SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00335
Pre Gene Modal
BGIBMGA000700
Annotation
PREDICTED:_uncharacterized_protein_LOC106133924_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.661
 

Sequence

CDS
ATGGGAGCATCGATGCCAATGGTTACCAAGGCGACAGTATATTTTATAAACAACACGAAGCCAGACATCATCGAACAGTTTTCAAAGATGATGACTGATGAAGAAAAATCGAAAATAGCGAAACTACTACATGATGTCGCTGTCAAAGAAAATCAATTACCTGAACGTTGTTCTGGTCTTGTAAAAGATATTCGGGAAAAGTTCGGTAAAGATTCTAATGAAGACGAGGACAAAGTCGAATCCGTTGACGAAACGTATGAAAATCCATACATAGTTGATAAATCACAACTTGAAGAAATAGAAAGGAAACTGGAACCATTGATGTCAAAAAATAAAAGAAATAGTGTAGCGTCTCCTAATCTAATAGGCCACGAGTCAGATCCTAAGCGGCCATGGCGAACCAACTCCAATAAAGAAAAACTGCTCCGGATCGACAACGAGCTAAAACGACACTTGGACAAAGCTACAGACCTGATCGCCCCTTTGTCGGATGGAGAAATGAGTGATATAATAAAACAAAGTCGAGAAGAATCTATTACGACACGCCCTGTCGAGTATGTCCGACTGGTAGATACTGTAGAGGAAGCAAAGAAAACTTTATTTAATTTTCAGTACAGAGCTGTTTGCAATAGTACTGCGACGGCGATATTACGAGAGGCGCACGCACCAGTTGATCAAAACGAACCTCATAAAATCTAG
Protein
MGASMPMVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESDPKRPWRTNSNKEKLLRIDNELKRHLDKATDLIAPLSDGEMSDIIKQSREESITTRPVEYVRLVDTVEEAKKTLFNFQYRAVCNSTATAILREAHAPVDQNEPHKI

Summary

Interpro
IPR032675   LRR_dom_sf       
Gene 3D

Ontologies

GO

Topology

Length:
232
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00039
Exp number, first 60 AAs:
5e-05
Total prob of N-in:
0.05753
outside
1  -  232
 
 

Population Genetic Test Statistics

Pi
4.454586
Theta
11.125582
Tajima's D
-1.662299
CLR
2.637319
CSRT
0.0385980700964952
Interpretation
Possibly Positive selection
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