Gene

KWMTBOMO00366  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000516

Annotation

PREDICTED:_insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(-):10940746-10965047      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.589

CDS

ATGTCTAATCCAATGGAGCAACAGTTCGAGCTTAATTTATCACAAGAGGACCATGATCAAATATTTGAACAAGACGATCTCCACGATCAAAGATCCTCAAAGGTACTCATCAGTGGGCTACCTCTGCATATCCGCTTCGATAACATCGAGCCACTGCTCTCACAGTATGGCAACGTGCAGCATTGCGACAAAGCCAACACCCGCGATCCCAACACCCAAGCGGTGTTCATCACCTTCGAGAGTCCAGAGCAGGCGCAGCAAGCCATAAACGGGTTGAATGGATGTGAATTGGAGGGTTGTCGTATAAAAGTGGAGGCAGCAGAGCAGAATGCTCGTGGAGGTCGTCGCGGTCGCCCTGGTGGCGGCCGTGGTGGAGGCGGCGCTGCTGGCGGTGGCTCGCGCCCCACCGACTTCCCACTGCGTCTGCTGGTGCAGAGCGACATGGTCGGCGCTATCATCGGTCGCCAGGGCAGTACCATTCGACTCATCACCCAGCAGAGTCGTGCTCGCGTTGACGTACACAGGAAGGATAATGTCGGCTCCCTGGAAAAAGCAATTACCATCTATGGGAATCCCGAGAATTGCACCAATGCCTGCAAGAGAATCCTTGAAGTAATGCAGCAGGAGGCCAATAATACTAATAAAGGCGAAATATGCCTGAAGATTTTGGCCCATAATAATCTCATTGGACGCATCATCGGCAAAGGCGGCAACACCATCAAGAGAATTATGCAAGAGACCGATACAAAGATCACTGTCTCCTCTATAAATGATATCAATAGCTTCAATTTGGAGAGAATCATAACCGTTAAGGGCTCCATCGAGAACATGGCCAAGGCGGAATCGCAAATTTCAGCCAAATTGCGTCAAAGCTACGAAAATGATTTGCAGGTGCTGGCGCCGCAAAGCATTATGTTCCCTGGGTTGCACCCAATGGCTATGATGTCGACTGGACGTGGTTTCTGTGGAGCTCCGCCACCGTTCCAGCCGCCGATGTATGCGCCGCTGGCCGGCCCTGGGGCACAGCAGGGTGCCGGTGACTCGCAGGAAACAACCTATCTGTACATCCCAAACAACGCTGTGGGCGCGATTATCGGTACAAAGGGCTCGCACATTCGCAACATTATTAGATTCAGCAATGCTTCTGTTAAGATTGCGCCTTTGGAACAAGAAAAGCAACAGGAACCGCAGAACCCACAGCAAGAGCGCAAGGTTACCATTGTCGGTAGTCCTGAGGCGCAATGGAAGGCGCAGTATCTTATCTTTGAAAAGATGCGGGAAGAAGGTTTTATGTCTGGATCGGATGACGTGCGGCTGATTGTGGAAATTGTCGTGGCCTCGTCGCAAGTGGGTCGGATCATCGGCAAAGGCGGACAGAACGTGAGGGAGCTTCAGCGCGTGACCGGCTCGCTGATCAAGCTACCCGAGCAGCAGCAGCAGCCCGGCTCGCAGGGACAAGAGCACGAGACCACCGTTCACATTGTGGGCCCCTTTTATAGCGTCCAGTCTGCGCAGCGACGCATCCGTGCCATGGTGGCGCAGGCGAGCGCGCCGGGACGCCGCCGCGCCGCGCAGCCCCCGCCCGTGCAGCAGTAG

Protein

MSNPMEQQFELNLSQEDHDQIFEQDDLHDQRSSKVLISGLPLHIRFDNIEPLLSQYGNVQHCDKANTRDPNTQAVFITFESPEQAQQAINGLNGCELEGCRIKVEAAEQNARGGRRGRPGGGRGGGGAAGGGSRPTDFPLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGSIENMAKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGAPPPFQPPMYAPLAGPGAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQEKQQEPQNPQQERKVTIVGSPEAQWKAQYLIFEKMREEGFMSGSDDVRLIVEIVVASSQVGRIIGKGGQNVRELQRVTGSLIKLPEQQQQPGSQGQEHETTVHIVGPFYSVQSAQRRIRAMVAQASAPGRRRAAQPPPVQQ

Uniprot

A0A2W1BI28   A0A212EY18   A0A194QUW5   A0A194PTG8   A0A0L7L7I0   H9ITD6   + More
A0A139WIL4   A0A1Y1N798   A0A182GJ16   U5EWF3   A0A182HC23   A0A139WI47   A0A0P6IX28   A0A1Q3G072   A0A1Q3G096   A0A1Q3G077   A0A1Q3G050   Q174K3   T1D3W6   A0A1Y1N760   A0A1J1J6D3   B4M2G9   A0A182LSY7   A0A1W4UNZ0   A0A1I8P5R7   A0A1I8MKW2   A0A182RAI2   A0A182KT96   A0A182P1F5   A0A182X068   A0A0Q5T3E7   A0A182HPL0   A0A182N3R4   A0A182YC90   A0A182JBB4   A0A182WD34   A0A1B6FVV0   A0A084WIY1   A0A1A9X576   A0A182QRV3   B0WBU9   R4WDQ2   A0A0Q5T5Z7   A0A1W4V184   A0A158NU30   F4WK49   A0A1I8MKW7   A0A151I4M8   A0A0R1EC75   A0A1I8P5M4   A0A1I8P5S9   A0A195DJL8   A0A151X023   A0A1B0FL37   U4U949   A0A0K8W218   M9NF14   A0A034VZ55   A0A026X2G9   A0A3L8DWB3   E9IRT0   A0A0M3QZ36   A0A182UJW1   K7J7K6   A0A3F2Z096   A0A0R1EJ14   A0A0Q5T351   W8BY82   N6THE1   E2C260   A0A0C9RYT5   A0A1B6FSQ9   A0A182S8Z5   A0A1A9XBV9   A0A0K8UZ75   A0A1B0B896   A0A034VWH9   E1ZZ14   A0A0A1WHJ7   A0A034W019   Q0KHU2   A0A1A9VRJ7   A0A034W0J6   A0A067RX66   A0A069DVP4   T1H969   A0A023FAG8   A0A224XE40   A0A2R7VU76   A0A2R7VTU5   A0A1A9ZGM2   A0A2P8YLL4   Q29GU3   A0A182KBX9   A0A195C988   A0A146LUH0   A0A1B6GML6   A0A2M4CQS7   E0VXF6   A0A154PTH1  

Pubmed

28756777    22118469    26354079    26227816    19121390    18362917    + More
19820115    28004739    26483478    26999592    17510324    24330624    17994087    25315136    20966253    25244985    24438588    23691247    21347285    21719571    17550304    23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    24508170    30249741    21282665    20075255    24495485    20798317    25830018    24845553    26334808    25474469    29403074    15632085    26823975    20566863   

EMBL

KZ150032    PZC74702.1    AGBW02011631    OWR46380.1    KQ461108    KPJ09323.1    + More
KQ459594    KPI96054.1    JTDY01002518    KOB71246.1    BABH01007153    KQ971342    KYB27607.1    GEZM01010855    GEZM01010851    JAV93763.1    JXUM01067178    KQ562437    KXJ75915.1    GANO01002972    JAB56899.1    JXUM01033215    JXUM01033216    JXUM01033217    JXUM01033218    JXUM01033219    JXUM01033220    JXUM01033221    JXUM01033222    KQ560981    KXJ80149.1    KYB27606.1    GDUN01000515    JAN95404.1    GFDL01001852    JAV33193.1    GFDL01001849    JAV33196.1    GFDL01001851    JAV33194.1    GFDL01001850    JAV33195.1    CH477409    EAT41502.1    GALA01001208    JAA93644.1    GEZM01010854    JAV93764.1    CVRI01000074    CRL07971.1    CH940651    EDW65873.1    AXCM01003862    CH954180    KQS29837.1    APCN01003264    APCN01003265    GECZ01015442    JAS54327.1    ATLV01023952    KE525347    KFB50175.1    AXCN02001101    DS231882    EDS42879.1    AK417739    BAN20954.1    KQS29840.1    ADTU01026256    ADTU01026257    ADTU01026258    ADTU01026259    ADTU01026260    ADTU01026261    ADTU01026262    ADTU01026263    GL888193    EGI65421.1    KQ976445    KYM86030.1    CM000162    KRK07051.1    KQ980794    KYN13078.1    KQ982638    KYQ53275.1    CCAG010022093    CCAG010022094    CCAG010022095    KB631923    ERL87146.1    GDHF01028931    GDHF01010265    GDHF01007193    JAI23383.1    JAI42049.1    JAI45121.1    AE014298    AFH07330.1    AHN59561.1    GAKP01011275    GAKP01011273    JAC47679.1    KK107020    EZA62482.1    QOIP01000004    RLU24068.1    GL765283    EFZ16735.1    CP012528    ALC48743.1    AAZX01002184    AAZX01008433    KRK07050.1    KQS29836.1    GAMC01004997    JAC01559.1    APGK01037933    KB740949    ENN77188.1    GL452067    EFN78011.1    GBYB01014490    JAG84257.1    GECZ01016539    JAS53230.1    GDHF01020418    JAI31896.1    JXJN01009884    GAKP01011276    JAC47676.1    GL435250    EFN73581.1    GBXI01015763    JAC98528.1    GAKP01011280    JAC47672.1    ABI30974.2    GAKP01011277    JAC47675.1    KK852409    KDR24489.1    GBGD01001018    JAC87871.1    ACPB03007560    GBBI01000231    JAC18481.1    GFTR01007162    JAW09264.1    KK854084    PTY10919.1    PTY10917.1    PYGN01000509    PSN45142.1    CH379064    EAL32016.3    KQ978143    KYM96736.1    GDHC01008292    JAQ10337.1    GECZ01006077    JAS63692.1    GGFL01003070    MBW67248.1    DS235830    EEB18062.1    KQ435095    KZC14648.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000037510    UP000005204    UP000007266    + More
UP000069940    UP000249989    UP000008820    UP000183832    UP000008792    UP000075883    UP000192221    UP000095300    UP000095301    UP000075900    UP000075882    UP000075885    UP000076407    UP000008711    UP000075840    UP000075884    UP000076408    UP000075880    UP000075920    UP000030765    UP000091820    UP000075886    UP000002320    UP000005205    UP000007755    UP000078540    UP000002282    UP000078492    UP000075809    UP000092444    UP000030742    UP000000803    UP000053097    UP000279307    UP000092553    UP000075902    UP000002358    UP000075903    UP000019118    UP000008237    UP000075901    UP000092443    UP000092460    UP000000311    UP000078200    UP000027135    UP000015103    UP000092445    UP000245037    UP000001819    UP000075881    UP000078542    UP000009046    UP000076502   

PRIDE

H9ITD6    Q0KHU2   

Pfam

PF00076   RRM_1        + More
PF00013   KH_1
PF08449   UAA

Interpro

IPR035979   RBD_domain_sf        + More
IPR036612   KH_dom_type_1_sf       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR004088   KH_dom_type_1       
IPR000504   RRM_dom       
IPR004087   KH_dom       
IPR009019   KH_sf_prok-type       
IPR028743   IGF2BP2       
IPR013657   UAA       
IPR003954   RRM_dom_euk       

SUPFAM

SSF54791   SSF54791        + More
SSF54928   SSF54928       
SSF54814   SSF54814       

Gene 3D

3.30.1370.10     3.30.70.330    

ProteinModelPortal

A0A2W1BI28   A0A212EY18   A0A194QUW5   A0A194PTG8   A0A0L7L7I0   H9ITD6   + More
A0A139WIL4   A0A1Y1N798   A0A182GJ16   U5EWF3   A0A182HC23   A0A139WI47   A0A0P6IX28   A0A1Q3G072   A0A1Q3G096   A0A1Q3G077   A0A1Q3G050   Q174K3   T1D3W6   A0A1Y1N760   A0A1J1J6D3   B4M2G9   A0A182LSY7   A0A1W4UNZ0   A0A1I8P5R7   A0A1I8MKW2   A0A182RAI2   A0A182KT96   A0A182P1F5   A0A182X068   A0A0Q5T3E7   A0A182HPL0   A0A182N3R4   A0A182YC90   A0A182JBB4   A0A182WD34   A0A1B6FVV0   A0A084WIY1   A0A1A9X576   A0A182QRV3   B0WBU9   R4WDQ2   A0A0Q5T5Z7   A0A1W4V184   A0A158NU30   F4WK49   A0A1I8MKW7   A0A151I4M8   A0A0R1EC75   A0A1I8P5M4   A0A1I8P5S9   A0A195DJL8   A0A151X023   A0A1B0FL37   U4U949   A0A0K8W218   M9NF14   A0A034VZ55   A0A026X2G9   A0A3L8DWB3   E9IRT0   A0A0M3QZ36   A0A182UJW1   K7J7K6   A0A3F2Z096   A0A0R1EJ14   A0A0Q5T351   W8BY82   N6THE1   E2C260   A0A0C9RYT5   A0A1B6FSQ9   A0A182S8Z5   A0A1A9XBV9   A0A0K8UZ75   A0A1B0B896   A0A034VWH9   E1ZZ14   A0A0A1WHJ7   A0A034W019   Q0KHU2   A0A1A9VRJ7   A0A034W0J6   A0A067RX66   A0A069DVP4   T1H969   A0A023FAG8   A0A224XE40   A0A2R7VU76   A0A2R7VTU5   A0A1A9ZGM2   A0A2P8YLL4   Q29GU3   A0A182KBX9   A0A195C988   A0A146LUH0   A0A1B6GML6   A0A2M4CQS7   E0VXF6   A0A154PTH1  

PDB

6QEY     E-value=9.0351e-50,     Score=498

KEGG

101745047    K17391 insulin-like growth factor 2 mRNA-binding protein 1 | (RefSeq) insulin-like growth factor 2 m

GO

GO:0003723   GO:0055085   GO:0016021   GO:0051124   GO:0042594   GO:0043025   GO:0003730   GO:0005975   GO:0030424   GO:0046427   GO:0007283   GO:0016322   GO:0048680   GO:0019955   GO:0071011   GO:0000398   GO:0005737   GO:0007399   GO:0071013   GO:0003676   GO:0000166   GO:0030286   GO:0006813   GO:0006810   GO:0009072   GO:0007169  

PANTHER

PTHR10288:SF93  

Length:

531

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0026

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00095

outside

1  -  531

 

 

Pi

15.57594

Theta

18.712368

Tajima's D

-1.142349

CLR

0.045104

CSRT

0.109544522773861

Interpretation

Uncertain