Gene

KWMTBOMO00321

Pre Gene Modal

BGIBMGA000535

Annotation

PREDICTED:_ras-GEF_domain-containing_family_member_1B-like_[Bombyx_mori]

Location

Bomo_Chr1(-):9824026-9828644      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.818

CDS

ATGGTGAGAGGTAATAAGTTTATGTCTGAAAACTCATGTAAGCACATAGTAATGAATGGTGGCATTAATTTTGTAGCTACTCAAAAAGTTGAAGGTCCACAGTTGTCTACAGTTCTTACTCCTGGTGTAAAGGCTATTCCAAATCATCCCTACACAAATTGCACTACTGAAAAATCAGACATAGAATATAGAGATGGTCAAATTGTGAGCGCCACATTAGATACACTGGTGGAAATGCTTCGTCCTGGGGCAAGCAAATCTTTCACGTTTACATTTTTACTATGTTCTCGACTCTACCTAAAACCTCATGAATTACTCAGCAAACTTTGTAAACTATATTTCAGAAACTATGACAAAGTAGGAAAGGCAGAAGTCAAAGATTTAGTCGAAAAAGAATTGAATGACATGATAGCTCTTGTGAGAGTGCTCCGTCAGTGGACAAGCATGTTTCCTTATGATTTTCGTGATGATAGAGTAATGGCCCTGGTTCGTAGTATTACACAAAGATGTGCAGCAGAACATATGGAATCAGTTCGAGTTGAAATGTCAACAACTTTAGAGAAATTACTCGACAAACTAACAGCTTTAGAACAGTATGAAGAGTCACTAGTGGATATAACTCAAGTGTCTTCACTGGATCAGCTGTCTCAGGGCGACATCCTGACACTCGGTCTAACCCCTGTCGAGCTGGCCAATCAACTTACCATAGTGGAGTTGCACAGACTATCGTTTGTCGGTCCCGAAGAATTCGTTCAGACATTTGCTCCAATCCATCCACCGCAGTCCACGTCTGCCTGTAAAACTTCTATAAGCCTACATCATATCGATACTAAGTGCACGAGAAATCTAGAAGCGTACGCCGATTGGTTCAACAGGCTGAGTTATTTAGTTGCAACGGATATATTGAAGGGAGTGAAGAGTAAATACAGAGCTCGGGTGATTGAACAGTGGGTGATGACTGGAAGAGAATGTTTTAATCTTGGCAACTTTAATTCTCTCATGGCCATAATCAGTGCACTGAACATGTCTCCGGTCATGAGATTGAAAAAAACCGTAAGTGTATAA

Protein

MVRGNKFMSENSCKHIVMNGGINFVATQKVEGPQLSTVLTPGVKAIPNHPYTNCTTEKSDIEYRDGQIVSATLDTLVEMLRPGASKSFTFTFLLCSRLYLKPHELLSKLCKLYFRNYDKVGKAEVKDLVEKELNDMIALVRVLRQWTSMFPYDFRDDRVMALVRSITQRCAAEHMESVRVEMSTTLEKLLDKLTALEQYEESLVDITQVSSLDQLSQGDILTLGLTPVELANQLTIVELHRLSFVGPEEFVQTFAPIHPPQSTSACKTSISLHHIDTKCTRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIISALNMSPVMRLKKTVSV

Uniprot

A0A2H1WUJ3   A0A2A4JNA8   A0A212FHF1   A0A0L7LP12   H9ITF5   A0A194QWG0   + More
A0A0L7QLK1   E2A6H2   F4X7R2   A0A1B6KSI8   E9J8M3   A0A195DJI7   A0A1B6GQD3   A0A026WCI0   A0A0J7NNZ2   A0A1B6LJX3   A0A1B6FHT8   A0A0C9PVN3   A0A232FNN0   A0A1B6KL78   A0A0C9Q114   A0A2A3ERH9   A0A1B6L238   A0A310SIS1   A0A1B6M9X1   A0A088AFZ9   A0A1B6LRM7   E0W133   A0A3Q0IY90   A0A2S2R1X5   A0A0P5C6D0   A0A0P5JUU4   A0A3L8DPM1   A0A2S2NZ78   A0A0P4ZRV8   A0A0P5BN53   A0A0P4Y4B7   A0A0P5FY82   A0A0P5SKQ2   A0A2K6FMV9   T1JM98   A0A0P5ELH0   A0A1W4XGH8   A0A0P5C6K2   A0A1B6E6V3   E9G6Y1   A0A0P5NEQ1   J9JNC8   A0A0N8DQM8   D6WGH0   A0A226F688   A0A1W4X711   A0A2K6FMW0   A0A0N8BDH7   A0A0N8EKM3   N6UA83   A0A2H8TYT0   A0A2Y9S4V5   A0A1B6CMM8   G3UN08   A0A091NF75   A0A0N8A7I3   T1IBR6   A0A2S2NZ67   A0A1S3FHB1   A0A0P4VFF6   A0A218V346   U3JTD2   A0A3L8SFE5   G3SWJ9   I3MNR0   G5AMF0   A0A2J8UUK2   A0A091L6D6   A0A2Y9F968   A0A383YSF1   A0A2U3V942   A0A341D7W1   A0A2K5LRV5   A0A091F423   A0A091SG88   G1SZB4   A0A1U7U8E2   A0A383YSB1   A0A0T6AU52   A0A383YS36   A0A093J9H9   A0A1D2MBK5   A0A383YS31   A0A2U4B579   A0A1S3FGR7   A0A287D243   S7NX05   R0K948   A0A2Y9Q880   A0A2I3HEP0   G3QGF1   A0A2R9AQC1   A0A2I3SZI8  

Pubmed

22118469    26227816    19121390    26354079    20798317    21719571    + More
21282665    24508170    28648823    20566863    30249741    21292972    18362917    19820115    23537049    27129103    30282656    21993625    21993624    27289101    22398555    22722832    16136131   

EMBL

ODYU01011155    SOQ56723.1    NWSH01001054    PCG72890.1    AGBW02008503    OWR53171.1    + More
JTDY01000420    KOB77278.1    BABH01007074    BABH01007075    KQ461108    KPJ09300.1    KQ414914    KOC59508.1    GL437125    EFN70972.1    GL888884    EGI57511.1    GEBQ01025565    JAT14412.1    GL769036    EFZ10821.1    KQ980824    KYN12649.1    GECZ01005134    JAS64635.1    KK107293    EZA53386.1    LBMM01002890    KMQ94220.1    GEBQ01016030    JAT23947.1    GECZ01020256    JAS49513.1    GBYB01005518    GBYB01009009    JAG75285.1    JAG78776.1    NNAY01000009    OXU32068.1    GEBQ01027755    JAT12222.1    GBYB01007603    JAG77370.1    KZ288197    PBC33729.1    GEBQ01022219    JAT17758.1    KQ759822    OAD62678.1    GEBQ01007245    JAT32732.1    GEBQ01013597    JAT26380.1    DS235866    EEB19339.1    GGMS01014783    MBY83986.1    GDIP01174872    GDIQ01097687    JAJ48530.1    JAL54039.1    GDIQ01199348    JAK52377.1    QOIP01000005    RLU22311.1    GGMR01009922    MBY22541.1    GDIP01213279    JAJ10123.1    GDIP01187286    GDIQ01248375    GDIQ01099590    LRGB01000781    JAJ36116.1    JAK03350.1    KZS15977.1    GDIP01232888    JAI90513.1    GDIQ01250020    JAK01705.1    GDIP01142121    JAL61593.1    JH431938    GDIP01158030    JAJ65372.1    GDIP01174874    JAJ48528.1    GEDC01003630    JAS33668.1    GL732534    EFX84733.1    GDIQ01165858    JAK85867.1    ABLF02026418    ABLF02026420    ABLF02026424    ABLF02041639    GDIP01010423    JAM93292.1    KQ971321    EFA01326.1    LNIX01000001    OXA65017.1    GDIQ01188443    JAK63282.1    GDIQ01017484    JAN77253.1    APGK01042958    APGK01042959    KB741011    KB632341    ENN75532.1    ERL92991.1    GFXV01007660    MBW19465.1    GEDC01022571    JAS14727.1    KK831241    KFP76692.1    GDIP01174873    GDIQ01099589    JAJ48529.1    JAL52137.1    ACPB03018803    ACPB03018804    ACPB03018805    GGMR01009846    MBY22465.1    GDKW01003949    JAI52646.1    MUZQ01000061    OWK60369.1    AGTO01000357    QUSF01000025    RLW00871.1    AGTP01102778    AGTP01102779    AGTP01102780    AGTP01102781    AGTP01102782    AGTP01102783    AGTP01102784    AGTP01102785    AGTP01102786    AGTP01102787    JH165995    EHA98210.1    NDHI03003443    PNJ48937.1    KK740388    KFP38526.1    KK719673    KFO64913.1    KK471312    KFQ57619.1    AAGW02022797    AAGW02022798    AAGW02022799    LJIG01022801    KRT78642.1    KK603542    KFW07644.1    LJIJ01002048    ODM90302.1    KE161194    EPQ02183.1    KB742619    EOB06332.1    ADFV01030243    ADFV01030244    ADFV01030245    ADFV01030246    ADFV01030247    ADFV01030248    ADFV01030249    ADFV01030250    ADFV01030251    ADFV01030252    CABD030031648    CABD030031649    CABD030031650    CABD030031651    CABD030031652    CABD030031653    CABD030031654    CABD030031655    CABD030031656    CABD030031657    AJFE02115023    AJFE02115024    AJFE02115025    AJFE02115026    AJFE02115027    AJFE02115028    AJFE02115029    AJFE02115030    AJFE02115031    AJFE02115032    AACZ04033832    NBAG03000215    PNI82976.1   

Proteomes

UP000218220    UP000007151    UP000037510    UP000005204    UP000053240    UP000053825    + More
UP000000311    UP000007755    UP000078492    UP000053097    UP000036403    UP000215335    UP000242457    UP000005203    UP000009046    UP000079169    UP000279307    UP000076858    UP000233160    UP000192223    UP000000305    UP000007819    UP000007266    UP000198287    UP000019118    UP000030742    UP000007646    UP000015103    UP000081671    UP000197619    UP000016665    UP000276834    UP000005215    UP000006813    UP000248484    UP000261681    UP000245320    UP000252040    UP000233060    UP000052976    UP000001811    UP000189704    UP000094527    UP000248483    UP000001073    UP000001519    UP000240080    UP000002277   

PRIDE

H9ITF5   

Pfam

PF00617   RasGEF        + More
PF00618   RasGEF_N

Interpro

IPR001895   RASGEF_cat_dom        + More
IPR023578   Ras_GEF_dom_sf       
IPR008937   Ras-like_GEF       
IPR036964   RASGEF_cat_dom_sf       
IPR000651   Ras-like_Gua-exchang_fac_N       
IPR019804   Ras_G-nucl-exch_fac_CS       

SUPFAM

SSF48366   SSF48366       

Gene 3D

1.10.840.10    

CDD

cd06224  REM
cd00155  RasGEF

ProteinModelPortal

A0A2H1WUJ3   A0A2A4JNA8   A0A212FHF1   A0A0L7LP12   H9ITF5   A0A194QWG0   + More
A0A0L7QLK1   E2A6H2   F4X7R2   A0A1B6KSI8   E9J8M3   A0A195DJI7   A0A1B6GQD3   A0A026WCI0   A0A0J7NNZ2   A0A1B6LJX3   A0A1B6FHT8   A0A0C9PVN3   A0A232FNN0   A0A1B6KL78   A0A0C9Q114   A0A2A3ERH9   A0A1B6L238   A0A310SIS1   A0A1B6M9X1   A0A088AFZ9   A0A1B6LRM7   E0W133   A0A3Q0IY90   A0A2S2R1X5   A0A0P5C6D0   A0A0P5JUU4   A0A3L8DPM1   A0A2S2NZ78   A0A0P4ZRV8   A0A0P5BN53   A0A0P4Y4B7   A0A0P5FY82   A0A0P5SKQ2   A0A2K6FMV9   T1JM98   A0A0P5ELH0   A0A1W4XGH8   A0A0P5C6K2   A0A1B6E6V3   E9G6Y1   A0A0P5NEQ1   J9JNC8   A0A0N8DQM8   D6WGH0   A0A226F688   A0A1W4X711   A0A2K6FMW0   A0A0N8BDH7   A0A0N8EKM3   N6UA83   A0A2H8TYT0   A0A2Y9S4V5   A0A1B6CMM8   G3UN08   A0A091NF75   A0A0N8A7I3   T1IBR6   A0A2S2NZ67   A0A1S3FHB1   A0A0P4VFF6   A0A218V346   U3JTD2   A0A3L8SFE5   G3SWJ9   I3MNR0   G5AMF0   A0A2J8UUK2   A0A091L6D6   A0A2Y9F968   A0A383YSF1   A0A2U3V942   A0A341D7W1   A0A2K5LRV5   A0A091F423   A0A091SG88   G1SZB4   A0A1U7U8E2   A0A383YSB1   A0A0T6AU52   A0A383YS36   A0A093J9H9   A0A1D2MBK5   A0A383YS31   A0A2U4B579   A0A1S3FGR7   A0A287D243   S7NX05   R0K948   A0A2Y9Q880   A0A2I3HEP0   G3QGF1   A0A2R9AQC1   A0A2I3SZI8  

PDB

3QXL     E-value=1.39179e-09,     Score=150

KEGG

101741018    no KO assigned | (RefSeq) ras-GEF domain-containing family member 1B-like

GO

GO:0005085   GO:0043547   GO:0007264   GO:0005088   GO:0016020   GO:0016021   GO:0005737   GO:0006813   GO:0006810   GO:0009072   GO:0007169  

PANTHER

PTHR23113  

Length:

354

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.88222

Exp number, first 60 AAs:

0.00155

Total prob of N-in:

0.04711

outside

1  -  354

 

 

Pi

19.131871

Theta

22.810683

Tajima's D

-0.814796

CLR

0.159341

CSRT

0.175141242937853

Interpretation

Uncertain