Gene

KWMTBOMO00336  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000528

Annotation

PREDICTED:_eukaryotic_translation_initiation_factor_4_gamma_3-like_[Bombyx_mori]

Location

Bomo_Chr1(-):10251280-10265998      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.149

CDS

ATGTCTGGTACACGAGCGAATACTCAGAAACACAGTCGCAGGCTTGCAATCATTCACCCTGTTACACGTCACAATATACTAACCGAAATTTGTTCTAACGATAATTATGTTAATGACACCAATGATAGGCAAACACCGCAACCCGAACCAACGCCTAATTTTGCTGAGGAATTTAATAGAAGAGTTTATGAAGTCGCTAAACAACCTAGTGATAGTGTAACGAAAACGAACGTGACAAAGAATGTCGAATTGCCAATATCTTCCATGAGTAACGTTCTATCTCAATCAAATGCAATAAATTATACTAATAGTGATACTAATGAAAATATACCTCTTAAGCAACACAAAAGCAAAAACGTGCCTCAAATTGAAGATTTTGATAAATCGTCTAATAATATTAGTGTAAATAGCATGAATTCAGCTGCGAATACTAGTTTATTGCAACCGGTGTCTTCCTTTACAAACAACATAATGGGAGTCCACCATAATGCGCCTGTTCAAGCAGTTGCTCCTGTAATGTCAATACTCACGCCTGTAACCGTCCCAGCGCATTCTCAGACTATTGTTACTCCTACAAATACACAAGGAATGTGTCCCTCCTATTTAAATACTCCACAAAATCAAATAATACGAGAAACTAAAGAACGATTGAAATCTGAAGAACAAGAAAGAATTGAATACGACACAACTAATTTAGAAAAAGAAACTTCGTTCACAACCATTAGATCTAATGGCCCTGCATCTTTAGTGATTAGTTCAGTTGATAGTTTATCAAATACTACCAACCCTCCAACTAGTCAAAAAATTATAAGTGAAGAATCAACGAAAAACATAGAAATTGTTAATAAAATTATCAACCAAGAAACTGAAACTACAGTTGTTGAACCTAAAACTGAGGTGTTAACGAATAAAACGAAGACTCACATTGATAATACTAATCCTAAAATAACTCAAGAGCCTTTATCAAGTTTTGAAAATATTATTAAAATACCAGGCTCTGAACTTGATAACAAAGAAACATCCAGTGCATTTGATGCTCAGACAAAGTTGACCCAAAGTATATCAAGTGTTTTACGGGTCCAACAACAATCTGACTGTAAAATGAAAGATATTAATCTTAATAGTAAGGCTACAGATCCTGACAAAGCTAATGGAAATACTACTGAACCTTTAAGCGAAACTACTAAAGAAGACCTGAATAAAAATGATAAAGCCTTAAAAAATCAAAAGAATAATAACAAAAAATCAAAGAAAATGGCCAATAATAACAAAGAATCAGAGTCCTATGAAAATGGTAAAGATGAGACTGATAAAGTAGTTAATATAGAAGACACCTTGAATGAGGAGTCTGAAGCTAAACCAACAACTGAGAAAATTGAGGCTCCACCAGCACAACCTGTATTTATTCCTAAATACAAGTATAGTGAAGATCAATGGTCTCCTCTGAATAAATCTGGAAAGAAATGTTATGATATTGATTTTTTGAAACAAATAAAGGAAGATCCTCTGTCCAAAAACAAACCAGAGGCTCCGTTGTTGGAAGCTTGCAATGTCATACGAACTACACCAATGTTGGAACCCCTGCCTTTTGCTAATATTTCAAGACCATCAAGTGATAATTTCTTCCCCTTTGGTAAGAGTTCTGGCTTGGGTTCAAGAAGCAATACTCCTCGTGATATAAAGAGAGAAGGTAGAAATATGACACCAAGTGGACGTGGAAGCATGAAATTACCTGCTACAGCTAGTGGTAGCAATCCCCACAAACCTGTTATTCATGTTTGTCTAAATGATGATGTGAAATTAAATGAGTCTGATTCTGCTTGGCGACCTACTAGATATGTTAGAGCAGAAAATGCAGATGAAGAAGAAGTGAAAACGCAGGAACTATATAAGAAATTCCGAGGGATTTTGAATAAGTTAACACCCCAGAAATTCGACACTTTACTGGATAAAGTGAAAGCTCTTGATATTAACAACCAAAAACGACTCGAAGGAGTTATTGATTTGGTATTTGAAAAAGCAATTGAAGAGCCTAATTTTTCCAAAGCTTATGCTGCCATGTGCCATAAGCTGTCCAAACTGAAGGTTCCTGCTGACAACCCAACGAGACCTGATGAATGTGTCAATTTCAGAGCCCTCATTATTAATAAATGCCAAAATCAGTTTCAAACCGATAAGAGTAATGAACAAGTAATGAAACTAGAGAAAGAAATGACAGAATGCTCTGATCCTGCTAAGAAAAAGGAAATACAAGCAATGATACAAGAGGAGCATAGGCGTATTAGGATGAGATCTGTAGGAAATGTACGATTTATTGGTGAATTGTACAAATTAAAGATGTTGGCTGTAAAGATTATGGAATATTGTATGAATTATTTGATTGATATATTGGAGGAAGAGAAATTGGAGTGTCTTTGCAAATTGCTCACAACCATTGGTGAACAAATTGAAAATGAGCCACAGGATCATTTAGATCCCATTTTCAAGAAAATGCAAGATATTGTCGATCGTAGATCTAACAAAATTAGTAGTCGTGTAAGATTTATGATTCAAGACGTTATTGAACTTCGAAAAAGGAAATGGGTCACAAAAAGCGTAATAGATACTCAGCCTAAAATGATGGACCAGATCCAGAAAGAAGCCGAGCAACAACAACGTCATATTGAGCTGATGAATGCTAATCCCATGGGAGGCTTTCGACGTGACGATGGAGGGCGAGGAAAACGTGGCGGCGACAACCGAAGACAAAATACTAACCCTTACATGGATAATAATTGGAAAACGACAAGAACTAATTTTGCTGTGGATACTTCAAAACTAAAAGCCGTGTCACAGAAGGGTATGCCAATCAAGCTGGCTCCACACAACTCTGGATGGAACCATGGTTCGGGCACAAAAAATACCGCCCAGGCGGCTGGTAGTAGTAATTCAATGATAAGCTTGACTAAAAACATGTACAGCATTTTAGAGAATGTGTCGACTGAACCAACTTCCCTCAGAGGTACTCAAGACCTAACACCTACTTATCATTCTAAAGGAGCATCTATTGAGCGATCCACATTTAATTCAAGACCTGAATTTAGTGCAACCCCAGGTAATCGCTCTGATTCAATGGGACTTGGTCGCTCTAGTTCAGGTACTCGTAGTACAAGTGCTACAACAACACCTGCACCTGCTCCTACAGAAAATGTGCAACCTCTGAATGCTCCAGTACCGCAGGAGCCCATTAGCGAAGCCAAGAAAGGATCTGTCAAGTCTATGATTGATCTTTGTCTCATACACGCATACTATGATGAAATGATTGTGGAATTTAAAGATGTGTTCAAACCTGAAAATCATGCTGCTGTAATAAGTGAAATATTCAATATAGCATTAGACAGGTCAGCAAAAGAGATAGAAATGATTGTGAATATTGTACAATTGTTGGTATCAACAAATACTGTCTCACCAGATAATTTACTAGAAGGCATGAAAGAAACATTTGATTGTGCACCAGATTTGTTTATAGATATTCCCATGCTGTACAATAATTTAGGCAAATTTGTAATGCCACATATTGAAAAGAAGCATATCACATTTGTGCAGTTGTTTAAACTGTGTAACACAATAGTATCATCAAATCATGGGCATTTATTACTAAAAGCTATAATTAAAGAATTAAAAGAAAGTATGGGACCTAAATTTGTCAAGAGTAAATGGCAAGAGTCCAACTTGAAATTGGAACAGTGGATGAATGAGGATCAGGTTTCAAAATGGATTGAAGATAACCATTTCGAATTCCTTGAAGGTGATGTCAAGTCTAGTGAGGAAGAAAATAAGAAAATTTTATCACCATCACAGACACAAGATAAATTACTGCAACTTATGAATACTGATGAAAGTTGTGAATGTATAAAAGGATGGGTACAGGATAAATTTGGAAAATCATCCAACGAAGAATGGTTTATGCGGTCTCTCATACAAGCTATTTGTGAGCACGCCTTATTTGGTCCAGAGAGACGAGATGTGCCACATTTTAATCGAGACCGTATGAATAAATATGCTAGCCTCATTCAAGACTTTGGAGAGACCAAACAAATTAGAGAAGCAATTTGTTTATTTGGCATACAACAACTTATACACAAACTAGAGCACCCCCAAGGTCTATCATTAGAAATTTTCCAATATCTTCATGATCAATACATCATCTCTTTAGATGGTTTTATAGCTTGGTGGGAATCTGACAAAGAGCCAGAAGGCAAAGGTGTAATGATGAAGGCGTTGACATCGTTCTTCATGAGTATCAAGGCAGAAGTGGAAAACGAAGATTCTTGCAGCGAGGACTGA

Protein

MSGTRANTQKHSRRLAIIHPVTRHNILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISSMSNVLSQSNAINYTNSDTNENIPLKQHKSKNVPQIEDFDKSSNNISVNSMNSAANTSLLQPVSSFTNNIMGVHHNAPVQAVAPVMSILTPVTVPAHSQTIVTPTNTQGMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTNLEKETSFTTIRSNGPASLVISSVDSLSNTTNPPTSQKIISEESTKNIEIVNKIINQETETTVVEPKTEVLTNKTKTHIDNTNPKITQEPLSSFENIIKIPGSELDNKETSSAFDAQTKLTQSISSVLRVQQQSDCKMKDINLNSKATDPDKANGNTTEPLSETTKEDLNKNDKALKNQKNNNKKSKKMANNNKESESYENGKDETDKVVNIEDTLNEESEAKPTTEKIEAPPAQPVFIPKYKYSEDQWSPLNKSGKKCYDIDFLKQIKEDPLSKNKPEAPLLEACNVIRTTPMLEPLPFANISRPSSDNFFPFGKSSGLGSRSNTPRDIKREGRNMTPSGRGSMKLPATASGSNPHKPVIHVCLNDDVKLNESDSAWRPTRYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLLDKVKALDINNQKRLEGVIDLVFEKAIEEPNFSKAYAAMCHKLSKLKVPADNPTRPDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEMTECSDPAKKKEIQAMIQEEHRRIRMRSVGNVRFIGELYKLKMLAVKIMEYCMNYLIDILEEEKLECLCKLLTTIGEQIENEPQDHLDPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRKRKWVTKSVIDTQPKMMDQIQKEAEQQQRHIELMNANPMGGFRRDDGGRGKRGGDNRRQNTNPYMDNNWKTTRTNFAVDTSKLKAVSQKGMPIKLAPHNSGWNHGSGTKNTAQAAGSSNSMISLTKNMYSILENVSTEPTSLRGTQDLTPTYHSKGASIERSTFNSRPEFSATPGNRSDSMGLGRSSSGTRSTSATTTPAPAPTENVQPLNAPVPQEPISEAKKGSVKSMIDLCLIHAYYDEMIVEFKDVFKPENHAAVISEIFNIALDRSAKEIEMIVNIVQLLVSTNTVSPDNLLEGMKETFDCAPDLFIDIPMLYNNLGKFVMPHIEKKHITFVQLFKLCNTIVSSNHGHLLLKAIIKELKESMGPKFVKSKWQESNLKLEQWMNEDQVSKWIEDNHFEFLEGDVKSSEEENKKILSPSQTQDKLLQLMNTDESCECIKGWVQDKFGKSSNEEWFMRSLIQAICEHALFGPERRDVPHFNRDRMNKYASLIQDFGETKQIREAICLFGIQQLIHKLEHPQGLSLEIFQYLHDQYIISLDGFIAWWESDKEPEGKGVMMKALTSFFMSIKAEVENEDSCSED

Uniprot

A0A3S2N809   A0A2H1WX92   A0A1E1WGQ1   A0A212F455   A0A2W1BL87   A0A194QUY2   + More
A0A194PY80   A0A0T6AWR9   A0A2P8YCJ2   A0A0M4N086   F4WWB9   A0A0C9QV10   A0A0C9QLR5   A0A0C9PSZ6   A0A0C9QV09   A0A195B0Q1   A0A0J7L706   A0A151JB07   A0A151WS26   A0A151IJU3   E2A3Q2   A0A195FBI6   A0A411G7Y1   E2BTT6   A0A293N1K9   A0A140D2S1   A0A293MLV1   A0A1Z5KWT2   A0A3Q2CDR2   A0A224Z6L5   A0A3Q0J5Y0   A0A1A8A7A1   A0A1A8IH22   A0A1A8HRI3   A0A1A8DB46   A0A1A8TXX9   A0A1A8F031   A0A1A8EZ12   A0A1A8HV33   A0A1A8FI10   A0A3R7PWX2  

Pubmed

22118469    28756777    26354079    29403074    21719571    20798317    + More
28528879    28797301   

EMBL

RSAL01000227    RVE43945.1    ODYU01011748    SOQ57668.1    GDQN01008300    GDQN01004870    + More
JAT82754.1    JAT86184.1    AGBW02010446    OWR48502.1    KZ150102    PZC73490.1    KQ461108    KPJ09277.1    KQ459594    KPI96105.1    LJIG01022637    KRT79506.1    PYGN01000705    PSN41963.1    KR075860    ALE20579.1    GL888406    EGI61461.1    GBYB01004492    JAG74259.1    GBYB01004489    JAG74256.1    GBYB01004488    JAG74255.1    GBYB01004487    JAG74254.1    KQ976692    KYM77872.1    LBMM01000436    KMQ98358.1    KQ979182    KYN22331.1    KQ982805    KYQ50475.1    KQ977294    KYN03904.1    GL436457    EFN71944.1    KQ981693    KYN37783.1    MH366220    QBB02029.1    GL450531    EFN80835.1    GFWV01021948    MAA46676.1    KT694364    AMK01816.1    GFWV01021949    MAA46677.1    GFJQ02007646    JAV99323.1    GFPF01012733    MAA23879.1    HADY01011906    SBP50391.1    HAED01010205    SBQ96417.1    HAED01000852    SBQ86697.1    HAEA01003035    SBQ31515.1    HAEJ01000512    SBS40969.1    HAEB01005940    SBQ52467.1    HAEB01005239    SBQ51766.1    HAED01002401    SBQ88246.1    HAEB01011936    SBQ58463.1    QCYY01003856    ROT62049.1   

Proteomes

UP000283053    UP000007151    UP000053240    UP000053268    UP000245037    UP000007755    + More
UP000078540    UP000036403    UP000078492    UP000075809    UP000078542    UP000000311    UP000078541    UP000008237    UP000265020    UP000079169    UP000283509   

Pfam

PF02854   MIF4G        + More
PF02847   MA3
PF02020   W2

Interpro

IPR003890   MIF4G-like_typ-3        + More
IPR016021   MIF4-like_sf       
IPR003307   W2_domain       
IPR003891   Initiation_fac_eIF4g_MI       
IPR037584   EIF4G1       
IPR016024   ARM-type_fold       
IPR037585   EIF4G3       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.40.180    

ProteinModelPortal

A0A3S2N809   A0A2H1WX92   A0A1E1WGQ1   A0A212F455   A0A2W1BL87   A0A194QUY2   + More
A0A194PY80   A0A0T6AWR9   A0A2P8YCJ2   A0A0M4N086   F4WWB9   A0A0C9QV10   A0A0C9QLR5   A0A0C9PSZ6   A0A0C9QV09   A0A195B0Q1   A0A0J7L706   A0A151JB07   A0A151WS26   A0A151IJU3   E2A3Q2   A0A195FBI6   A0A411G7Y1   E2BTT6   A0A293N1K9   A0A140D2S1   A0A293MLV1   A0A1Z5KWT2   A0A3Q2CDR2   A0A224Z6L5   A0A3Q0J5Y0   A0A1A8A7A1   A0A1A8IH22   A0A1A8HRI3   A0A1A8DB46   A0A1A8TXX9   A0A1A8F031   A0A1A8EZ12   A0A1A8HV33   A0A1A8FI10   A0A3R7PWX2  

PDB

1HU3     E-value=1.11802e-53,     Score=536

KEGG

101742358    K03260 translation initiation factor 4G | (RefSeq) eukaryotic translation initiation factor 4 gamma

GO

GO:0003743   GO:0003729   GO:0000339   GO:0005488   GO:0003723   GO:0005515   GO:0007018   GO:0030286   GO:0006813   GO:0006810   GO:0009072   GO:0007169   GO:0016021  

PANTHER

PTHR23253:SF10   PTHR23253:SF23  

Length:

1441

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03084

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00137

outside

1  -  1441

 

 

Pi

2.926292

Theta

4.992645

Tajima's D

-1.341845

CLR

0.006429

CSRT

0.0727963601819909

Interpretation

Uncertain