SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00300  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000542
Annotation
putative_ATPase_family_AAA_domain-containing_protein_3_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.688 Mitochondrial   Reliability : 1.403 Nuclear   Reliability : 1.218
 

Sequence

CDS
ATGTCGTGGCTATTTGGGTACAGTTCAAAACCTCCACAACCTCCTCCTTCGGACGATCCACCAGCCGATGGGGTTGGTGTTGCCGCACCTTCTACTAACCTTTCTAAATCAGAGAGGAAAGCCATGGAAGCCTACCGGTTTGATTCAAGTGCCCTAGAGCGAGCTGCATCGGCTGCAAAAGAGCTGGAACGATCAAGACATGCAAAAGATGCTTTGGAGCTTAGTAAACTTCAGGAAAGTACTCGACAACAGGAGCAAATGGCCAAGATTAAGGAATATGAAGCAGCCATTGAACAAGCTAAAGTAGAACAAAAGAAAGTTGATTATGAAGAAAGACGAAAAACATTACAGGAAGAAACAAAACAGCACCAAATGAGAGCTCAATACCAAGATCAATTAGCTAAAAAACGTTACGAAGAACAACTTGTACAACAACAGAAATCTCAAGAAGAAATTCTCAGAAAACAAGAAGAGAGTGTAGCAAAACAGGAAGCCTTAAGGAGAGCTACTATAGAACATGAAATGGAGCTGCGAGAGAAAAATAAATTGAGAGCAATAGAAGCAGAAGCTCGAGCCAAAGCGCAGGCTGACAGAGAAAATCGAGACATAAATCTTGAACAAATTAGACTAAAGGCTGCTGAGAACAGAGTTACTATTCTAGAAAGTATAAAGACAGCTGGGAGCGTAGTAGGTTCTGGTCTGAATGCATTAGTGACAGATTGGGATAAAACTTTAGCTGCTGCAGGGGGTTTGTCATTATTGGCACTTGGTGTTTATTCAGCAAAGGGAGCCACATCGGTTGCAGCTAGATTCATTGAGGCTCGCATTGGAAAACCCACACTTGTTAATGAAACCTCAAGATTTTCATTGTTAGAGGCAGTTAAACATCCTATATTGACAGTTTCAAAAGCTGTTTCGAGTTTTAGAAAACCTCAGGATGCTCTGGCTGGTGTAGTTCTAGCTCCAAATCTGGAAAAAAGATTGAGAGACATTGCGATTGCTACAAAAAATACTAGATTGAATAAAGGTTTTTATAGAAACTTGCTCATGTATGGACCTCCTGGAACAGGAAAAACATTGTTTTCCAAGAAACTTGCAAAACATTCTGGTATGGATTATGCCATAATGACGGGTGGTGATGTTGCTCCTATGGGCAAAGATGCAGTAGCAGCTATCCATAAAGTATTTGACTGGGCAAACACCAGCAGGAAAGGTGTTCTTGTTTTCATTGATGAAGCAGACGCATTCTTGAGAAAACGTTCTTCAGAAAAAATCAGTGAGGATTTAAGAGCAGCATTGAATGCATTCCTCTACAGAACTTCTGACCAAAGCAGCAGGATTATGTTGGTTTTGGCCTCGAACACACCTCAACAATTTGATTCTGCTATCAATGACCGTCTCGACAAAATGATTGAATTTGGTTTGCCAGCTCTTGAAGAGAGAGAAAGATTGATTCGCCTTTATTTTGATAAATTTGTTCTGCAACCAGCATCTGAAGGAAAGAGACGATTAAGCGTTGATCAATTTGACTATGGTGCTCTGTGTTCGACCTTGGCAACGAGAACAGCTGGTATGTCTGGTAGAGCACTTTCAAAATTGGGTGTGGCATGGCAAGCCGCCGCCTACGCCTCTGATGATGGTCGTCTCACCGAACAAATGTGTATCGACATTTGTGATGATGCTGTCAGAGATCATCGGCAAAAGATGGAGTGGCTATCAGCTGAAGAGAAAAGTCGTAGTATGATGCCATATTTATTAGACTTGCCCCCCTTAGATACCAAGGATGATACCTCGAATAAAATTAATGTTATAGAAAAAGATACCAATGATGATAGTACCAAGATAAAGCCCAAATCTAAGGCAAAGGTAGCAAAGGAATTTGATAAAGATAAGTGA
Protein
MSWLFGYSSKPPQPPPSDDPPADGVGVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKLRAIEAEARAKAQADRENRDINLEQIRLKAAENRVTILESIKTAGSVVGSGLNALVTDWDKTLAAAGGLSLLALGVYSAKGATSVAARFIEARIGKPTLVNETSRFSLLEAVKHPILTVSKAVSSFRKPQDALAGVVLAPNLEKRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSDQSSRIMLVLASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDYGALCSTLATRTAGMSGRALSKLGVAWQAAAYASDDGRLTEQMCIDICDDAVRDHRQKMEWLSAEEKSRSMMPYLLDLPPLDTKDDTSNKINVIEKDTNDDSTKIKPKSKAKVAKEFDKDK

Summary

EMBL
BABH01007028    ODYU01007654    SOQ50619.1    AGBW02012593    OWR44778.1    KQ459594    + More
KPI96115.1    GAIX01004715    JAA87845.1    CVRI01000047    CRK97822.1    KQ971343    EFA04396.1    GEZM01011991    JAV93310.1    LJIG01022607    KRT79663.1    DS231976    EDS30067.1    GFDL01015053    JAV19992.1    CH477621    EAT38187.1    JXUM01040714    KQ561256    KXJ79205.1    AXCM01000914    AXCN02000208    APGK01044818    KB741028    KB632297    ENN74805.1    ERL91701.1    AAAB01008987    EAA01146.4    APCN01005946    GFDF01004307    JAV09777.1    MF441472    ASV50719.1    KK852675    KDR18714.1    ATLV01017674    KE525181    KFB42375.1    NEVH01000611    PNF43273.1    GGFK01007779    MBW41100.1    GGFJ01003467    MBW52608.1    ADMH02001926    ETN60479.1    GANO01001764    JAB58107.1    KQ438551    KOX67186.1    GFDL01015079    JAV19966.1    GDHF01026244    GDHF01018154    JAI26070.1    JAI34160.1    GDKW01001489    JAI55106.1    GL732577    EFX75204.1    GBXI01001506    JAD12786.1    LRGB01001920    KZS10018.1    GBYB01009015    JAG78782.1    GDIP01025557    JAM78158.1    GAKP01002764    JAC56188.1    UFQT01000038    SSX18406.1    GDIQ01018432    JAN76305.1    GDIP01225483    JAI97918.1    GEDC01024034    JAS13264.1    CM000070    EAL28614.1    ACPB03001027    ACPB03001028    GBGD01000759    JAC88130.1    CH933806    EDW15141.2    GBBI01000249    JAC18463.1    KA645745    AFP60374.1    GDIP01235240    JAI88161.1    GDIQ01150275    JAL01451.1    GDIQ01069211    JAN25526.1    GDIQ01051970    JAN42767.1    GL437382    EFN70523.1    GECL01002571    JAP03553.1    GDIQ01086156    JAN08581.1    KZ288427    PBC25891.1    GFTR01007650    JAW08776.1    CH940650    EDW66655.1    GANP01004624    JAB79844.1    GACK01005036    JAA59998.1    GEBQ01002712    JAT37265.1    GBHO01018194    GBRD01005259    GDHC01012558    JAG25410.1    JAG60562.1    JAQ06071.1    KQ434856    KZC08690.1    GL447569    EFN86374.1    AAZX01011302    KQ976528    KYM81846.1    KQ414614    KOC68815.1    JXJN01021671    GECZ01008139    JAS61630.1    GGLE01006450    MBY10576.1    ADTU01024478    ADTU01024479    GL888186    EGI65560.1    KQ978457    KYM93839.1    KQ981208    KYN44675.1    GFPF01006251    MAA17397.1    GEDV01005233    JAP83324.1    GBBM01000674    JAC34744.1    KQ983136    KYQ47101.1   
Pfam
PF12037   DUF3523        + More
PF00004   AAA
Interpro
IPR003959   ATPase_AAA_core        + More
IPR021911   DUF3523       
IPR027417   P-loop_NTPase       
IPR039188   ATAD3       
IPR003593   AAA+_ATPase       
SUPFAM
SSF52540   SSF52540       
PDB
5W0T     E-value=1.88113e-12,     Score=177

Ontologies

Topology

Length:
631
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0575800000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00182
outside
1  -  631
 
 

Population Genetic Test Statistics

Pi
0.604465
Theta
6.962857
Tajima's D
-2.501932
CLR
0
CSRT
0.000499975001249937
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 VFDWANTSR 100.00 5e-08
28467696 HSGHVSAIDVNPYQK 100.00 5e-08
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