Gene

KWMTBOMO00328

Pre Gene Modal

BGIBMGA000696

Annotation

PREDICTED:_ras-specific_guanine_nucleotide-releasing_factor_RalGPS2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(+):9944465-9959680      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.618

CDS

ATGCCTCGAGACATATTGAGTGACAGCCTTGCTGTGTTGAGAATTGTGGAGCATGAAGATGAAGAGAATTGGCCTCTTGAGGACAAACCATGCAAGATTAATCACAAGAAGCAGTCCACTATCCCTCTCAATAGTCAACAAAGCTTCACTAAAGATGACTGTGCTTGCTATTACAATTATGGACATGGTGAAAATGGCAGCAACCGTCAACATGATTCCATTTTTCATTACAAAACAAACAGTCTACCAGCTGCTTGTTCAATTAATCAGTCTTGGGATGATATAGTTTGTTCAGCCCTGAGGCTGAGTCCTGATGATGTTGGAAATCAACTGACATTACTTGACTTACCCTGTTTTAAAGCTATCAAGCCTGAAGAATTGACAACATGTGGCTGGACCAAACTGAACAAATTGACTGTGGCACCTAATGTGGTGGCATTTACGAAGAGATTCAATAGGGTCAGCTTTTGGACCGTACAAGAGATATTAAATGGTCAATCACCAAAAGCGAGGGCGGAAATAATGGCGCATTTTATTAAAGTCGCAAAAAAATTACACGAATTGAACAATTTGCATTCTCTGTTCGCTGTGATCTCTGCTTTGCATAGTGCCAGCATATACAGGTTGACAAAAACATGGGCCTGCTTATCGAAAAAGGATAAGCAGCAGTTTGATAAACTTGCAGAGTTATTTGGGGAAACCGATAACTGGACTGCTCTGAGGGAATATTTGAAGTCTATATCCTTGCCTTGTATTCCTTATCTAGGTATATTCTTAACCGACTTAGTGTACATCGACATCGCTCATCCAGCTGGATCTCCGCATCGCGTAACAAAAATGAACATAGTACTTAAAGCATTAGAACGTTACCAGTCTTCTGAATATGAGATCGCGCCATTACCGCACGTGGCAAACTTTTTGAACAGCGTCCGTTATATTGAAGAACTCCAGAAGTTTGTGGAGGACGATCAATACAAATTATCATTAAAATTAGAGCCCCCGTCACCGGTTGGTAGTTGTGCTGGTTCTAAAGAATCCGTCAAGGAAACAGTACTTCAGGGTAACGTGACAACATTCAACATATCACCATCACACAAACTGGGTTCTGGCTCTCTAAGGTTGCAGGGAACATCTCATCAAGGAAAATTCATACCAACTCACAGGAAATGTCGTTCATTGGGCTCTAATATATTCGGAAAGAGTCACACTGAAGATAAAATGGACGAGAAAACGCCGGCCGGCTCAGTGAATTTGCTCGATGATACGTTGCTAGAGTCGCCGTCTTCGGTCGCTTGTGCCAAGATGTCGCAATCCTTGCCACACAGTAATATTACGAAACCAGAAGACATTCAGTGCGACTTTCAAGGGTGCGTGAAAAGGAAAACAATATTGAAAGAAGGAAGAAAAATATCACTGTCTTCGTGGCAACGTTACTGGCTTCAAATGTCGGGGAACATGCTGTTTTTTTATGGAGCGAAATCTTTTAAAGGGACGAATCGAAGCGACTTCCGCAGCGAGAGATGTAAGGTTTTGACTCTGGTCGGTTGGATAGCAGTCTGGGCTGACGGTGACGCGGCCGATGCATTCCAGCTTATAAACCATCATAGCGGAACAGTGTACAAATTTAAGGCCGGATCTGAATATGCAGCTAAGCAGTGGATAGCGAAGATCGAAGAAGTAACAAACAAAATAGTGAAACCTCTCCCGGCGAATCTCATGTCATTCGAATAA

Protein

MPRDILSDSLAVLRIVEHEDEENWPLEDKPCKINHKKQSTIPLNSQQSFTKDDCACYYNYGHGENGSNRQHDSIFHYKTNSLPAACSINQSWDDIVCSALRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTVQEILNGQSPKARAEIMAHFIKVAKKLHELNNLHSLFAVISALHSASIYRLTKTWACLSKKDKQQFDKLAELFGETDNWTALREYLKSISLPCIPYLGIFLTDLVYIDIAHPAGSPHRVTKMNIVLKALERYQSSEYEIAPLPHVANFLNSVRYIEELQKFVEDDQYKLSLKLEPPSPVGSCAGSKESVKETVLQGNVTTFNISPSHKLGSGSLRLQGTSHQGKFIPTHRKCRSLGSNIFGKSHTEDKMDEKTPAGSVNLLDDTLLESPSSVACAKMSQSLPHSNITKPEDIQCDFQGCVKRKTILKEGRKISLSSWQRYWLQMSGNMLFFYGAKSFKGTNRSDFRSERCKVLTLVGWIAVWADGDAADAFQLINHHSGTVYKFKAGSEYAAKQWIAKIEEVTNKIVKPLPANLMSFE

Uniprot

H9ITW6   A0A212FHJ2   A0A194QWG5   A0A194PTJ1   A0A2A4JME9   D6WFX1   + More
A0A1Y1JWT9   N6UGG5   J3JUC6   U4U166   A0A139WKN5   A0A067RQP1   A0A2J7PWW4   A0A0C9RX03   A0A1B6D0P2   A0A1B6ILL5   A0A1B6DXE0   A0A1B6EJD4   A0A0Q9WCY4   A0A0M4EUR1   N6WC08   A0A1Q3G2F7   E0VXI0   A0A3B0JPQ6   A0A0N8P0D5   A0A3B0JGX0   W8B793   A0A1W4UKQ9   A0A0R1DUJ7   A0A0J9REL3   A0A0Q5VZG6   T1JKV5   A0A0Q9XIM7   A0A0K8U0H0   Q8MT78   A0A0A1XDY0   A0A2J7PWV4   A0A1L8DMI2   Q16MY3   A0A1S4FVS5   B4MPZ9   B4LN69   T1PDY5   A0A034V922   A0A0K8TNA4   A0A1I8M898   Q28YW0   A0A1A9WQS3   A0A1W7R9U2   B4GIL4   B3MDA9   A0A1A9ZXA3   B4P5V6   A0A1A9UQ19   A0A1W4UZS1   B4J4C0   K7IVA5   A0A0J9U3W8   B4QIF9   A0A232FKZ4   B3NP68   A0A1B0G760   A0A0K8VEE8   A0A1B0B696   A0A1A9YJ07   Q0E949   B4KTZ2   A0A0P4WK96   A0A087UBM3   V4ALC1   A0A2C9KU07   A0A2C9KU01   A0A2C9KU70   A0A2C9KU17   A0A2C9KUA6   K1PWZ8   A0A2M4APJ3   Q7Q955   B0WPM9   A0A2C9GRG9   A0A182LHX2   A0A336MFM3   A0A336N063   A0A084VUD1   A0A182NNM4   A0A210PZI8   A0A2I3H8Q2   A0A182TW43   A0A0L8HI93   A0A1S3F3B4   A0A3B3QW53   W5JLH1   A0A182F9Q1   A0A3P8QI46   A0A0L8HIA6   A0A2K5XTP2   A0A2K5L1R0   A0A2K6B9Z7  

Pubmed

19121390    22118469    26354079    18362917    19820115    28004739    + More
23537049    22516182    24845553    17994087    15632085    20566863    24495485    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    17510324    25348373    26369729    25315136    20075255    28648823    23254933    15562597    22992520    12364791    14747013    17210077    20966253    24438588    28812685    29240929    20920257    23761445   

EMBL

BABH01007084    AGBW02008503    OWR53177.1    KQ461108    KPJ09305.1    KQ459594    + More
KPI96074.1    NWSH01001054    PCG72898.1    KQ971328    EEZ99782.2    GEZM01098999    JAV53583.1    APGK01026956    APGK01026957    APGK01026958    KB740648    ENN79736.1    BT126839    AEE61801.1    KB631780    ERL86038.1    KYB28381.1    KK852480    KDR22955.1    NEVH01020867    PNF20814.1    GBYB01013610    JAG83377.1    GEDC01025014    GEDC01018050    GEDC01000001    JAS12284.1    JAS19248.1    JAS37297.1    GECU01019902    JAS87804.1    GEDC01015502    GEDC01006971    JAS21796.1    JAS30327.1    GECZ01031745    JAS38024.1    CH940648    KRF79220.1    CP012524    ALC41220.1    CM000071    ENO01709.1    GFDL01001084    JAV33961.1    DS235832    EEB18086.1    OUUW01000001    SPP74621.1    CH902619    KPU76820.1    SPP74620.1    GAMC01020851    JAB85704.1    CM000158    KRK00158.1    CM002911    KMY94366.1    CH954179    KQS62410.1    JH431671    CH933808    KRG04177.1    GDHF01032283    JAI20031.1    AE013599    AY118334    AAF57951.1    AAM48363.1    GBXI01016880    GBXI01015041    GBXI01005120    JAC97411.1    JAC99250.1    JAD09172.1    PNF20815.1    GFDF01006416    JAV07668.1    CH477845    EAT35707.1    CH963849    EDW74188.1    EDW60073.1    KA646956    AFP61585.1    GAKP01020340    JAC38612.1    GDAI01001995    JAI15608.1    EAL25855.1    GFAH01000477    JAV47912.1    CH479183    EDW36334.1    EDV37442.1    EDW91872.1    CH916367    EDW01602.1    AAZX01008374    KMY94365.1    CM000362    EDX07406.1    NNAY01000096    OXU31017.1    EDV55707.1    CCAG010003787    CCAG010003788    GDHF01014990    JAI37324.1    JXJN01009035    AAF57952.1    AAM70887.1    AAM70888.1    EDW08569.1    GDRN01048592    JAI66642.1    KK119109    KFM74762.1    KB199651    ESP04999.1    JH817429    EKC20915.1    GGFK01009356    MBW42677.1    AAAB01008905    EAA09697.4    DS232027    EDS32432.1    APCN01005346    UFQS01001121    UFQT01001121    SSX09104.1    SSX29015.1    UFQT01001734    SSX31568.1    ATLV01016720    KE525103    KFB41575.1    NEDP02005343    OWF41911.1    ADFV01184932    ADFV01184933    ADFV01184934    ADFV01184935    ADFV01184936    ADFV01184937    ADFV01184938    KQ418071    KOF88962.1    ADMH02001216    ETN63624.1    KOF88961.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000218220    UP000007266    + More
UP000019118    UP000030742    UP000027135    UP000235965    UP000008792    UP000092553    UP000001819    UP000009046    UP000268350    UP000007801    UP000192221    UP000002282    UP000008711    UP000009192    UP000000803    UP000008820    UP000007798    UP000095301    UP000091820    UP000008744    UP000092445    UP000078200    UP000001070    UP000002358    UP000000304    UP000215335    UP000092444    UP000092460    UP000092443    UP000054359    UP000030746    UP000076420    UP000005408    UP000007062    UP000002320    UP000075840    UP000075882    UP000030765    UP000075884    UP000242188    UP000001073    UP000075902    UP000053454    UP000081671    UP000261540    UP000000673    UP000069272    UP000265100    UP000233140    UP000233060    UP000233120   

PRIDE

H9ITW6    Q8MT78    Q0E949   

Pfam

PF00617   RasGEF        + More
PF00169   PH
PF00596   Aldolase_II

Interpro

IPR011993   PH-like_dom_sf        + More
IPR030708   RalGPS1/2       
IPR001849   PH_domain       
IPR036964   RASGEF_cat_dom_sf       
IPR008937   Ras-like_GEF       
IPR023578   Ras_GEF_dom_sf       
IPR001895   RASGEF_cat_dom       
IPR036409   Aldolase_II/adducin_N_sf       
IPR001303   Aldolase_II/adducin_N       

SUPFAM

SSF48366   SSF48366        + More
SSF53639   SSF53639       

Gene 3D

1.10.840.10     2.30.29.30     3.40.225.10    

CDD

cd00155  RasGEF

ProteinModelPortal

H9ITW6   A0A212FHJ2   A0A194QWG5   A0A194PTJ1   A0A2A4JME9   D6WFX1   + More
A0A1Y1JWT9   N6UGG5   J3JUC6   U4U166   A0A139WKN5   A0A067RQP1   A0A2J7PWW4   A0A0C9RX03   A0A1B6D0P2   A0A1B6ILL5   A0A1B6DXE0   A0A1B6EJD4   A0A0Q9WCY4   A0A0M4EUR1   N6WC08   A0A1Q3G2F7   E0VXI0   A0A3B0JPQ6   A0A0N8P0D5   A0A3B0JGX0   W8B793   A0A1W4UKQ9   A0A0R1DUJ7   A0A0J9REL3   A0A0Q5VZG6   T1JKV5   A0A0Q9XIM7   A0A0K8U0H0   Q8MT78   A0A0A1XDY0   A0A2J7PWV4   A0A1L8DMI2   Q16MY3   A0A1S4FVS5   B4MPZ9   B4LN69   T1PDY5   A0A034V922   A0A0K8TNA4   A0A1I8M898   Q28YW0   A0A1A9WQS3   A0A1W7R9U2   B4GIL4   B3MDA9   A0A1A9ZXA3   B4P5V6   A0A1A9UQ19   A0A1W4UZS1   B4J4C0   K7IVA5   A0A0J9U3W8   B4QIF9   A0A232FKZ4   B3NP68   A0A1B0G760   A0A0K8VEE8   A0A1B0B696   A0A1A9YJ07   Q0E949   B4KTZ2   A0A0P4WK96   A0A087UBM3   V4ALC1   A0A2C9KU07   A0A2C9KU01   A0A2C9KU70   A0A2C9KU17   A0A2C9KUA6   K1PWZ8   A0A2M4APJ3   Q7Q955   B0WPM9   A0A2C9GRG9   A0A182LHX2   A0A336MFM3   A0A336N063   A0A084VUD1   A0A182NNM4   A0A210PZI8   A0A2I3H8Q2   A0A182TW43   A0A0L8HI93   A0A1S3F3B4   A0A3B3QW53   W5JLH1   A0A182F9Q1   A0A3P8QI46   A0A0L8HIA6   A0A2K5XTP2   A0A2K5L1R0   A0A2K6B9Z7  

PDB

3QXL     E-value=9.43194e-78,     Score=740

KEGG

101741539    no KO assigned | (RefSeq) ras-specific guanine nucleotide-releasing factor RalGPS1

GO

GO:0007264   GO:0005085   GO:0008321   GO:0032485   GO:0003777   GO:0007018   GO:0030286   GO:0006813   GO:0006810   GO:0009072   GO:0007169   GO:0016021  

PANTHER

PTHR23113:SF180   PTHR23113  

Length:

576

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1949

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00342

outside

1  -  576

 

 

Pi

21.762213

Theta

23.362515

Tajima's D

0.052327

CLR

0.066618

CSRT

0.381730913454327

Interpretation

Uncertain