Silkworm Genome Informatics Database

Gene

KWMTBOMO00357

Annotation

PREDICTED:_nascent_polypeptide-associated_complex_subunit_alpha?_muscle-specific_form-like_[Bombyx_mori]

Location

Bomo_Chr1(-):10816623-10819247 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.69

CDS

ATGTCTGGGGGGACATCACCCCCCATTATCAGCACCCCCGGCCCGTCCCGTAAGGGACGCCAAGTTATGTCGAGTCTAAGATTCAGACCAGCACCAGCAACCCGTACAGTCTCGATGGGACTCGGGACGGACAGCCGGCCCGGGCCTCCGGTCGCGGCCCAAAGGACTCCGAGGATCGAACCGGAGGAAGATGTCCTTCCCCCGTTGACCGATCCCTCTGGGCCCTCTCGGCCGCGGAAGAAGGCCAGGTCCGAGTCTGACCGAGGCTCATCGAGCGAAAAGGACAAGCGTCCTAGAATAGGCCCCTCATCTAGATCGGAGGGAGAGGAAAGTGCGACCACATCCTCTGCACACTCCTCAACCGAATCGGTCACTCCTTCCTCGTCTAGGTCTTCGTCCCCCTCTGGGAGTCCAATCCCAGTTCAACCAATTCCGAAGCCTAGGGCTCCCGCCAGGACAGGGACAGCCCCAAGGCAAGTAAGATCCCCTCCTCGCTCTCCTTCCCCAACGCTATCTCCAATCCCGGTAGACTCAACCCGAGGTGCCCCCGCCCTAAGCGGCACGGCGGGCAACCTGGATTCGACCAGGTACATGGACCTCGAGTCTACCAGACCTCAACAAGCCACTAAGCCCAACCCCACTCCCTCCACCTCCTATGCTGCCATGGCAGCTAGGCCAGGTATCCCTACCGCCCAGAGGACTTCCCAATCCTCACGAGTCCCTCCCCCGAGGCCGAAGGGTCGCGCCCAGGAGGAACTGCGCCGACACCCGCCAATTATGGTGGAGGCCCTCCCAAATTGGTCCCGCCACATGGCGGCCATTAGGGAGCGCCTAGGCCGCGCCCCCTCGGTGCGACCCTTCGGCGCCGGTTTCAGATTTCTGCCGACGTCGGCTGAGGAATATAGGGCGGTCCAGGCCTACCTGTCGGAGGCCTCTGCCAGGGACGGTACCATTAAATGGTACTGTTACGCCCTGGCGGAGGAGATGCCTTCGAAGGTGGCGGTCCGGGGCCTCCCTGCCGACACCGACGAGGCAGAAATAGTCAATGCCCTGAAGGAGCTGGGATTCCCGGCTCGATACGCCAGGTGCATTAGGTCCCGGAGAGGGCGTCCGGGCTGCGTTTTTCACGTAGCCCTGGACCACCTCTCGAAGGACGACCTCGCCCGCTTGTACGCAGTCAACGAACTGCTGTACCTGCCGGGGGTGACGGTCGAAGGATGGCGTCCAATCCGAGGGCCTGCGCAGTGTCATCGCTGCCAGGCCTTCGGACACGCCTCCTACAACTGTCATCGCGCGGTCCGTTGCGTAAGGTGTGCCGGGGAGCACATCGTAGCGGACTGCCCGAGGCCGAGGGACGGCCCGTTCTCCTGTGCCAACTGCGGGAAGGACCACGCCGCCGTCGACAGACGGTGTGCGGTCTTCCGCAAACGGGCCAGGATGATGGGAGCAACCGTCCCCCCTCCTGCACCACAGGCACCTCGAGCCGGGAGTGCAGCTCTTCCGGCTTCAATACCTGTAGCAAAGGGGAAGGGGAAGGGGAAAGGGAAAACTTCCCAGCCCCCTCCCCCATCCCACTCCGCTCCGTCTGCTGTGGTGGTGGAGGCACTGCCATCGGCGCCTACGCTGATGGCACAGGCCAACCCACCACGGCGGATAAATAAACCCAAACCCACTCCTGCTCCCCGTGGTCGTACATCTGCTGGTATATCAGTGCCTAAACCACTCCCGACTAGCGGCCCTACGTCCACTAAAAGGGAGAAGAACAAGAGGAAAAAGGCCAAAAGGAAAACAAGAAAAAGGGAAGAAAGAGAGAGACTAAGGGGTACATCTGAACCCACAGTGCCAGAACCCCAACAAACCAACACAGAAACCATGGAGGTCTCCGAGGCCCCCCTTACTGCCCAACAACCGACATCAAGCCAACCACTGCCTACAGCCCATCCGGCCGAAGGCAAGCACGACTTGAACAACCAGCCCCCCCTCCCCCCCCGCCCTCAGCGCGAGCGCCGCAGCGGTCGACAGGCCTCCCAGCCTGCCGGCTTTGCTGCATGGCTGCTCGCACTGTGGGAGAAATTGTCCGAGGTGATCTCCGGAGTAATCCGTGAGATCGCCTCGGGAGCCAGTCCCTTCGGGGCGCTCCTGTCGGGGTTCTACCGAATGATTGCGCAGTTCAATGGCTAG

Protein

MSGGTSPPIISTPGPSRKGRQVMSSLRFRPAPATRTVSMGLGTDSRPGPPVAAQRTPRIEPEEDVLPPLTDPSGPSRPRKKARSESDRGSSSEKDKRPRIGPSSRSEGEESATTSSAHSSTESVTPSSSRSSSPSGSPIPVQPIPKPRAPARTGTAPRQVRSPPRSPSPTLSPIPVDSTRGAPALSGTAGNLDSTRYMDLESTRPQQATKPNPTPSTSYAAMAARPGIPTAQRTSQSSRVPPPRPKGRAQEELRRHPPIMVEALPNWSRHMAAIRERLGRAPSVRPFGAGFRFLPTSAEEYRAVQAYLSEASARDGTIKWYCYALAEEMPSKVAVRGLPADTDEAEIVNALKELGFPARYARCIRSRRGRPGCVFHVALDHLSKDDLARLYAVNELLYLPGVTVEGWRPIRGPAQCHRCQAFGHASYNCHRAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGATVPPPAPQAPRAGSAALPASIPVAKGKGKGKGKTSQPPPPSHSAPSAVVVEALPSAPTLMAQANPPRRINKPKPTPAPRGRTSAGISVPKPLPTSGPTSTKREKNKRKKAKRKTRKREERERLRGTSEPTVPEPQQTNTETMEVSEAPLTAQQPTSSQPLPTAHPAEGKHDLNNQPPLPPRPQRERRSGRQASQPAGFAAWLLALWEKLSEVISGVIREIASGASPFGALLSGFYRMIAQFNG

Uniprot

NA

ProteinModelPortal

NA

KEGG

101740860 no KO assigned | (RefSeq) putative uncharacterized protein DDB_G0290521

GO

GO:0003676 GO:0008270 GO:0030286 GO:0006813 GO:0006810 GO:0009072 GO:0007169 GO:0016021

Length:

726

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.33584

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1 - 726

Pi

29.550066

Theta

38.354219

Tajima's D

-0.644455

CLR

0.007616

CSRT

0.209839508024599

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree