Gene

KWMTBOMO00322

Annotation

PREDICTED:_dynein_heavy_chain_6?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr1(+):9830225-9832606      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.788 Nuclear   Reliability : 2.154

CDS

ATGTTAAAACCTCGAGAAATACCATTTCATTTACCTCACAAAAAATTACTTGAAAAAATTGAACATGTACAAAAGGAACCTGAACCATTGACAGGATTCAAAGCTGCACAAGATGACAGATACCGCAGAGAAAGAAAACCAGTAAAATTGGAGCCACTCAAATTGGAGGATGGGACATCCAATGTTAAAGAAAAAAAGAAACGTGCTCTAAAAATCCGCGAGTCACGAGACAGCGTGGAAATAAGTAAGGAGTGCACAACCGATCCTTTGAAGGTGAAACCTGTCGTGGCGTCACAGAAGGAAGTGATCGATTACGTGAGAGCGAACCCGTCCTGTGGCTTCCTTTATATGATATACGCCGTGCACCCGGAGAACGTTTATTTTACGCCCTACTATCTAAAAGTGGTAACTTACGAAGAAATCGATAAGAAGAATTATCTAACTATTAGTCCCTGCGGCGTAACGCATTATACCAACGAAATGGTCTTCACAAAATTGCCGGCTTGGGAACAGGAATACACCATTTTCGTAAAACTAACTGATGTAAGTACCAAGTATGAAGCTAAGAAACATAATAAAAGATAA

Protein

MLKPREIPFHLPHKKLLEKIEHVQKEPEPLTGFKAAQDDRYRRERKPVKLEPLKLEDGTSNVKEKKKRALKIRESRDSVEISKECTTDPLKVKPVVASQKEVIDYVRANPSCGFLYMIYAVHPENVYFTPYYLKVVTYEEIDKKNYLTISPCGVTHYTNEMVFTKLPAWEQEYTIFVKLTDVSTKYEAKKHNKR

Uniprot

A0A212FHF6   A0A194R0D5   A0A2A4JLN6   A0A2H1WWC6   A0A1W4XE21   U4U3A6   + More
N6UMD3   A0A088ATW2   A0A2A3EHL8   A0A1Y1M8J9   A0A1Y1MEY6   D6WDA6   A0A1B6G8A1   A0A1B6CU24   S7Q365   A0A1A6HU20   H9G474   A0A369SJK2   A0A2G8KR50  

Pubmed

22118469    26354079    23537049    28004739    18362917    19820115    + More
21881562    30042472    29023486   

EMBL

AGBW02008503    OWR53172.1    KQ461108    KPJ09301.1    NWSH01001054    PCG72891.1    + More
ODYU01011155    SOQ56724.1    KB631968    ERL87542.1    APGK01026614    KB740635    ENN79877.1    KZ288255    PBC30686.1    GEZM01037858    JAV81881.1    GEZM01037862    GEZM01037861    GEZM01037860    GEZM01037859    GEZM01037857    GEZM01037855    JAV81877.1    KQ971321    EEZ99537.1    GECZ01011130    JAS58639.1    GEDC01020316    JAS16982.1    KE164400    EPQ17758.1    LZPO01017286    OBS81232.1    AAWZ02025439    AAWZ02025440    AAWZ02025441    AAWZ02025442    AAWZ02025443    AAWZ02025444    NOWV01000004    RDD47085.1    MRZV01000419    PIK50445.1   

Proteomes

UP000007151    UP000053240    UP000218220    UP000192223    UP000030742    UP000019118    + More
UP000005203    UP000242457    UP000007266    UP000092124    UP000001646    UP000253843    UP000230750   

Pfam

PF12774   AAA_6        + More
PF08393   DHC_N2
PF12781   AAA_9
PF03028   Dynein_heavy
PF18198   AAA_lid_11
PF12780   AAA_8
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF17857   AAA_lid_1
PF12777   MT

Interpro

IPR041589   DNAH3_AAA_lid_1        + More
IPR035706   AAA_9       
IPR042222   Dynein_2_N       
IPR027417   P-loop_NTPase       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR042219   AAA_lid_11_sf       
IPR026983   DHC_fam       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR003593   AAA+_ATPase       
IPR041466   Dynein_AAA5_ext       
IPR041658   AAA_lid_11       
IPR041228   Dynein_C       
IPR035699   AAA_6       
IPR025662   Sigma_54_int_dom_ATP-bd_1       
IPR042228   Dynein_2_C       
IPR027267   AH/BAR_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF103657   SSF103657       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20    

ProteinModelPortal

A0A212FHF6   A0A194R0D5   A0A2A4JLN6   A0A2H1WWC6   A0A1W4XE21   U4U3A6   + More
N6UMD3   A0A088ATW2   A0A2A3EHL8   A0A1Y1M8J9   A0A1Y1MEY6   D6WDA6   A0A1B6G8A1   A0A1B6CU24   S7Q365   A0A1A6HU20   H9G474   A0A369SJK2   A0A2G8KR50  

KEGG

105842154    no KO assigned | (RefSeq) dynein heavy chain 6, axonemal-like

GO

GO:0031514   GO:0005524   GO:0003777   GO:0005858   GO:0060285   GO:0016887   GO:0007018   GO:0045505   GO:0008569   GO:0030286   GO:0051959   GO:0045503  

PANTHER

PTHR10676  

Length:

194

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12244

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06763

outside

1  -  194

 

 

Pi

1.960141

Theta

5.678252

Tajima's D

-2.049472

CLR

0

CSRT

0.00869956502174891

Interpretation

Uncertain