SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00304
Annotation
reverse_transcriptase_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.013 Nuclear   Reliability : 1.741
 

Sequence

CDS
ATGTCCGAACACCGACCTGTTGTCATGCAGCTCGGTCGTCTTTACACACAAGAGCCAGTCGCGAGGACCATGGTGGATGGGCAGAAACCGAACAGCAAGCTGGCAGAAGACTTCCCGCCAATCCTCCGTTACAGCTCGGATTTGGTTGCGTCATCTACAGCAGGACGTCATATCTCGTCTAGAGAAAGCCCGAAATACAAGTATGCCTTCCCTCGTATTCCCCTAAGACCAACCCCCGGTTTTGATGACGATGAAAAGGCAGAACTGGCCGATGCACTGCAACCAGTGCTCAAACCGCGGTCCCTGAACACACCCATGTGGAGAGAAGTGAACTTTATCGGCATACACAAACCTGGAAAACCTAAAATCGAACCCATAAGCTACCGCCCGATTAGCCTCCTCCCAGCCACAGGCAAGCTGTATGAACGACTGATTCGTAAACGCCTCTGGGACTTTATCACCTCAAAAGGCATCCTCATAAATGAACAGCTCGGATTCCGCGTCAGCATTCGTGCATCCAACAAGTGCACCGCTTCAAGGAGCACATCTTAA
Protein
MSEHRPVVMQLGRLYTQEPVARTMVDGQKPNSKLAEDFPPILRYSSDLVASSTAGRHISSRESPKYKYAFPRIPLRPTPGFDDDEKAELADALQPVLKPRSLNTPMWREVNFIGIHKPGKPKIEPISYRPISLLPATGKLYERLIRKRLWDFITSKGILINEQLGFRVSIRASNKCTASRSTS

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
183
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00774
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.12917
outside
1  -  183
 
 

Population Genetic Test Statistics

Pi
5.287196
Theta
11.86439
Tajima's D
-1.537331
CLR
0.004046
CSRT
0.0553972301384931
Interpretation
Uncertain
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