Gene

KWMTBOMO00295

Pre Gene Modal

BGIBMGA000544

Annotation

PREDICTED:_leucine-rich_repeat-containing_G-protein_coupled_receptor_4_[Amyelois_transitella]

Location

Bomo_Chr1(-):9352771-9359127      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.913 Nuclear   Reliability : 1.785

CDS

ATGACGAGCACGAGACTATCCGGCACACCCATTTTGAATAGTTTTACAAATCAAACCGTTGTGCCAGACTTTGTCGAACGCTTTTGCGACGTCGAAGAAGAGGGCTCCCGTGTAGATTGGTTTTGGTCGGTTAAGCCCTACGAGAATGTGCTCCGTGAGGCAGTGCACCTGTTTGTGCTAAAGGAAAGCGTCTTTACCAAATTGGATTTGGTGGATTACTTCAGCTTAGCAGACAACTCTTTGCCGGAGTTACCAAGGCATGTGCTTCAGCACCTGCCTCACGTAAAGACACTCGATCTCTGTAGGAACAAGATAACTAAGCTCACCGAAGAAGATTTCCGGGATATTCAAGAATTGGAGCATTTGTTGGTCGCTGACAATCAAATATCAGAAATAGAAAAAGACGCGTTGCCTAAGGGGTTAAAACATGTACATCTAGGAATCAATAAATTAAACACATTGAACGGAGCTCTCAGAGATTTGGATGATCTAGAATGGATTTTTATCAATGCCAATAATCTAAAATCTATTGAGAACGAATTACCCACAAAAGCCAAAAAAATGCAACTTATTCATGCAGCACACAACGAGCTTCAAAGTTTACCGAGCGATTTAAAACTAATGCCATCGCTACAGTCTTTGTACTTCTATGGAAACAACATTAAATCTCTGGACGAAACTTTGCAAAAATCAAGAAATCTCATGAGAATAGGACTTTCATTCAATAAAATCGAATTTTTGACTAAAGACGATTTCACTGAAGCAGAAAAGTTAGCTGAACTAGACATCGCATACAATGAACTGAAATATTTGAATGGCTCCTTGAGAAGTTTAAAATCATTACGATACTTGAACTTGACACACAACTATATGACTGAATTTTCATTGCAAGAAATTAAAGGTCTCAGAAGACTATCTGTGATAGATCTTTCCCACAATCAAATAAGTCTTCTTACCGGGAGCTTGGAAAATTTAGTAGATGTCGAAACACGCGTTTTGGAGTTGCGATTAGACCACAATCATATCTTCAATTTAGGTGGAGCGCTAATGGGTCTTCACGGTTTATTGCGACTTAATTTGAGCAACAATCTCATTCAAAAAATTTTACCGGATGACCTTTTAGGTCTAGAAGACTTGAGGCTACTTGATGTCTCGTACAATCATATTACAACTTTAGAAGAAACGTCGAAGACATTCTTGCCGTCACTTGAAGAGTTGATAGCACATCACAATAACATAACAGTCCTGGATAAAGATTTTCATGGATTGCCGTCACTTTGTTCTGCTGATCTATCGTTCAACAAAATCCACACAGTAAATTATGACCTAGTTTCGAAGTCACGATGTACCATTAACGGAGTGCCTAGTATTTTGAAGATTTATCTTCAAGATAATCCTGTGTTGTGCGACGACCATCTTTACGAACTGGTGACAGTATTTGAGAGTCTGAATGCTCGTGTTAGTGGAGCATCTACCTGTGTCGCCCCACAAACCACGGCGCCAATTTTGATGCGGGCTCTCAACGATATTGGGCCAAAGAAAGAAAATTCACCACTAATCGTTGTGGCACACATGGTCCCTGATATTCGTTTGGCGCCGCAAGATAATTTAAATCATGAAACTGTATCGTCTGCAATTCCTCAATTTGTATACAGACGAGTTAACCCTCTGTACCGCCATGTACTGCCAGATCAAGAAGATGGAATATCGGTAATAGCAGACCCTCCGTTAACGTTACCATCTACAAATAGGAAAGTTGTCGTAAAGTGGCCAGAAGAAACCAGAATTGATAAACCCTCGCATCCTTTAGCTGACCAAATGCGTCTGCGCGAACTCAACGAATCACCACAGTGA

Protein

MTSTRLSGTPILNSFTNQTVVPDFVERFCDVEEEGSRVDWFWSVKPYENVLREAVHLFVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALPKGLKHVHLGINKLNTLNGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEFSLQEIKGLRRLSVIDLSHNQISLLTGSLENLVDVETRVLELRLDHNHIFNLGGALMGLHGLLRLNLSNNLIQKILPDDLLGLEDLRLLDVSYNHITTLEETSKTFLPSLEELIAHHNNITVLDKDFHGLPSLCSADLSFNKIHTVNYDLVSKSRCTINGVPSILKIYLQDNPVLCDDHLYELVTVFESLNARVSGASTCVAPQTTAPILMRALNDIGPKKENSPLIVVAHMVPDIRLAPQDNLNHETVSSAIPQFVYRRVNPLYRHVLPDQEDGISVIADPPLTLPSTNRKVVVKWPEETRIDKPSHPLADQMRLRELNESPQ

Uniprot

H9ITG4   A0A2W1BLB0   A0A2H1WCF5   A0A2A4J1C7   A0A212ETE5   A0A194PTN8   + More
A0A194QWC5   A0A0L7KXF9   A0A2J7RGR1   E0V9S5   A0A1Q3FYC3   A0A1Q3FYH0   A0A151XIN1   B0WPB2   U5EFM0   Q0IF31   A0A182G9Z3   A0A182NIL7   A0A182REE8   A0A1S4G6W1   A0A195DZF8   A0A182WKP0   A0A195CR21   A0A182PV38   A0A182IV98   A0A182JWM6   A0A1B6LHY2   A0A182KPM3   A0A195BWH2   A0A158NEN9   A0A182TGS5   K7JNU8   A0A1Y1MT41   Q7Q696   A0A1W4WYK2   A0A195FLP8   A0A182VJP2   A0A182SHY8   A0A182YD08   A0A232EQE4   A0A2M4AN62   A0A2M4ANB1   A0A2M4BF37   A0A2M4BF43   A0A182FGZ5   A0A2A3EQH1   A0A087ZRJ9   A0A310SPG8   A0A1B6FHS4   A0A2M3Z350   A0A2M3ZGA4   A0A1B6IUD6   A0A2M4CLU4   E2AQ84   W5JLW1   A0A084WAB4   A0A182QSH9   A0A336LY93   A0A0J7KVJ2   A0A3L8D891   E2B3C8   U4UYH1   E9IDG0   A0A0C9RT97   A0A0L7RFF0   U4UQP9   A0A1B6E451   F4WRQ5   A0A0A9Z968   A0A154PPX3   A0A0A9ZD31   A0A146KNU7   A0A1J1J9Y7   A0A026WYX3   A0A2S2R176   J9JWX9   A0A2H8TSC1   A0A2S2NN89  

Pubmed

19121390    28756777    22118469    26354079    26227816    20566863    + More
17510324    26483478    20966253    21347285    20075255    28004739    12364791    25244985    28648823    20798317    20920257    23761445    24438588    30249741    23537049    21282665    21719571    25401762    26823975    24508170   

EMBL

BABH01007021    KZ150069    PZC74077.1    ODYU01007699    SOQ50717.1    NWSH01004053    + More
PCG65536.1    AGBW02012593    OWR44775.1    KQ459594    KPI96119.1    KQ461108    KPJ09265.1    JTDY01004809    KOB67726.1    NEVH01003757    PNF40024.1    DS234996    EEB10131.1    GFDL01002460    JAV32585.1    GFDL01002448    JAV32597.1    KQ982080    KYQ60264.1    DS232021    EDS32162.1    GANO01003786    JAB56085.1    CH477420    EAT41242.1    JXUM01050071    JXUM01050072    KQ561632    KXJ77946.1    KQ979999    KYN18285.1    KQ977381    KYN03151.1    GEBQ01016662    JAT23315.1    KQ976401    KYM92318.1    ADTU01013600    GEZM01028021    JAV86507.1    AAAB01008960    EAA11826.4    KQ981490    KYN41256.1    NNAY01002787    OXU20561.1    GGFK01008902    MBW42223.1    GGFK01008940    MBW42261.1    GGFJ01002524    MBW51665.1    GGFJ01002523    MBW51664.1    KZ288202    PBC33476.1    KQ760495    OAD60104.1    GECZ01031784    GECZ01020013    JAS37985.1    JAS49756.1    GGFM01002174    MBW22925.1    GGFM01006764    MBW27515.1    GECU01017159    JAS90547.1    GGFL01002128    MBW66306.1    GL441701    EFN64418.1    ADMH02000762    ETN65126.1    ATLV01022061    ATLV01022062    KE525327    KFB47158.1    AXCN02000417    UFQT01000305    SSX23046.1    LBMM01002659    KMQ94512.1    QOIP01000011    RLU16491.1    GL445323    EFN89806.1    KB632429    ERL95431.1    GL762454    EFZ21520.1    GBYB01011950    GBYB01011951    JAG81717.1    JAG81718.1    KQ414606    KOC69544.1    ERL95432.1    GEDC01013121    GEDC01004607    JAS24177.1    JAS32691.1    GL888292    EGI63062.1    GBHO01003168    JAG40436.1    KQ435026    KZC13955.1    GBHO01006543    GBHO01000467    GBRD01007409    JAG37061.1    JAG43137.1    JAG58412.1    GDHC01020448    GDHC01012989    JAP98180.1    JAQ05640.1    CVRI01000075    CRL08342.1    KK107078    EZA60344.1    GGMS01014532    MBY83735.1    ABLF02038004    ABLF02038007    ABLF02038011    GFXV01005319    MBW17124.1    GGMR01005783    MBY18402.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000235965    UP000009046    UP000075809    UP000002320    UP000008820    UP000069940    UP000249989    UP000075884    UP000075900    UP000078492    UP000075920    UP000078542    UP000075885    UP000075880    UP000075881    UP000075882    UP000078540    UP000005205    UP000075902    UP000002358    UP000007062    UP000192223    UP000078541    UP000075903    UP000075901    UP000076408    UP000215335    UP000069272    UP000242457    UP000005203    UP000000311    UP000000673    UP000030765    UP000075886    UP000036403    UP000279307    UP000008237    UP000030742    UP000053825    UP000007755    UP000076502    UP000183832    UP000053097    UP000007819   

PRIDE

H9ITG4   

Pfam

PF13855   LRR_8        + More
PF13306   LRR_5

Interpro

IPR003591   Leu-rich_rpt_typical-subtyp        + More
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
IPR026906   LRR_5       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9ITG4   A0A2W1BLB0   A0A2H1WCF5   A0A2A4J1C7   A0A212ETE5   A0A194PTN8   + More
A0A194QWC5   A0A0L7KXF9   A0A2J7RGR1   E0V9S5   A0A1Q3FYC3   A0A1Q3FYH0   A0A151XIN1   B0WPB2   U5EFM0   Q0IF31   A0A182G9Z3   A0A182NIL7   A0A182REE8   A0A1S4G6W1   A0A195DZF8   A0A182WKP0   A0A195CR21   A0A182PV38   A0A182IV98   A0A182JWM6   A0A1B6LHY2   A0A182KPM3   A0A195BWH2   A0A158NEN9   A0A182TGS5   K7JNU8   A0A1Y1MT41   Q7Q696   A0A1W4WYK2   A0A195FLP8   A0A182VJP2   A0A182SHY8   A0A182YD08   A0A232EQE4   A0A2M4AN62   A0A2M4ANB1   A0A2M4BF37   A0A2M4BF43   A0A182FGZ5   A0A2A3EQH1   A0A087ZRJ9   A0A310SPG8   A0A1B6FHS4   A0A2M3Z350   A0A2M3ZGA4   A0A1B6IUD6   A0A2M4CLU4   E2AQ84   W5JLW1   A0A084WAB4   A0A182QSH9   A0A336LY93   A0A0J7KVJ2   A0A3L8D891   E2B3C8   U4UYH1   E9IDG0   A0A0C9RT97   A0A0L7RFF0   U4UQP9   A0A1B6E451   F4WRQ5   A0A0A9Z968   A0A154PPX3   A0A0A9ZD31   A0A146KNU7   A0A1J1J9Y7   A0A026WYX3   A0A2S2R176   J9JWX9   A0A2H8TSC1   A0A2S2NN89  

PDB

4U06     E-value=2.4263e-18,     Score=228

KEGG

101738493    no KO assigned | (RefSeq) leucine-rich repeat protein SHOC-2

GO

GO:0016021   GO:0004721   GO:0005515   GO:0003824   GO:0006542   GO:0007186   GO:0006810   GO:0009072   GO:0007169  

Length:

617

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0142

Exp number, first 60 AAs:

0.00021

Total prob of N-in:

0.00069

outside

1  -  617

 

 

Pi

0.288162

Theta

3.228433

Tajima's D

-2.351718

CLR

18.733551

CSRT

0.000599970001499925

Interpretation

Uncertain