Gene

KWMTBOMO00287

Pre Gene Modal

BGIBMGA000677

Annotation

EF-hand_calcium-binding_domain-containing_protein_1_[Danaus_plexippus]

Location

Bomo_Chr1(+):9067433-9070147      View in EpiBrowser

Full name

EF-hand calcium-binding domain-containing protein 1      

Location in the cell

Cytoplasmic   Reliability : 1.212 Mitochondrial   Reliability : 1.432

CDS

ATGGTTATATTTTTCAAGATACAAAAGCGCGACGAAAAGCCGGCTGCATCCGATTTAATATCTAGGTCACATTTCAGAGATGTGCTTCATACTGGTTTAGGCATGACGGATTCATACATGATGGAACGTGTGATGGTAGCTCTCGACCGAGGCACGTCTCCTTACGTTACGATGGCAACTTTTGCAAAGGCTATATCATTGTATTTACGTGGTGATATTGAAGAACGTATCGCTTATGCGTTTACATGTTACGATCTTCTCGGCGAAGGTCACTTAAGAAGAGAAACGATGTATCAGCTCATGAAGAAGAGTCTTGCGAAAGCGTCTAGAGATGATGACGTCGAAGAGGCGGTCAAGGTAACACATTAA

Protein

MVIFFKIQKRDEKPAASDLISRSHFRDVLHTGLGMTDSYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKVTH

Keywords

Calcium   Metal-binding   Repeat   Alternative splicing   Complete proteome   Reference proteome  

Feature

chain  EF-hand calcium-binding domain-containing protein 1
splice variant  In isoform 4.

Uniprot

A0A212ETF1   A0A194QWB5   A0A2H1WVM8   A0A194PT34   H9ITU7   A0A139WAS3   + More
N6UGY0   N6UTK8   N6UI35   N6UCF5   U4UQV9   B0WHQ3   A0A3M7SAU9   A0A3M7SBK5   A0A1Q3FTF0   B0BLS4   Q28D49   Q179P5   H2YBN1   Q1DGU0   A0A182G5F3   G1N9C7   A0A182GN68   A0A3P9AHJ3   A0A091WB07   V9LF41   A0A2I0U4I3   A0A1S4G4H1   F6SUI5   W5MXJ9   A0A094KQN5   F1NVA6   U3INQ7   K7FT32   A0A1S3EK40   A0A0P7UAC5   A0A060XZ87   B5X9M8   A0A3B4BMI9   A0A369RWF1   Q3KQ77   A0A1L8FRL3   A0A2Y9R480   A0A0B8RYZ5   A0A0Q3PDR4   A0A210Q9J6   A0A1W4YG48   A0A093HEB5   A0A3B3R6Q9   H3APC9   A0A1W4Y6R8   Q8T893   A0A182MK82   A0A1X7VML3   F7G2S2   G3TAK5   G3TUU9   A0A099YZE7   A0A1U7U8U9   M0RCD9   A0A1A6G0K2   V8P2T5   G3W1M9   A0A0P6JAQ7   Q1LWZ0   G3W1M8   A0A3M0JVF3   A0A1B6J062   A0A1S3ACW9   A0A2G9RZC0   A0A151MQ46   A0A383Z1B7   G1SLY9   G5BHT0   K1QX74   A0A091I0Z1   Q9D3N2-3   A0A182Y577   F6TWL3   A0A2K5ZNS5   A0A3Q0FHZ7   Q9D3N2-2   E3TFK8   Q9D3N2   A0A2U3VLQ9   A4UUI7   G1KR06   E4YV88   A0A2I0MR90   A0A2K5PIZ9   A0A2K6UFM0   A0A1V4KBU7   M7BI20   A0A2Y9LUU7   A0A097ZIF8   A0A3B1J7I9   G1RSL4   A0A1U8C8X3  

Pubmed

22118469    26354079    19121390    18362917    19820115    23537049    + More
30375419    20431018    17510324    26483478    20838655    25069045    24402279    17495919    15592404    17381049    24755649    20433749    30042472    27762356    25476704    28812685    29240929    9215903    12481130    15114417    18620543    29386625    18464734    15057822    15632090    24297900    21709235    23594743    22293439    21993624    21993625    22992520    16141072    15489334    25244985    25243066    20634964    21097902    23371554    23624526    25329095   

EMBL

AGBW02012593    OWR44768.1    KQ461108    KPJ09255.1    ODYU01011399    SOQ57120.1    + More
KQ459594    KPI96128.1    BABH01007000    KQ971380    KYB25036.1    APGK01020901    KB740259    ENN80980.1    APGK01016539    KB739889    ENN82082.1    APGK01034756    APGK01034757    KB740918    ENN78317.1    ENN78316.1    KB632400    ERL94883.1    DS231939    EDS27920.1    REGN01001731    RNA32891.1    RNA32890.1    GFDL01004313    JAV30732.1    BC158143    AAI58144.1    AAMC01074018    CR855706    CAJ83954.1    CH477347    EAT42979.1    CH900410    EAT32370.1    JXUM01043534    KQ561366    KXJ78833.1    JXUM01075651    KQ562898    KXJ74876.1    KK735016    KFR11953.1    JW878853    AFP11370.1    KZ506182    PKU40976.1    AHAT01004643    KL263857    KFZ60950.1    AADN05000033    AGCU01028882    AGCU01028883    AGCU01028884    JARO02006955    KPP64549.1    FR906640    CDQ85013.1    BT047747    ACI67548.1    NOWV01000170    RDD38572.1    BC106351    CM004477    OCT74213.1    GBSH01000947    JAG68078.1    LMAW01003048    KQK74412.1    NEDP02004513    OWF45413.1    KL206301    KFV80943.1    AFYH01132934    AFYH01132935    AFYH01132936    AFYH01132937    EAAA01000627    AB079059    BAB85848.1    AXCM01011912    KL886927    KGL74273.1    AABR07034811    CH473999    EDL77833.1    LZPO01110126    OBS58932.1    AZIM01000986    ETE68585.1    AEFK01057415    GEBF01002842    JAO00791.1    BX510986    BC171473    BC171475    AAI71473.1    QRBI01000123    RMC04986.1    GECU01015226    JAS92480.1    KV928254    PIO33268.1    AKHW03005461    KYO26658.1    AAGW02047479    AAGW02047480    JH170396    EHB08841.1    JH816193    EKC38288.1    KL218015    KFP01098.1    AK015426    AK015866    AK017267    AK030381    AK038735    AK042748    AK043519    AK077722    BC085167    GAMS01008892    GAMS01008891    JAB14244.1    GU589142    ADO29094.1    EF494668    ABP06309.1    FN655513    CBY39373.1    AKCR02000004    PKK32202.1    LSYS01003958    OPJ81821.1    KB528801    EMP35285.1    AB986239    BAP74425.1    ADFV01107474    ADFV01107475   

Proteomes

UP000007151    UP000053240    UP000053268    UP000005204    UP000007266    UP000019118    + More
UP000030742    UP000002320    UP000276133    UP000008143    UP000008820    UP000007875    UP000069940    UP000249989    UP000001645    UP000265140    UP000053605    UP000002280    UP000018468    UP000000539    UP000007267    UP000081671    UP000034805    UP000193380    UP000087266    UP000261440    UP000253843    UP000186698    UP000248480    UP000051836    UP000242188    UP000192224    UP000053584    UP000261540    UP000008672    UP000008144    UP000075883    UP000007879    UP000002279    UP000007646    UP000053641    UP000189704    UP000002494    UP000092124    UP000007648    UP000000437    UP000269221    UP000079721    UP000050525    UP000261681    UP000001811    UP000006813    UP000005408    UP000054308    UP000000589    UP000076408    UP000008225    UP000233140    UP000189705    UP000221080    UP000245340    UP000001646    UP000053872    UP000233040    UP000233220    UP000190648    UP000031443    UP000248483    UP000018467    UP000001073    UP000189706   

PRIDE

H9ITU7    M0RCD9    Q9D3N2   

Pfam

PF13499   EF-hand_7        + More
PF13202   EF-hand_5
PF13833   EF-hand_8
PF00036   EF-hand_1
PF00069   Pkinase

Interpro

IPR028846   Recoverin        + More
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR018247   EF_Hand_1_Ca_BS       
IPR035914   Sperma_CUB_dom_sf       
IPR000719   Prot_kinase_dom       
IPR011009   Kinase-like_dom_sf       

SUPFAM

SSF47473   SSF47473        + More
SSF49854   SSF49854       
SSF56112   SSF56112       

Gene 3D

2.60.120.290    

CDD

cd00051  EFh

ProteinModelPortal

A0A212ETF1   A0A194QWB5   A0A2H1WVM8   A0A194PT34   H9ITU7   A0A139WAS3   + More
N6UGY0   N6UTK8   N6UI35   N6UCF5   U4UQV9   B0WHQ3   A0A3M7SAU9   A0A3M7SBK5   A0A1Q3FTF0   B0BLS4   Q28D49   Q179P5   H2YBN1   Q1DGU0   A0A182G5F3   G1N9C7   A0A182GN68   A0A3P9AHJ3   A0A091WB07   V9LF41   A0A2I0U4I3   A0A1S4G4H1   F6SUI5   W5MXJ9   A0A094KQN5   F1NVA6   U3INQ7   K7FT32   A0A1S3EK40   A0A0P7UAC5   A0A060XZ87   B5X9M8   A0A3B4BMI9   A0A369RWF1   Q3KQ77   A0A1L8FRL3   A0A2Y9R480   A0A0B8RYZ5   A0A0Q3PDR4   A0A210Q9J6   A0A1W4YG48   A0A093HEB5   A0A3B3R6Q9   H3APC9   A0A1W4Y6R8   Q8T893   A0A182MK82   A0A1X7VML3   F7G2S2   G3TAK5   G3TUU9   A0A099YZE7   A0A1U7U8U9   M0RCD9   A0A1A6G0K2   V8P2T5   G3W1M9   A0A0P6JAQ7   Q1LWZ0   G3W1M8   A0A3M0JVF3   A0A1B6J062   A0A1S3ACW9   A0A2G9RZC0   A0A151MQ46   A0A383Z1B7   G1SLY9   G5BHT0   K1QX74   A0A091I0Z1   Q9D3N2-3   A0A182Y577   F6TWL3   A0A2K5ZNS5   A0A3Q0FHZ7   Q9D3N2-2   E3TFK8   Q9D3N2   A0A2U3VLQ9   A4UUI7   G1KR06   E4YV88   A0A2I0MR90   A0A2K5PIZ9   A0A2K6UFM0   A0A1V4KBU7   M7BI20   A0A2Y9LUU7   A0A097ZIF8   A0A3B1J7I9   G1RSL4   A0A1U8C8X3  

PDB

5YPX     E-value=4.07731e-18,     Score=217

KEGG

101738006    no KO assigned | (RefSeq) EF-hand calcium-binding domain-containing protein 1-like

GO

GO:0005509   GO:0016021   GO:0097729   GO:0120152   GO:0005930   GO:2000578   GO:0060326   GO:0045504   GO:0048487   GO:1901317   GO:0004672   GO:0005524  

PANTHER

PTHR23055  

Length:

122

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18369

Exp number, first 60 AAs:

0.10095

Total prob of N-in:

0.28496

outside

1  -  122

 

 

Pi

3.371162

Theta

13.14737

Tajima's D

-2.165836

CLR

0.813152

CSRT

0.00624968751562422

Interpretation

Uncertain