SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00332  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000529
Annotation
PREDICTED:_neutral_endopeptidase_24.11_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.845 Mitochondrial   Reliability : 1.29
 

Sequence

CDS
ATGCGATACAGACAACAGTTTCGTAAGACTCTGACCAAGGTGGACTGGATGGATGATATGACTCGCCAAGAGGCTCTGGAGAAAGCTGATGCTATGGCTTCACACATCGCCTACCCCAGTGAAATGCTTGACAACAACAGACTCACCGAATTCTACTCTGGTCTGGAAATGTCATCGGAACACTTGATGGAGTCCGTGCTCAACTTGACATTGTTCACTACTGAGTACTTATTCGGTAAACTGAGGGAGCCCGTCAACAAGACTGACTGGGTCACCCACGGTCGCCCAGCTATCGTCAACGCTTTCTATTCGTCTATTGAGAACAGCATACAATTTCCGGCTGGTATCCTACAAGGAGCATTCTTCTCTGCCAAACGTCCTGCTTACATGAATTACGGTGCTATTGGTTTCGTCATTGGACATGAAATCACGCACGGTTTTGATGACCAGGGCCGGCAATTCGATAAAAACGGAAACCTTGTGGACTGGTGGCAGGAAATGACCAAAGAGAAGTATCTGGATAAAGCCAAATGTATCATCGATCAATACTCAAACTACACTGTTAAAGAAGTCGGATTGAAGTTGAATGGAGTGAACACACAAGGCGAGAACATTGCGGATAACGGAGGCATCAAAGAAGCTTACTACGCGTATCAAGCCTGGACTCACAGGCATGGTGAAGAAGCACGCCTGCCTGGATTGGAAAAATACAGTCCCCGACAGCTTTTCTGGCTTAGTGCTGCCAACACTTGGTGCGCAGTGTACCGCAATGAGGCAATCAAGTTGAGAATCACAACTGGATTCCATGCCCCCGGAAGATTCCGCGTCATTGGCCCCATGTCTAATATGGAAGAATTTGCCTCAGACTTCAAATGCCCTATGGGATCACCTATGAACCCTGACAAGAAATGCAAAGTGTGGTAG
Protein
MRYRQQFRKTLTKVDWMDDMTRQEALEKADAMASHIAYPSEMLDNNRLTEFYSGLEMSSEHLMESVLNLTLFTTEYLFGKLREPVNKTDWVTHGRPAIVNAFYSSIENSIQFPAGILQGAFFSAKRPAYMNYGAIGFVIGHEITHGFDDQGRQFDKNGNLVDWWQEMTKEKYLDKAKCIIDQYSNYTVKEVGLKLNGVNTQGENIADNGGIKEAYYAYQAWTHRHGEEARLPGLEKYSPRQLFWLSAANTWCAVYRNEAIKLRITTGFHAPGRFRVIGPMSNMEEFASDFKCPMGSPMNPDKKCKVW

Summary

EMBL
AB048208    BAB33300.1    BABH01007095    BABH01007096    AF413063    AAO21504.1    + More
NWSH01000486    PCG76063.1    MH298329    AWK67618.1    PCG76064.1    AGBW02010446    OWR48508.1    GDQN01007734    JAT83320.1    RSAL01000227    RVE43942.1    ODYU01006558    SOQ48505.1    GAIX01012266    JAA80294.1    KQ461108    KPJ09289.1    KQ459594    KPI96089.1    GDQN01000159    JAT90895.1    KQ434824    KZC07350.1    KQ414672    KOC64187.1    KQ762520    OAD55759.1    GBYB01014266    JAG84033.1    GBYB01007566    JAG77333.1    KQ435774    KOX75065.1    GL452067    EFN77995.1    KZ288217    PBC32410.1    KQ983014    KYQ48238.1    GGMS01016230    MBY85433.1    KQ980368    KYN16324.1    KQ981522    KYN40631.1    ABLF02019556    KU932343    APA33979.1    KQ976533    KYM81493.1    GFXV01003870    MBW15675.1    GECZ01027204    JAS42565.1    ADTU01026577    ADTU01026578    ADTU01026579    ADTU01026580    ADTU01026581    GL765283    EFZ16711.1    KQ978143    KYM96720.1    KK107496    EZA49818.1    GL888285    EGI63203.1    NEVH01000611    PNF43277.1    QOIP01000004    RLU24088.1    KQ971343    KYB27446.1    GL439090    EFN67881.1    KU245762    AND99761.1    GEDC01026857    JAS10441.1    DS231976    EDS30066.1    GEDC01013803    JAS23495.1    LBMM01001992    KMQ95435.1    DS235870    EEB19488.1    PNF43276.1    GFDL01001550    JAV33495.1    GEZM01094022    JAV56000.1    GFDL01001557    JAV33488.1    GFDL01001511    JAV33534.1    GEZM01094021    JAV56001.1    KK852675    KDR18716.1    UFQS01003165    UFQT01003165    SSX15299.1    SSX34674.1    GAPW01000331    JAC13267.1    ADMH02001926    ETN60478.1    JXUM01040714    JXUM01040715    JXUM01040716    JXUM01040717    JXUM01040718    JXUM01040719    JXUM01040720    NNAY01000760    OXU26642.1    KB632006    ERL87973.1    AXCM01000914    APGK01034174    APGK01034175    APGK01034176    APGK01034177    APGK01034178    KB740904    ENN78462.1    GGFL01004490    MBW68668.1    ATLV01017670    KE525181    KFB42373.1    AXCN02000208    GDHC01006833    JAQ11796.1    GBRD01015302    JAG50524.1    AAAB01008987    APCN01005946    CH477621    EAT38188.1    EAA01126.5    GFDF01001146    JAV12938.1    GDAI01002525    JAI15078.1    GFDF01001260    JAV12824.1    KK854278    PTY14137.1    GBXI01001946    GBXI01001592    JAD12346.1    JAD12700.1    GFDF01001261    JAV12823.1    ABLF02033036    ABLF02033037    JRES01000236    KNC33072.1   
Pfam
PF01431   Peptidase_M13        + More
PF05649   Peptidase_M13_N
PF08324   PUL
PF09070   PFU
PF00400   WD40
Interpro
IPR024079   MetalloPept_cat_dom_sf        + More
IPR008753   Peptidase_M13_N       
IPR042089   Peptidase_M13_dom_2       
IPR018497   Peptidase_M13_C       
IPR000718   Peptidase_M13       
IPR042116   TypA/BipA_C       
IPR011989   ARM-like       
IPR036322   WD40_repeat_dom_sf       
IPR038122   PFU_sf       
IPR013535   PUL_dom       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR015155   PFU       
IPR016024   ARM-type_fold       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
SUPFAM
SSF48371   SSF48371        + More
SSF50978   SSF50978       
PDB
5V48     E-value=1.06139e-78,     Score=745

Ontologies

Topology

Length:
307
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.74965
Exp number, first 60 AAs:
0.00137
Total prob of N-in:
0.32173
outside
1  -  307
 
 

Population Genetic Test Statistics

Pi
4.904208
Theta
12.462965
Tajima's D
-1.333845
CLR
0
CSRT
0.0821458927053647
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 VPWIEYINR 100.00 4e-05
29197581 VIDIDQASIGISR 100.00 4e-05
29197581 ANAIEMVNDIR 100.00 6e-04
26822097 GSDDVETCSAPGCIHTASR 100.00 0.031
29197581 CPMGSPMNPDKK 100.00 0.031
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