Gene

KWMTBOMO00311

Pre Gene Modal

BGIBMGA000538

Annotation

PREDICTED:_sodium/potassium/calcium_exchanger_4_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr1(-):9718178-9727364      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.775

CDS

ATGTATTATGACAAGCCTATACAGAATTTTGCGAAAGGGAGCTGGAAATGGGTATCAAACATGTTCAAAGATAATGAAGAGAAACAAGATGCAGAAAATGGTAAAGATTTAAAGTTATCGACCCATATACTAAAAATAGATGTACCTATAGAACAACGCCATCAACATAACGGTAATATTAAAACATCACCCCTTCGTCAAGATGCGAAAGAAAAGATTTTAGAAAGTGTCGATGTTTCGGATAAAGTTTCCGCCAGTGAAGAAGGAAAAGATAAAAATGTAAATATTGACATGGATTCTAAGCCTAATGAAATGGAAATCGCTAGCCCAGAGGAAAACTTATATCAGCCAACTGCAGAAGATAATAAAGATGTTGAAGATGGATCCGAGAACTCATTGTGGAAATGGCCTAGCAACAAGAGTTGCCTAGCTAAGATAACCAAAATTGTAACATGGCCCATTCACTTGGTGTTCCTGTTTACAATTCCAGATTGTGAGAAACCACGATTTAAAAACTGGTTTCCGCTTACTTTCATTATGTGTATTGTTTGGATCGGTTCACTGTCTTATATAGTTGCATGGATGATAACAATAATAGGTGATACGCTGATGATCCCAGATTCAGTTATGGGTATTACTTTTCTTGCTGCTGGCACTTCAGTTCCCGAAGCTGTTTCCAGCGTTATAGTAGCTAAGCAAGGGCATGGTTCGATGGGAATCAGTAACTCAATAGGATCGAATACATTTGATATTTTACTTTGCCTTGGCTTACCGTGGCTTATAAAAGCATCGCTAACTCCAGCCGAGCCAGGACATTATTGGGTTAAAATTAATTCAATGGGATTGGAATATTCTGCAATATCACTGCTATCGACGCTACTACTATTATATTTGACATTTTGGTTCAACAAATTCAAGTTAGATGCTGCAGTGGGGCGGGCGTGTCTCGCTATGTACGCCATGTTTTTAATTCTCGCAACACTAATCGAACTTAATGTTTTCTTCCCTGTTAATGTGCGTACTTGCAAAAGAGCGGATATGAAATCTTAA

Protein

MYYDKPIQNFAKGSWKWVSNMFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNKDVEDGSENSLWKWPSNKSCLAKITKIVTWPIHLVFLFTIPDCEKPRFKNWFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVAKQGHGSMGISNSIGSNTFDILLCLGLPWLIKASLTPAEPGHYWVKINSMGLEYSAISLLSTLLLLYLTFWFNKFKLDAAVGRACLAMYAMFLILATLIELNVFFPVNVRTCKRADMKS

Similarity

Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.

Uniprot

H9ITF8   A0A212FHI7   A0A2H1VGF6   A0A194PRF3   A0A194QV57   A0A1L8DKB0   + More
A0A182SIM2   A0A1Y1NCJ3   A0A182MWZ5   A0A1Q3F4U3   A0A182UF58   A0A1Q3F8D1   A0A1Q3F6G6   A0A182Q3F4   A0A182VCE2   B0WBJ0   A0A1Y9IQL5   A0A2C9GRI1   A0A139WHN8   D6WM86   A0A2C9GR95   Q17BT7   A0A0K8TR74   A0A1Y9HEX0   A0A182KKG3   A0A1Y9HEN1   A0A336MUC1   E9ILJ7   A0A1S4F8V0   V9IJD3   A0A182PDA0   A0A336MNS1   A0A151IEJ3   E2AFY1   A0A151X368   A0A088AGL0   A0A182WUK7   A0A195EEX2   A0A0L7RBA1   N6US54   A0A0M9A5C6   A0A182N2P3   A0A182WE41   A0A0C9R7C9   A0A0C9QTZ9   A0A232EVX5   A0A0J7KT61   A0A1B6LX38   E0VRE9   A0A1B6KAW2   A0A067RBZ5   A0A0A9XWU9   A0A1B6D9C7   A0A023EZI4   A0A224XMZ1   T1PAS6   A0A1A9ZGN1   A0A1A9VRJ1   A0A1I8PME2   A0A1I8MJH1   A0A1I8MJH2   A0A0Q9X1V3  

Pubmed

19121390    22118469    26354079    28004739    18362917    19820115    + More
17510324    26369729    20966253    21282665    20798317    23537049    28648823    20566863    24845553    25401762    26823975    25474469    25315136    17994087   

EMBL

BABH01007068    AGBW02008503    OWR53184.1    ODYU01002426    SOQ39897.1    KQ459594    + More
KPI96031.1    KQ461108    KPJ09352.1    GFDF01007300    JAV06784.1    GEZM01007300    GEZM01007299    JAV95258.1    AXCM01008494    GFDL01012463    JAV22582.1    GFDL01011221    JAV23824.1    GFDL01011884    JAV23161.1    AXCN02001080    DS231879    EDS42429.1    APCN01001433    KQ971343    KYB27277.1    EFA04235.2    CH477316    EAT43776.1    GDAI01000724    JAI16879.1    UFQS01002006    UFQT01002006    SSX12941.1    SSX32383.1    GL764090    EFZ18554.1    JR047566    AEY60444.1    UFQT01001835    SSX31956.1    KQ977870    KYM99226.1    GL439180    EFN67657.1    KQ982562    KYQ54887.1    KQ978983    KYN26788.1    KQ414617    KOC68021.1    APGK01018911    KB740085    KB632303    ENN81547.1    ERL91812.1    KQ435752    KOX76189.1    GBYB01012229    JAG81996.1    GBYB01007219    JAG76986.1    NNAY01001938    OXU22504.1    LBMM01003406    KMQ93567.1    GEBQ01029570    GEBQ01011783    GEBQ01005432    GEBQ01003374    JAT10407.1    JAT28194.1    JAT34545.1    JAT36603.1    DS235465    EEB15955.1    GEBQ01031390    GEBQ01026499    GEBQ01018163    GEBQ01007137    JAT08587.1    JAT13478.1    JAT21814.1    JAT32840.1    KK852804    KDR16218.1    GBHO01020256    GBRD01011629    GDHC01019424    JAG23348.1    JAG54195.1    JAP99204.1    GEDC01015015    JAS22283.1    GBBI01004059    JAC14653.1    GFTR01006474    JAW09952.1    KA645023    AFP59652.1    CH963851    KRF98188.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000075901    UP000075883    + More
UP000075902    UP000075886    UP000075903    UP000002320    UP000075840    UP000007266    UP000008820    UP000075900    UP000075882    UP000075885    UP000078542    UP000000311    UP000075809    UP000005203    UP000076407    UP000078492    UP000053825    UP000019118    UP000030742    UP000053105    UP000075884    UP000075920    UP000215335    UP000036403    UP000009046    UP000027135    UP000092445    UP000078200    UP000095300    UP000095301    UP000007798   

PRIDE

H9ITF8   

Pfam

PF01699   Na_Ca_ex

Interpro

IPR004837   NaCa_Exmemb        + More
IPR004481   K/Na/Ca-exchanger       
IPR004836   Na_Ca_Ex       

ProteinModelPortal

H9ITF8   A0A212FHI7   A0A2H1VGF6   A0A194PRF3   A0A194QV57   A0A1L8DKB0   + More
A0A182SIM2   A0A1Y1NCJ3   A0A182MWZ5   A0A1Q3F4U3   A0A182UF58   A0A1Q3F8D1   A0A1Q3F6G6   A0A182Q3F4   A0A182VCE2   B0WBJ0   A0A1Y9IQL5   A0A2C9GRI1   A0A139WHN8   D6WM86   A0A2C9GR95   Q17BT7   A0A0K8TR74   A0A1Y9HEX0   A0A182KKG3   A0A1Y9HEN1   A0A336MUC1   E9ILJ7   A0A1S4F8V0   V9IJD3   A0A182PDA0   A0A336MNS1   A0A151IEJ3   E2AFY1   A0A151X368   A0A088AGL0   A0A182WUK7   A0A195EEX2   A0A0L7RBA1   N6US54   A0A0M9A5C6   A0A182N2P3   A0A182WE41   A0A0C9R7C9   A0A0C9QTZ9   A0A232EVX5   A0A0J7KT61   A0A1B6LX38   E0VRE9   A0A1B6KAW2   A0A067RBZ5   A0A0A9XWU9   A0A1B6D9C7   A0A023EZI4   A0A224XMZ1   T1PAS6   A0A1A9ZGN1   A0A1A9VRJ1   A0A1I8PME2   A0A1I8MJH1   A0A1I8MJH2   A0A0Q9X1V3  

KEGG

101740106    no KO assigned | (RefSeq) sodium/potassium/calcium exchanger 4

GO

GO:0016021   GO:0055085   GO:0070588   GO:0008273   GO:0006874   GO:0005262   GO:0005887   GO:0005432   GO:0006816   GO:0016020   GO:0005737   GO:0006813   GO:0006810   GO:0009072   GO:0007169  

PANTHER

PTHR10846  

Length:

349

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

99.05226

Exp number, first 60 AAs:

0

Total prob of N-in:

0.96418

inside

1  -  175

TMhelix

176  -  198

outside

199  -  207

TMhelix

208  -  230

inside

231  -  279

TMhelix

280  -  302

outside

303  -  316

TMhelix

317  -  339

inside

340  -  349

 

 

Pi

16.663259

Theta

16.557382

Tajima's D

0.294533

CLR

0.167289

CSRT

0.453977301134943

Interpretation

Uncertain