Gene

KWMTBOMO00292

Pre Gene Modal

BGIBMGA011396

Annotation

endonuclease-reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr1(+):9287308-9289851      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.111

CDS

ATGTTGATAGAGAAAAGGAAAAGACTAAAAGAACAAGGCATTGTAAACAATAGTCAAAGGGAGCGCTACAATCAATTGCATGCAGAGATTCAAAGGTCTACTCGGAGAGACAGAGATGAGCACATCAATAATATGTGTGAAGAAATTGAGGGACATGCTGATAAAGTGCAGACTAAGGACCTTTTCCTGAAAGTGAAGCAGCTAACGGGTGTCTTCAAGCCGAAGAAATGGATTATCGAAGATAGTAGAGGTAACACCTTGACAGAAATGGAACATGTTTTGGAGAGGTGGAGAAACTACTGTTATGACCTATATCGCGATGAAGATAATTTATGCACCGCCAAAATATGGGATGACCACCTGGAAGAGCCTCCTATACTACTTTCTGAGGTTGAATATGCAATACAAAAACTTAAGCATAAGGTGTTCATTGTCAAGCACAAAGAAAATTTAGATCTAAAATATTTCGATCTGGAGCACTCGCCTTCCAGTCACGAGTACCATAACTTGTCTTCGTTTTCCAAGACGCTGTACGAACAGAGCGGTTAA

Protein

MLIEKRKRLKEQGIVNNSQRERYNQLHAEIQRSTRRDRDEHINNMCEEIEGHADKVQTKDLFLKVKQLTGVFKPKKWIIEDSRGNTLTEMEHVLERWRNYCYDLYRDEDNLCTAKIWDDHLEEPPILLSEVEYAIQKLKHKVFIVKHKENLDLKYFDLEHSPSSHEYHNLSSFSKTLYEQSG

Uniprot

D5LB39   H9JCQ5   D7F163   A0A2W1BNH4   A0A0J7KGF7   A0A2W1BGD9   + More
D7F174   A0A2H1W4B8   A0A3D1L484   D7F172   D7F168   D7F167   D7F162   A0A0L7KZZ5   D7F175   A0A0J7L4A4   A0A2G8JL44   A0A0L7LF38   A0A0J7K8A5   A0A0B1PP52   A0A085NA39   W5P980   A0A023G4L3   A0A023GD30   A0A2H6KKM9   H3A4I6   A0A1S4EQZ4   A0A2J7PHB6   A0A2J7PL22   H3J6U9   A0A2J7PPK7   A0A2J7PQR6   H3A3N0   A0A2J7RS89   A0A2J7PNJ4   J9KN99   A0A2S2QXQ0   A0A2J7RE76   A0A2J7R7C2   A0A2J7RGX9   A0A2J7QFW5   A0A2J7Q4I0   A0A2J7Q6D5   A0A2J7QDX3   A0A2J7RJY3   A0A2J7PTB8   A0A2J7R2Y0   A0A2J7PT05   A0A2J7QRB7   A0A2T7NW75   A0A2J7PSI0   A0A2J7Q6T5   A0A2J7PSH5   A0A2J7QEY3  

Pubmed

20470440    19121390    28756777    30148503    26227816    29023486    + More
24929829    20809919    29078748    9215903   

EMBL

GU815090    ADF18553.1    BABH01034706    FJ265548    ADI61816.1    KZ150025    + More
PZC74827.1    LBMM01007694    KMQ89503.1    KZ150203    PZC72267.1    FJ265559    ADI61827.1    ODYU01006118    SOQ47682.1    DPCO01000033    HCE59365.1    FJ265557    ADI61825.1    FJ265553    ADI61821.1    FJ265552    ADI61820.1    FJ265547    ADI61815.1    JTDY01003909    KOB68843.1    FJ265560    ADI61828.1    LBMM01000801    KMQ97461.1    MRZV01001667    PIK36482.1    JTDY01001360    KOB74082.1    LBMM01011957    KMQ86519.1    KN538403    KHJ42451.1    KL367526    KFD66335.1    AMGL01013224    AMGL01013225    GBBM01006247    JAC29171.1    GBBM01003639    JAC31779.1    BDSA01000081    GBE63537.1    AFYH01196306    NEVH01025141    PNF15737.1    NEVH01024527    PNF17035.1    AAGJ04118689    AAGJ04161747    NEVH01022660    PNF18262.1    NEVH01022635    PNF18667.1    AFYH01136302    NEVH01000276    PNF43685.1    NEVH01023953    PNF17910.1    ABLF02040179    GGMS01012699    MBY81902.1    NEVH01005277    PNF39130.1    NEVH01006736    PNF36722.1    NEVH01003750    PNF40086.1    NEVH01014840    PNF27481.1    NEVH01018380    PNF23492.1    NEVH01017533    PNF24153.1    NEVH01015421    PNF26777.1    NEVH01002982    PNF41147.1    NEVH01021610    PNF19569.1    NEVH01007824    PNF35184.1    NEVH01021921    PNF19468.1    NEVH01011914    PNF31128.1    PZQS01000008    PVD25402.1    NEVH01021928    PNF19298.1    NEVH01017452    PNF24293.1    NEVH01021931    PNF19256.1    NEVH01015305    PNF27148.1   

Proteomes

UP000005204    UP000036403    UP000037510    UP000230750    UP000002356    UP000008672    + More
UP000079169    UP000235965    UP000007110    UP000007819    UP000245119   

PRIDE

D5LB39    H9JCQ5    D7F163    D7F174    D7F172    D7F168    + More
D7F167    D7F162    D7F175   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF00043   GST_C
PF03372   Exo_endo_phos

Interpro

IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
IPR027124   Swc5/CFDP2       
IPR002138   Pept_C14_p10       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR010987   Glutathione-S-Trfase_C-like       
IPR004046   GST_C       

SUPFAM

SSF56219   SSF56219        + More
SSF47616   SSF47616       

Gene 3D

3.60.10.10    

ProteinModelPortal

D5LB39   H9JCQ5   D7F163   A0A2W1BNH4   A0A0J7KGF7   A0A2W1BGD9   + More
D7F174   A0A2H1W4B8   A0A3D1L484   D7F172   D7F168   D7F167   D7F162   A0A0L7KZZ5   D7F175   A0A0J7L4A4   A0A2G8JL44   A0A0L7LF38   A0A0J7K8A5   A0A0B1PP52   A0A085NA39   W5P980   A0A023G4L3   A0A023GD30   A0A2H6KKM9   H3A4I6   A0A1S4EQZ4   A0A2J7PHB6   A0A2J7PL22   H3J6U9   A0A2J7PPK7   A0A2J7PQR6   H3A3N0   A0A2J7RS89   A0A2J7PNJ4   J9KN99   A0A2S2QXQ0   A0A2J7RE76   A0A2J7R7C2   A0A2J7RGX9   A0A2J7QFW5   A0A2J7Q4I0   A0A2J7Q6D5   A0A2J7QDX3   A0A2J7RJY3   A0A2J7PTB8   A0A2J7R2Y0   A0A2J7PT05   A0A2J7QRB7   A0A2T7NW75   A0A2J7PSI0   A0A2J7Q6T5   A0A2J7PSH5   A0A2J7QEY3  

KEGG

101743122    no KO assigned | (RefSeq) uncharacterized LOC101743122

GO

GO:0004519   GO:0003964   GO:0004197  

PANTHER

PTHR23227  

Length:

182

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.28396

outside

1  -  182

 

 

Pi

0.260318

Theta

1.477877

Tajima's D

-1.567355

CLR

2.769384

CSRT

0.0395480225988701

Interpretation

Uncertain