Gene

KWMTBOMO00318

Pre Gene Modal

BGIBMGA000690

Annotation

PREDICTED:_uncharacterized_protein_LOC101740877_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(+):9798715-9801089      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.823

CDS

ATGAGCTCGCCTAAGCTAAATGAAAGATGTTCCAGTGTCTTGGGGAATGGTAAAAAACTTCTAGCAAATGATTCTAAAGAAGATTCATTGGACAATTCGATAAGAGAATCATTTAAATCTGAAAGATCAGGGGGTGCTAAAAATGAAGAAGATTGGAGAAGACGTACCATTATTGTAGAAAAGAAAAACGGCAGCTACGGATTTACCCTTCAAAGTTATGGTATCCATTATAAGAAGGAACAAGAAATTGAAGTAATAACGTATGTTGATCATGTGGAAATGGAAGGACCCGCTGCCTTAGCAGGAATGCGCGAAGGCGACGTCATCTTGTCCATTAACGGAATGGACGTGGAAAGAGCTGAACACGCTGCTATTGTCGATGCTATAAATTCTTGTGATTCGAGAATGAGAATGGTAGTTATTTTTGAAGATTGTGTCCGGAAAGTCGAATTGCACCTCAAATACATAAACCTGCAAAGAACTCTTCAATCGAAAATGCGAGAATTAGAACAGTTATCGATTCGCGAAAGACAACTGTTTGATGCTAACTGGAAGACTCACAGTTTACCATCGCAAAAGAAGAAATCGTCCCCTAATGATGTCATATCAGACGTTGAAGATAGCAACGAATCTCAAAATATGGGCACTACATACAGACCTACGTTGTCTAGTGAGAATGTGACTGCTGCTAAACCACCACACCCGAATGTTTTTATGTATCAGTATCTAGACCCACATTATGGAACTTGCTTAATTCAGCCTAATCTGCACACTGGCAGTTTTGTTATTACTGTTGGCTCTCCGAGAAATAGCCGAGATTGTCATCATTATATTGTGAAAGCACCTAATGATTGTTATCGAGCATCGGAAATATATAAGTCTACAAATTCAAAACACTCTAAAATGCATAGAAGCAATCATAGTCATAGCTGTGCTCCGTGCATGCCAGTATATAACAATCCGGACGCAAATAGTCTGGAGGCATATGATCTAGCCAGTCCGTGTTGTGACCCGCACTGTGTCCCTCATACCAGGAAAAAAGTCAGAAGAAAAAAGGAATGTTCAAAAGACCACAAAAGAAGGGAAAAATATCAAGTTGATAAATCTACCCAAAAACCTGATAATGTCCCTCCGCCACGAATGAAAAAAGTATGTTCTTCTGGCCATTGTTCCCGTTATCGTTACTTGACCACCGAATCTACGCAAACTAGTCAATGCAGCCTGCAGTCGTATGCTACAAGCAACGCTACTGTACCGTGTGACAACTCCGCTTCTAGTTACACCACGTCACTTAGCAGCGATACTTTATTTTGGGATAACGATCGATCTGAAACAAAATCTTCTCCTAAGATTCAATATCAAAGCTCACACCAACACGTGAAGCCTAAGTCCTGGGATAATCTCACAACCAAAGCATTTGGTGGTTATGGATTTGGATATGGTTATTTGGATACAACCGCGAAACAATCAAATAGATCAAAAAGTCACGGCCGTAGCCACAGTGGTAGAAGCACACAAAGCCATCATGAATATCAGCAACACCACGAGAAGCATGTTCACCGTCAAAGTGCGAACACTCAACACTATTCAGTGTACACACGTAGCCACAGCCATTACCAACCGACTAAATCTACAGAAAGCCTTATCGTGGTCCCTAAATATCAGTTGGAGAGTAGCGGCTCAGAGAGTCGACTTGCATGTGAATGTACTGATTCCATTGAATACTATCGCAGGATCACTACCAGCAAGAATCCGGGAGAGCCTCAATCTGCAAATTATTATACTCCACATTTCGTATATCCGTCGCATTCTTACAAAAAGAGAGATTCCAACGTCAGCTCCGAAATAACACGGTTATAA

Protein

MSSPKLNERCSSVLGNGKKLLANDSKEDSLDNSIRESFKSERSGGAKNEEDWRRRTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVIFEDCVRKVELHLKYINLQRTLQSKMRELEQLSIRERQLFDANWKTHSLPSQKKKSSPNDVISDVEDSNESQNMGTTYRPTLSSENVTAAKPPHPNVFMYQYLDPHYGTCLIQPNLHTGSFVITVGSPRNSRDCHHYIVKAPNDCYRASEIYKSTNSKHSKMHRSNHSHSCAPCMPVYNNPDANSLEAYDLASPCCDPHCVPHTRKKVRRKKECSKDHKRREKYQVDKSTQKPDNVPPPRMKKVCSSGHCSRYRYLTTESTQTSQCSLQSYATSNATVPCDNSASSYTTSLSSDTLFWDNDRSETKSSPKIQYQSSHQHVKPKSWDNLTTKAFGGYGFGYGYLDTTAKQSNRSKSHGRSHSGRSTQSHHEYQQHHEKHVHRQSANTQHYSVYTRSHSHYQPTKSTESLIVVPKYQLESSGSESRLACECTDSIEYYRRITTSKNPGEPQSANYYTPHFVYPSHSYKKRDSNVSSEITRL

Uniprot

H9ITW0   A0A2H1VR43   A0A0L7LPG5   A0A2A4JM58   A0A212FHF5   A0A194QVF0   + More
A0A194PSZ1   D6WIW9   A0A1W4WLS2   A0A1W4WAF5   A0A0T6AWK7   A0A1Y1L103   A0A1Y1L169   E0VZY6   U4US37   A0A067QXX5   A0A1B6DC19   T1HUB6   A0A0C9RQ07   A0A0C9RD57   A0A2P8ZDJ0   A0A1S4F8S8   A0A182GZG8   A0A158NE96   Q0IFI6   E9IEM2   E2A7X6   U5EDX6   A0A151J0E9   A0A151WSM7   B4LHD8   A0A195CCV7   A0A2J7QTV9   A0A2J7QTW7   A0A195BVG5   A0A3L8DBE6  

Pubmed

19121390    26227816    22118469    26354079    18362917    19820115    + More
28004739    20566863    23537049    24845553    29403074    17510324    26483478    21347285    21282665    20798317    17994087    30249741   

EMBL

BABH01007073    ODYU01003905    SOQ43246.1    JTDY01000420    KOB77274.1    NWSH01001054    + More
PCG72909.1    AGBW02008503    OWR53169.1    KQ461108    KPJ09299.1    KQ459594    KPI96083.1    KQ971337    EEZ99637.1    LJIG01022629    KRT79551.1    GEZM01067871    JAV67343.1    GEZM01067870    JAV67344.1    DS235854    EEB18941.1    KB632341    ERL92981.1    KK852893    KDR14215.1    GEDC01014080    JAS23218.1    ACPB03000724    GBYB01010600    JAG80367.1    GBYB01014524    JAG84291.1    PYGN01000089    PSN54572.1    JXUM01099620    JXUM01099621    KQ564506    KXJ72168.1    ADTU01013178    ADTU01013179    CH477317    EAT43728.1    GL762647    EFZ20987.1    GL437442    EFN70455.1    GANO01004553    JAB55318.1    KQ980636    KYN14941.1    KQ982769    KYQ50854.1    CH940647    EDW68468.2    KQ978023    KYM97918.1    NEVH01011192    PNF32026.1    PNF32027.1    KQ976401    KYM92572.1    QOIP01000010    RLU17830.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053240    UP000053268    + More
UP000007266    UP000192223    UP000009046    UP000030742    UP000027135    UP000015103    UP000245037    UP000069940    UP000249989    UP000005205    UP000008820    UP000000311    UP000078492    UP000075809    UP000008792    UP000078542    UP000235965    UP000078540    UP000279307   

PRIDE

H9ITW0   

Pfam

PF00595   PDZ        + More
PF17820   PDZ_6

Interpro

IPR036034   PDZ_sf        + More
IPR001478   PDZ       
IPR041489   PDZ_6       

SUPFAM

SSF50156   SSF50156       

ProteinModelPortal

H9ITW0   A0A2H1VR43   A0A0L7LPG5   A0A2A4JM58   A0A212FHF5   A0A194QVF0   + More
A0A194PSZ1   D6WIW9   A0A1W4WLS2   A0A1W4WAF5   A0A0T6AWK7   A0A1Y1L103   A0A1Y1L169   E0VZY6   U4US37   A0A067QXX5   A0A1B6DC19   T1HUB6   A0A0C9RQ07   A0A0C9RD57   A0A2P8ZDJ0   A0A1S4F8S8   A0A182GZG8   A0A158NE96   Q0IFI6   E9IEM2   E2A7X6   U5EDX6   A0A151J0E9   A0A151WSM7   B4LHD8   A0A195CCV7   A0A2J7QTV9   A0A2J7QTW7   A0A195BVG5   A0A3L8DBE6  

PDB

2EGO     E-value=1.03261e-14,     Score=197

KEGG

101740877    no KO assigned | (RefSeq) uncharacterized LOC101740877

GO

GO:0090307   GO:0005515   GO:0005509   GO:0016020   GO:0016021   GO:0005737   GO:0006813   GO:0006810   GO:0009072   GO:0007169  

Length:

619

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00106

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00073

outside

1  -  619

 

 

Pi

2.814407

Theta

3.518639

Tajima's D

-1.207499

CLR

0.095729

CSRT

0.0937953102344883

Interpretation

Uncertain