Gene

KWMTBOMO00306

Pre Gene Modal

BGIBMGA000684

Annotation

PREDICTED:_insulin-like_growth_factor-binding_protein_complex_acid_labile_subunit_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(+):9552578-9554641      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.107

CDS

ATGTCATCTTTGGTCGTATATAATACGGAGGCCGCAGGGACAATCTGCCCTGATGAATGTACTTGTACTATGACATTTGATCTCGAAGAAGGCCATACAACGCAAGTGGCTTGTCAGCATGGACACATGAGGATAATCCCGGTCGACTACATGGACCGTGACGTGCATGTTGTTATTATAGCCGCTCCTCCGGATCGACCTAACTTTTTAACCATTGGACCCATATTTACTCAACCAGCCCCATTTGTAAACCTTCGCGAACTTCACATTGTTAATTCCAATGTACCGTCGATTGGGCAATTTTCCTTTTGGGGCCTGCAAAATTTAAGAGTTTTAAATTTGACACACAACAACCTTACGAGTGTAGTAGCTGATAATTTTAGAGGTCTCATAAATCTTACTGAACTTCATCTCGATCATAATCATATCGAACAGATGTCAAGCGAGACTTTCAGACACCTGACCTCATTAAAAACTCTAATATTGGCCAATAATCAAATATCGACACTCGTGTCGAGGTTGTTTAGAATGCTGGCGAAGTTGTCTATTTTGGATTTGAGTGACAACCCATTAACTGACTTGAACCCTGAAGTTTTTAAAGATATTCAACACTTGCGAATATTTAAATGTAGAAGATGTTTACTGAGACGCATAAACACACAAATTTATCATTTAGTACCTAGACTCGAGGAATTGGATTTGGGTGAAAATTTATTTAAATACTTAACATCAGATGAATTCATAAGCTTGAAGCGATTAAAAAAATTAAAATTGGACGGGAATCAATTGTCAGTAATCGTGGACAACATGTTTGGACGGAACCGGGAACTCCACGTACTAACATTATCACGCAACCGTCTAGCCCTCTTGGCGCCATTGGCCCTCACTAATCTAACCGCCCTCACACATTTGGATATAAGTCATAACAAAATTGACAGGTTCCATTTGCAAACTTTCGCTCCGGTTGTGGACTCCTTAAAAACAATAAATTTCAGTGGAAATAATTTACCACTAAACGAAATTGCTATCGTATTACAAATACTACCAGAGATTCATGGAGTAGGCTTAGCCAACTTGTCACTGCAAGAAATACCTCAAAATTTCTTTACATACAACGAGCATCTCGTGGCTTTGGACTTATCTTGGAATAAATTATCCAGGTTTCCCTTCAAACTTCTATCTAAGACAAAGTTTTTACAGCGATTAGATATATCGCACAACAAGTTACAAACCTTAAGCGAACAGGATTTGCAAAGATTGGAAGCTATAGCTGAAGTAAACTTAATGAAAAATAATTGGCATTGCGATCAATGTTCGGCGAGTAATATGCTTTTGTACATGACCACAACAGTCCTTAACAGTACAATACGAGTCCTCAAATGCCACTCCCCGTTAAGATTGCGAGGCGCAACTTTTGGTAGTCTGAGTTTTGAGCAATTGGATCCATGTCCGACGACACATGAAGCACAAATGAGTGTCATTGCGGGATTAATGCTGTTATGTGTAGCTGTCCTCTCAGCAGTAGCTGCGGCGCTTTGCTGTACACGACGTCGCGCCGCCCAATACTATACCAATGAAGAAAAGCGTAGAGAACACGATCATGAACATCCAGAAGAACTGCTTGGACATACGGAACTTGGCAGCGTCGCTACTATCCACGCGCCGTACCAACTCGTCTCTAAGGACAGCTAA

Protein

MSSLVVYNTEAAGTICPDECTCTMTFDLEEGHTTQVACQHGHMRIIPVDYMDRDVHVVIIAAPPDRPNFLTIGPIFTQPAPFVNLRELHIVNSNVPSIGQFSFWGLQNLRVLNLTHNNLTSVVADNFRGLINLTELHLDHNHIEQMSSETFRHLTSLKTLILANNQISTLVSRLFRMLAKLSILDLSDNPLTDLNPEVFKDIQHLRIFKCRRCLLRRINTQIYHLVPRLEELDLGENLFKYLTSDEFISLKRLKKLKLDGNQLSVIVDNMFGRNRELHVLTLSRNRLALLAPLALTNLTALTHLDISHNKIDRFHLQTFAPVVDSLKTINFSGNNLPLNEIAIVLQILPEIHGVGLANLSLQEIPQNFFTYNEHLVALDLSWNKLSRFPFKLLSKTKFLQRLDISHNKLQTLSEQDLQRLEAIAEVNLMKNNWHCDQCSASNMLLYMTTTVLNSTIRVLKCHSPLRLRGATFGSLSFEQLDPCPTTHEAQMSVIAGLMLLCVAVLSAVAAALCCTRRRAAQYYTNEEKRREHDHEHPEELLGHTELGSVATIHAPYQLVSKDS

Uniprot

H9ITV4   A0A2A4J7G7   A0A194QVC6   A0A2H1WC35   A0A194PTM7   A0A212ETF3   + More
A0A0L7LKI9   A0A2P8XRJ1   A0A067QIL7   A0A1B6CGE8   A0A1B6M847   D6WMZ1   A0A2R7W3J2   A0A1S3CYG3   A0A1J1HVX9   Q16P50   A0A1W4WD78   A0A1I8MYU9   W8BWZ3   A0A182REW8   A0A182WGL1   A0A1I8PV42   A0A2P6L4Z1   N6UNP4   A0A1A9WMF3   A0A226ES49   A0A1Y1KFD8   A0A182M6A0   A0A1B0EYS2   A0A087SZ97   A0A182F2W7   A0A0L0BY75   A0A1B0AGS2   A0A0A1XCU3   B4JCA8   A0A1A9YFQ8   W5JC04   A0A336M357   A0A336LR43   A0A182YPT0   A0A0T6BA38   T1JDL4   A0A0K8UAG2   A0A0K8UDI3   F0JAM7   A0A084WG87   A0A182VHT2   A0A182JGD4   A0A3B0JD60   Q7Q1I6   A0A182XNA9   A0A182NBT4   A0A182KTZ6   A0A182U0Z6   B3MMF1   B4MYU0   B4Q8D7   B3NME1   A0A336LUR9   Q9VJA9   A0A1B0APZ5   A0A0R1DNT0   A0A182HRV3   B4P8N5   Q29LC8   A0A1B0G273   B4GQ71   B4I5E1   A0A1W4VHG8   D6WMY6   A0A0Q9WN82   B4KEF9   B4LSW3   A0A386H7K0   A0A1W4WJZ7   A0A131YZV6   A0A0Q9XIC9   X2J6K6   A0A182PUX8   A0A226DE00   A0A182KDI6   A0A0P4WAM5   A0A0P5DDD8   A0A0P5DF35   A0A0P5Y4R8   A0A0P4YYW4   A0A0P6GKW4   A0A0P4YDI6   A0A0P5TM99   A0A0P6C180   A0A0P5VLI3   A0A182Q1C3   A0A0P5VP45   A0A087UKM2   A0A0N8D3R3   A0A1B0CB91  

Pubmed

19121390    26354079    22118469    26227816    29403074    24845553    + More
18362917    19820115    17510324    25315136    24495485    23537049    28004739    26108605    25830018    17994087    20920257    23761445    25244985    24438588    12364791    20966253    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    23185243    18057021    26830274   

EMBL

BABH01007044    NWSH01002890    PCG67362.1    KQ461108    KPJ09274.1    ODYU01007655    + More
SOQ50623.1    KQ459594    KPI96109.1    AGBW02012593    OWR44782.1    JTDY01000765    KOB75962.1    PYGN01001473    PSN34628.1    KK853309    KDR08672.1    GEDC01024786    JAS12512.1    GEBQ01007874    JAT32103.1    KQ971343    EFA03262.2    KK854293    PTY14284.1    CVRI01000024    CRK92173.1    CH477794    EAT36134.1    GAMC01005152    JAC01404.1    MWRG01001786    PRD33658.1    APGK01024659    KB740558    KB632357    ENN80352.1    ERL93465.1    LNIX01000002    OXA59416.1    GEZM01089477    JAV57487.1    AXCM01004563    AJVK01005576    AJVK01005577    KK112645    KFM58186.1    JRES01001166    KNC24921.1    GBXI01005526    JAD08766.1    CH916368    EDW04141.1    ADMH02001647    ETN61576.1    UFQT01000121    SSX20428.1    SSX20430.1    LJIG01002738    KRT84202.1    JH432107    GDHF01028690    GDHF01026135    JAI23624.1    JAI26179.1    GDHF01027678    JAI24636.1    BT126069    ADY17768.1    ATLV01023473    KE525343    KFB49231.1    OUUW01000004    SPP79995.1    AAAB01008980    EAA14468.4    CH902620    EDV30897.1    CH963913    EDW77279.2    CM000361    CM002910    EDX05347.1    KMY90762.1    CH954179    EDV54812.1    SSX20429.1    AE014134    BT004502    AAF53643.2    AAO42666.1    JXJN01001618    CM000158    KRJ98954.1    APCN01001755    APCN01001756    EDW90143.1    CH379060    EAL34117.1    KRT04480.1    KRT04481.1    KRT04482.1    CCAG010011277    CCAG010011278    CH479187    EDW39743.1    CH480822    EDW55597.1    EFA04323.2    CH940649    KRF81909.1    CH933807    EDW12927.2    EDW64874.1    KRF81907.1    KRF81908.1    KRF81910.1    MG452691    AYD41578.1    GEDV01004379    JAP84178.1    KRG03496.1    AHN54538.1    LNIX01000022    OXA43350.1    GDRN01073811    JAI63330.1    GDIP01173966    JAJ49436.1    GDIP01157237    JAJ66165.1    GDIP01062996    JAM40719.1    GDIP01220122    JAJ03280.1    GDIQ01032062    GDIQ01001434    JAN62675.1    GDIP01230068    GDIP01187724    GDIP01125419    GDIP01124372    JAI93333.1    GDIP01124373    LRGB01000005    JAL79341.1    KZS22027.1    GDIP01006268    JAM97447.1    GDIP01113033    JAL90681.1    AXCN02000690    GDIP01097379    JAM06336.1    KK120269    KFM77911.1    GDIP01071743    JAM31972.1    AJWK01004899   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000245037    UP000027135    UP000007266    UP000079169    UP000183832    UP000008820    UP000192223    UP000095301    UP000075900    UP000075920    UP000095300    UP000019118    UP000030742    UP000091820    UP000198287    UP000075883    UP000092462    UP000054359    UP000069272    UP000037069    UP000092445    UP000001070    UP000092443    UP000000673    UP000076408    UP000030765    UP000075903    UP000075880    UP000268350    UP000007062    UP000076407    UP000075884    UP000075882    UP000075902    UP000007801    UP000007798    UP000000304    UP000008711    UP000000803    UP000092460    UP000002282    UP000075840    UP000001819    UP000092444    UP000008744    UP000001292    UP000192221    UP000008792    UP000009192    UP000075885    UP000075881    UP000076858    UP000075886    UP000092461   

PRIDE

H9ITV4    F0JAM7   

Pfam

PF13516   LRR_6        + More
PF13855   LRR_8
PF00560   LRR_1
PF13306   LRR_5
PF12799   LRR_4
PF05725   FNIP

Interpro

IPR032675   LRR_dom_sf        + More
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR000483   Cys-rich_flank_reg_C       
IPR026906   LRR_5       
IPR000372   LRRNT       
IPR025875   Leu-rich_rpt_4       
IPR008615   FNIP       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9ITV4   A0A2A4J7G7   A0A194QVC6   A0A2H1WC35   A0A194PTM7   A0A212ETF3   + More
A0A0L7LKI9   A0A2P8XRJ1   A0A067QIL7   A0A1B6CGE8   A0A1B6M847   D6WMZ1   A0A2R7W3J2   A0A1S3CYG3   A0A1J1HVX9   Q16P50   A0A1W4WD78   A0A1I8MYU9   W8BWZ3   A0A182REW8   A0A182WGL1   A0A1I8PV42   A0A2P6L4Z1   N6UNP4   A0A1A9WMF3   A0A226ES49   A0A1Y1KFD8   A0A182M6A0   A0A1B0EYS2   A0A087SZ97   A0A182F2W7   A0A0L0BY75   A0A1B0AGS2   A0A0A1XCU3   B4JCA8   A0A1A9YFQ8   W5JC04   A0A336M357   A0A336LR43   A0A182YPT0   A0A0T6BA38   T1JDL4   A0A0K8UAG2   A0A0K8UDI3   F0JAM7   A0A084WG87   A0A182VHT2   A0A182JGD4   A0A3B0JD60   Q7Q1I6   A0A182XNA9   A0A182NBT4   A0A182KTZ6   A0A182U0Z6   B3MMF1   B4MYU0   B4Q8D7   B3NME1   A0A336LUR9   Q9VJA9   A0A1B0APZ5   A0A0R1DNT0   A0A182HRV3   B4P8N5   Q29LC8   A0A1B0G273   B4GQ71   B4I5E1   A0A1W4VHG8   D6WMY6   A0A0Q9WN82   B4KEF9   B4LSW3   A0A386H7K0   A0A1W4WJZ7   A0A131YZV6   A0A0Q9XIC9   X2J6K6   A0A182PUX8   A0A226DE00   A0A182KDI6   A0A0P4WAM5   A0A0P5DDD8   A0A0P5DF35   A0A0P5Y4R8   A0A0P4YYW4   A0A0P6GKW4   A0A0P4YDI6   A0A0P5TM99   A0A0P6C180   A0A0P5VLI3   A0A182Q1C3   A0A0P5VP45   A0A087UKM2   A0A0N8D3R3   A0A1B0CB91  

PDB

5Z8Y     E-value=2.22068e-22,     Score=263

KEGG

101743131    no KO assigned | (RefSeq) insulin-like growth factor-binding protein complex acid labile subunit

GO

GO:0016021   GO:1990399   GO:0008056   GO:2000035   GO:0005515   GO:0008270   GO:0007155   GO:0031532   GO:0007186   GO:0006810   GO:0009072   GO:0007169  

Length:

563

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.46671

Exp number, first 60 AAs:

0.00034

Total prob of N-in:

0.00496

outside

1  -  492

TMhelix

493  -  515

inside

516  -  563

 

 

Pi

5.678825

Theta

5.572827

Tajima's D

-0.506951

CLR

0.023838

CSRT

0.241437928103595

Interpretation

Uncertain