SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00365
Annotation
PREDICTED:_uncharacterized_protein_LOC106113719_[Papilio_xuthus]
Location in the cell
Mitochondrial   Reliability : 2.014 Nuclear   Reliability : 2.289
 

Sequence

CDS
ATGCCAATAAAGATGAAGAAAGACTTAAAGCTCGTAAGGTATGGAGTCGATGGACTAACTATTGAACATTTAAATCATCCAAATTCTCTTCTAGCCACAAGAGACAATCAACAGAAGAATGGATCGAAGCCAGAGGCTAAGGATATTTCAACATTCCCAACGAATATGAATTCCTTTTGGATAAACAAGCCCATCTCACATCTTTCTCAATATGATGGCTTGCAGAAACGCACTGCATTCAGACCACCACACAAATTAACAAGACTATCTAAAACTTTTTCATACGATTTTGAACCCATATTCAATAAGGGATCTTTTGAACCTTTCGAACGTCGACGAAGACCTGTCACTCTAGTGGCTTTTAGAAAAAATGGTTTCGTTCCACGAAGGCTCGCAAAGATTGTTGAGAACACACCATTGGAAGTAGCAGAACTTCAGTCTCCGTTTAACGAAGTGAGCGATATCTGGCAGCAAGAACCCGATGAATAA
Protein
MPIKMKKDLKLVRYGVDGLTIEHLNHPNSLLATRDNQQKNGSKPEAKDISTFPTNMNSFWINKPISHLSQYDGLQKRTAFRPPHKLTRLSKTFSYDFEPIFNKGSFEPFERRRRPVTLVAFRKNGFVPRRLAKIVENTPLEVAELQSPFNEVSDIWQQEPDE

Summary

Pfam
PF00090   TSP_1
Interpro
IPR036383   TSP1_rpt_sf        + More
IPR000884   TSP1_rpt       
SUPFAM
SSF82895   SSF82895       
Gene 3D
ProteinModelPortal

Ontologies

Topology

Length:
162
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.25696
outside
1  -  162
 
 

Population Genetic Test Statistics

Pi
21.250671
Theta
14.608634
Tajima's D
1.04482
CLR
1.044138
CSRT
0.681865906704665
Interpretation
Uncertain
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