAAAAAACCAGTTTGCCCAGGCAACAAAGACAAGGTATTTGAAACTTTAGAAAAGGCGAAACGGTGTCTAACATCTATAAAGCTTTCAGATGGTACAAAAGCTATCATTACACCCAGAAAAACCGGTTTTATTGGTTTATTAGTGTGCATAGAAAGCCTCAAGGCCTTGTATATACAACTAATTGAAAAGGACCAAAAACTTAAGTACATTCCGGCTTACAAAATCAGCCAAGATCATTTAGAGCTTATGTTTGGACATATACGGTCACATGGTGGATGCAGCACCAACCCAACGGCGCGACAGTTTCAAGCAATATATAAAAAGCTCTTGGTAAAGTCGGAGCTTAGAGATGTAGACCAGGGAAACTGTATAGCTCTTGAGGAGGTTTCTTTTTTGTCGTGCTCTTCAGCTGTCCAAAATATAAATCTGACAATCGAACCATGTAAGTTACACGAAGGTAATGACGAAGACGAGATGAGTTTATTATATGAACAAGCCGTATTTGATGAGGAAATCAGTATACTTGTACAAGATGTCACAGAATTTAGTAGCCAGGTATGA

Protein

MNKLYIGNLPYEVDEAAVRQLFAEQNLTVAEISVKRGGYAFVDFPDQSAADRAIDKLHGYSFCGLPLIVEPSVANKKMVNVPNLERSSAAQLNEGSNGSPSGGWSADHVTQLENIGVTDLIQRYERNVSSGQSTNQKYPPALRIFATTLHFYSPKAYAYVRKKFQTALPHIRTIKKWYQSIDAQPGFTQESLKAIKLKTACTKHKLLCNLVLDEMAIRQHVEWDGKQMHGYVDISNSAEQGDCLPEAKEVLVFLVTAINGAWKIPVGYFLIDGVTGEQRSNLVRQCLELLEDTGIQVTSMTFDGCPANITMAKKLGCSFEVENLKSYFEHPVTRQPVHIFLDPCHMLKLLRNAFESYGCFMDASNRCIKWSHLKNLYDIQDKEKLHLANKLRKSHIFFKNQKMKVRLASQLFSNSVADALNFCCELQIAGFDDVEGTVEYLKTINNLFDVLNSRHMAQLHYKKPVCPGNKDKVFETLEKAKRCLTSIKLSDGTKAIITPRKTGFIGLLVCIESLKALYIQLIEKDQKLKYIPAYKISQDHLELMFGHIRSHGGCSTNPTARQFQAIYKKLLVKSELRDVDQGNCIALEEVSFLSCSSAVQNINLTIEPCKLHEGNDEDEMSLLYEQAVFDEEISILVQDVTEFSSQV

Uniprot

A0A2H1VM77   A0A1Y1JYF3   A0A1Y1JVC6   A0A1Y1K320   E2AQS3   A0A1Y1KU95   + More
J9KAE9   J9JZH0   X1X489   X1X5Z2   A0A151IJP2   A0A151IJM3   A0A2A4JUC7   A0A1Y1MGQ7   A0A1Y1MGQ8   A0A2S2NIL6   A0A151WXA5   A0A2S2PNR3   J9M688   J9LNJ4   A0A2S2PE11   A0A2A4JJZ8   J9KRW2   J9LRN9   J9JRC6   J9K966   A0A146NQI8   J9KWL5   A0A1E1XEX7   J9LWE0   A0A151J7W4   T2M5L7   J9K2S6   A0A1A8B8M0   A0A1A8CVN9   A0A1A8U049   I3JY54   J9JUB1   A0A2S2PEK2   J9LL83   J9KY26   A0A1Y1LE13   J9LWZ8   J9JS62   A0A151IXW5   A0A151IM28   J9KRT1   X1X8L8   E2A8K2   J9LVQ5   J9M2N4   J9LZ19   A0A1A8D9U5   J9JTA4   J9KVX0   A0A1Y1NAF9   A0A151IN16   A0A151IXT1   A0A1Y1NAZ4   J9KNF9   A0A1B0DHA7   A0A151IJ13   A0A1Y1KUU3   A0A1Y1KXB8   A0A1Y1K3Z7   J9LU41   A0A1B0DHV4   A0A151X5G2   X1XME1   J9L4L9   A0A151JB92  

Pubmed

28004739    20798317    28503490    24065732    25186727   

EMBL

ODYU01003321    SOQ41917.1    GEZM01099613    GEZM01099610    GEZM01099604    GEZM01099599    + More
JAV53268.1    GEZM01099608    GEZM01099605    JAV53264.1    GEZM01099609    JAV53257.1    GL441823    EFN64217.1    GEZM01077470    JAV63295.1    ABLF02011460    ABLF02033413    ABLF02012848    ABLF02012849    ABLF02012851    ABLF02007004    ABLF02007005    ABLF02008523    KQ977365    KYN03296.1    KQ977321    KYN03587.1    NWSH01000621    PCG75234.1    GEZM01031190    GEZM01031189    GEZM01031180    JAV84979.1    GEZM01031195    GEZM01031187    GEZM01031186    GEZM01031184    GEZM01031182    GEZM01031181    JAV84992.1    GGMR01004395    MBY17014.1    KQ982672    KYQ52446.1    GGMR01018395    MBY31014.1    ABLF02038040    ABLF02065516    ABLF02016100    GGMR01014547    MBY27166.1    NWSH01001223    PCG72048.1    ABLF02011489    ABLF02009662    ABLF02016193    GCES01153042    JAQ33280.1    ABLF02016252    GFAC01001507    JAT97681.1    ABLF02003302    KQ979651    KYN20001.1    HAAD01001124    CDG67356.1    ABLF02009087    HADY01024360    SBP62845.1    HADZ01019172    SBP83113.1    HAEJ01000494    SBS40951.1    AERX01031390    ABLF02033156    GGMR01015195    MBY27814.1    ABLF02015114    ABLF02003891    ABLF02003892    ABLF02003893    ABLF02003894    ABLF02014815    ABLF02014817    ABLF02066539    GEZM01060283    JAV71121.1    ABLF02013367    ABLF02015440    ABLF02057211    ABLF02032544    ABLF02032554    KQ981062    KQ980795    KYN09968.1    KYN13021.1    KQ977081    KYN05929.1    ABLF02042324    ABLF02062307    ABLF02067566    ABLF02056709    ABLF02067302    GL437635    EFN70236.1    ABLF02015299    ABLF02005485    ABLF02008676    ABLF02008677    HAEA01002407    SBQ30887.1    ABLF02019247    ABLF02019254    ABLF02003109    ABLF02024163    ABLF02065890    ABLF02066605    GEZM01007799    JAV94911.1    KQ976993    KYN06573.1    KQ980298    KQ978748    KYN13019.1    KYN16830.1    KYN28629.1    GEZM01007800    JAV94909.1    ABLF02010172    AJVK01060859    KQ977417    KYN02849.1    GEZM01073324    JAV65152.1    GEZM01073325    JAV65151.1    GEZM01095994    JAV55218.1    ABLF02031636    ABLF02031641    ABLF02031645    ABLF02031655    ABLF02046386    ABLF02048949    AJVK01061645    KQ982514    KYQ55617.1    ABLF02005824    ABLF02005825    ABLF02005826    ABLF02005827    ABLF02050516    ABLF02053731    ABLF02041912    KQ979155    KYN22412.1   

Proteomes

UP000000311    UP000007819    UP000078542    UP000218220    UP000075809    UP000078492    + More
UP000005207    UP000092462   

Pfam

PF12017   Tnp_P_element        + More
PF05485   THAP
PF14291   DUF4371
PF00076   RRM_1

Interpro

IPR006612   THAP_Znf        + More
IPR021896   Transposase_37       
IPR038441   THAP_Znf_sf       
IPR012337   RNaseH-like_sf       
IPR025398   DUF4371       
IPR001315   CARD       
IPR034772   CPSF6/7       
IPR000504   RRM_dom       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR034771   CG7185-like       
IPR035979   RBD_domain_sf       

SUPFAM

SSF53098   SSF53098        + More
SSF54928   SSF54928       

Gene 3D

3.30.40.180     3.30.70.330    

ProteinModelPortal

A0A2H1VM77   A0A1Y1JYF3   A0A1Y1JVC6   A0A1Y1K320   E2AQS3   A0A1Y1KU95   + More
J9KAE9   J9JZH0   X1X489   X1X5Z2   A0A151IJP2   A0A151IJM3   A0A2A4JUC7   A0A1Y1MGQ7   A0A1Y1MGQ8   A0A2S2NIL6   A0A151WXA5   A0A2S2PNR3   J9M688   J9LNJ4   A0A2S2PE11   A0A2A4JJZ8   J9KRW2   J9LRN9   J9JRC6   J9K966   A0A146NQI8   J9KWL5   A0A1E1XEX7   J9LWE0   A0A151J7W4   T2M5L7   J9K2S6   A0A1A8B8M0   A0A1A8CVN9   A0A1A8U049   I3JY54   J9JUB1   A0A2S2PEK2   J9LL83   J9KY26   A0A1Y1LE13   J9LWZ8   J9JS62   A0A151IXW5   A0A151IM28   J9KRT1   X1X8L8   E2A8K2   J9LVQ5   J9M2N4   J9LZ19   A0A1A8D9U5   J9JTA4   J9KVX0   A0A1Y1NAF9   A0A151IN16   A0A151IXT1   A0A1Y1NAZ4   J9KNF9   A0A1B0DHA7   A0A151IJ13   A0A1Y1KUU3   A0A1Y1KXB8   A0A1Y1K3Z7   J9LU41   A0A1B0DHV4   A0A151X5G2   X1XME1   J9L4L9   A0A151JB92  

PDB

2CQH     E-value=2.09063e-09,     Score=151

KEGG

101745047    K17391 insulin-like growth factor 2 mRNA-binding protein 1 | (RefSeq) insulin-like growth factor 2 m

GO

GO:0004803   GO:0006313   GO:0003677   GO:0003676   GO:0042981   GO:0016021   GO:0003723   GO:0000166   GO:0030286   GO:0006813   GO:0006810   GO:0009072   GO:0007169  

PANTHER

PTHR23204   PTHR23204:SF7  

Length:

647

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15831

Exp number, first 60 AAs:

0.00085

Total prob of N-in:

0.00188

outside

1  -  647

 

 

Pi

20.931331

Theta

17.57997

Tajima's D

0.822456

CLR

0

CSRT

0.618119094045298

Interpretation

Uncertain