SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00313
Annotation
Uncharacterized_protein_OBRU01_04401_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 1.83
 

Sequence

CDS
ATGTGGCGGTGGTTGGTATTATGGCAAGCTTCGGTGTTACTTGTCGGCGGAACCCTTGACTTTGGCTACTTCACGCAGAAACGGCTTTTTACGCAACCTACAGAGGTAAACTGTGCAGGATACTCCAAATTTAATATCGATCACTTTCCTGATCTAATACACGCAGGTTGGCGCAGAAGTACTGATTTAGGTGAAAAAATGTTACAACAGCCTTCGTTAACGAAAAAAATTTCTCGTAGATATAATGATCTTTTACCGCCGAGCGCTGATGACATTGTGAAAGAACATGCTAAATTAGTGCAGGATATTAACAGCTTGAAACAAGTCGTATTTATTGCACCATTTCCCGATGATAACAGGGATTATGATGATTCCGTATTTCATGAAATCATTGAAACGACTTCTACTGTTAGACCCACATCAACTAAACGTCCAAGAAGGCCAATGAGACATAGTTCTATACCTATTATCTACCTAGGAGGCGCCAGTCAAAGTCACGTAGTAAAAAGTTCTCCATTAGAGTTTCCAAGGCCCACTATAAGTCTCATAGGGACGACATCATCGCCAGCTTTACATCCCTATCCGTTCGTGATGAAACCGCGAAAACCGTTTAAATTTTGTATACCCCCTGTACCTTTAATTTATACCACAACCACCCGACGGCCTTCATTTTGGGAACGATTCTTCAAATCGATAATACCTAAATAA
Protein
MWRWLVLWQASVLLVGGTLDFGYFTQKRLFTQPTEVNCAGYSKFNIDHFPDLIHAGWRRSTDLGEKMLQQPSLTKKISRRYNDLLPPSADDIVKEHAKLVQDINSLKQVVFIAPFPDDNRDYDDSVFHEIIETTSTVRPTSTKRPRRPMRHSSIPIIYLGGASQSHVVKSSPLEFPRPTISLIGTTSSPALHPYPFVMKPRKPFKFCIPPVPLIYTTTTRRPSFWERFFKSIIPK

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.864385
 
 
Length:
235
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.3848
Exp number, first 60 AAs:
14.27658
Total prob of N-in:
0.48061
POSSIBLE N-term signal
sequence
outside
1  -  235
 
 

Population Genetic Test Statistics

Pi
2.088663
Theta
11.367491
Tajima's D
-2.400407
CLR
0.01038
CSRT
0.00124993750312484
Interpretation
Uncertain
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