SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00333  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000529
Annotation
PREDICTED:_neutral_endopeptidase_24.11_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.104
 

Sequence

CDS
ATGAGAAACAACGTAAAGCAATCGTTCTGGCGACCTCGCACTGACGCTGAGAAACGATGGATGATGATAGCTGGAGTGGCCGCAGTGCTCGCCGTCGCGTTCTTGGCAGCCTTCATCGCCAGCCTTCTCCTACGAACAACCAGCGACATAAGCGTGGTCGCCCGGGGATCAGATGACGTGGAAACGTGTAGCGCACCTGGGTGTATCCATACAGCCTCAAGACTCCTGCTGAATATGGATGAAAAAGTAGACCCATGCGACAATTTCTACGACTTTGCTTGCGGGTCATTCTTGAAAAATACTAGGATCCCAGACGACAAGACCTCAGTGAACACGTTTTCAATTATCACTGATCAACTCCAAGAGCAGATTCGGTCACTTTTAGACGAACCAGTCACTCCTGAAGAGCCGAGACCATTCGTGCTCGCCAAAACCTTGTACCAAGCTTGCATGAACAGAACTGCCATTGAAGCTCGAGGTGTCCAACCATTGCTGGATATGCTGAAACGGCTCGGAGGTTGGCCTGTACTTGATGGTCAGTCATGGGACGAGAACTCATTTTCTTGGGAGCAATCGGTGTACAAATTCAGAGATGCCGGTTACTCCGTCGATTACTTCCTCGATTTCTCTATCAGCGTGGATGTTAAAAATTCAACGAGACGAGTCATTGATCTGGACCAGGCCTCGCTCGGATTAAGCCGCGAGTACCTGAACCGCGGCTTCAGTGATAAATTGGTACAAGCATACTATGAGTACATGGTCGATATCGCTATACTCCTTGGAGCTGATAAGACAAAGGCTACAGAAGAACTTAAAGAATCACTGCAATTCGAAATGAAATTAGCCAACATTTCGTTACCTCTGGAAAAACGTCGTAACGCAACGAGTCTCTACAACCCTATGACCATTGCTGAACTTCAACAGAAATTCCCCAAGGTTCCGTGGTTGGAATACATCAACAGACTGCTTGCGCCACACATTACGGTCGATGTTAATGAACTTACCATTGTCAGCGTACCCAAATACATCACCGATCTTGAGGCTTTACTGGAGAAGACTCCTAAACGTGTACAAGCTAACTACGTCATGTGGAGAGTTGCCGGGGCATCAGTTTCGTACCTAACTGACGATCTGAGGAGACGACAATTGGCCTACATCACAGCTTTGTCAGGAAAAACTGAACGCGAGAGTAGATGGAAAGAATGCGCCGATACGACCAGTGCTAGCATGTCCATCGCTGTAGGGGCGCTGTACATCAGGAAATATTTCAATGAAAACTCAAAGGCGAATGCTTTAGAAATGGTCAATGATATCAGGTAA
Protein
MRNNVKQSFWRPRTDAEKRWMMIAGVAAVLAVAFLAAFIASLLLRTTSDISVVARGSDDVETCSAPGCIHTASRLLLNMDEKVDPCDNFYDFACGSFLKNTRIPDDKTSVNTFSIITDQLQEQIRSLLDEPVTPEEPRPFVLAKTLYQACMNRTAIEARGVQPLLDMLKRLGGWPVLDGQSWDENSFSWEQSVYKFRDAGYSVDYFLDFSISVDVKNSTRRVIDLDQASLGLSREYLNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLLAPHITVDVNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLRRRQLAYITALSGKTERESRWKECADTTSASMSIAVGALYIRKYFNENSKANALEMVNDIR

Summary

EMBL
AB048208    BAB33300.1    BABH01007095    BABH01007096    NWSH01000486    PCG76064.1    + More
PCG76063.1    AF413063    AAO21504.1    MH298329    AWK67618.1    ODYU01006558    SOQ48505.1    RSAL01000227    RVE43942.1    GDQN01007734    JAT83320.1    AGBW02010446    OWR48508.1    GAIX01012266    JAA80294.1    KQ461108    KPJ09289.1    KQ459594    KPI96089.1    KQ414672    KOC64187.1    KQ971343    KYB27447.1    KYB27446.1    GBYB01007566    JAG77333.1    GBYB01014266    JAG84033.1    KQ435774    KOX75065.1    APGK01034174    APGK01034175    APGK01034176    APGK01034177    APGK01034178    KB740904    ENN78462.1    KU245762    AND99761.1    KK107496    EZA49818.1    QOIP01000004    RLU24088.1    DS235870    EEB19488.1    MF189027    AWI63381.1    GL439090    EFN67881.1    KZ288217    PBC32410.1    KQ434824    KZC07350.1    KB632006    ERL87973.1    GL765283    EFZ16711.1    GEZM01094022    JAV56000.1    GEZM01094024    JAV55998.1    NEVH01000611    PNF43276.1    GEZM01094023    JAV55999.1    GEZM01094021    JAV56001.1    NNAY01000760    OXU26642.1    KQ980368    KYN16324.1    KK852675    KDR18716.1    KQ976533    KYM81493.1    LJIG01001105    KRT85835.1    KU932343    APA33979.1    ADTU01026577    ADTU01026578    ADTU01026579    ADTU01026580    ADTU01026581    PYGN01000114    PSN53889.1    KU218675    ALX00055.1    GL888285    EGI63203.1    KQ978143    KYM96720.1    GFXV01003870    MBW15675.1    KQ981522    KYN40631.1    GGMS01016230    MBY85433.1    ABLF02019556    GGMS01006699    MBY75902.1    GL452067    EFN77995.1    GFDL01001550    JAV33495.1    GDAI01002525    JAI15078.1    AXCN02000208    AAAB01008987    APCN01005946    EAA01126.5    GFDL01001511    JAV33534.1    GGFL01004490    MBW68668.1    CH477621    EAT38188.1    LBMM01001992    KMQ95435.1    GFDL01001557    JAV33488.1    GFDF01001146    JAV12938.1    AXCM01000914    GFDF01001260    JAV12824.1    GFDF01001261    JAV12823.1    LNIX01000003    OXA57411.1    ATLV01017670    KE525181    KFB42373.1    JXUM01040714    JXUM01040715    JXUM01040716    JXUM01040717    JXUM01040718    JXUM01040719    JXUM01040720    AF483275    AAL91975.1    LJIJ01000490    ODM96912.1    UFQS01003165    UFQT01003165    SSX15299.1    SSX34674.1    GEDC01026857    JAS10441.1    GEDC01013803    JAS23495.1    GANO01002427    JAB57444.1    ADMH02001926    ETN60478.1    AJWK01026604    AJWK01026605    AJWK01026606    GAPW01000552    JAC13046.1   
Pfam
PF01431   Peptidase_M13        + More
PF05649   Peptidase_M13_N
PF08324   PUL
PF09070   PFU
PF00400   WD40
PF02020   W2
PF01873   eIF-5_eIF-2B
Interpro
IPR024079   MetalloPept_cat_dom_sf        + More
IPR008753   Peptidase_M13_N       
IPR042089   Peptidase_M13_dom_2       
IPR018497   Peptidase_M13_C       
IPR000718   Peptidase_M13       
IPR011989   ARM-like       
IPR036322   WD40_repeat_dom_sf       
IPR038122   PFU_sf       
IPR013535   PUL_dom       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR015155   PFU       
IPR016024   ARM-type_fold       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR016190   Transl_init_fac_IF2/IF5_Zn-bd       
IPR003307   W2_domain       
IPR002735   Transl_init_fac_IF2/IF5       
IPR016189   Transl_init_fac_IF2/IF5_N       
IPR016021   MIF4-like_sf       
SUPFAM
SSF48371   SSF48371        + More
SSF50978   SSF50978       
SSF75689   SSF75689       
SSF100966   SSF100966       
PDB
5V48     E-value=2.27145e-54,     Score=537

Ontologies

Topology

Length:
439
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.46918
Exp number, first 60 AAs:
22.44323
Total prob of N-in:
0.99595
POSSIBLE N-term signal
sequence
inside
1  -  19
TMhelix
20  -  42
outside
43  -  439
 
 

Population Genetic Test Statistics

Pi
19.312
Theta
16.076085
Tajima's D
-1.222666
CLR
0.110185
CSRT
0.0996950152492375
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 ANAIEMVNDIR 100.00 2e-08
29197581 ESIQFEMK 100.00 2e-08
26822097 IISEESTK 95.65 4e-08
29197581 YITDIEAIIEK 95.65 4e-08
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