Gene

KWMTBOMO00282

Pre Gene Modal

BGIBMGA000674

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr1(+):8950823-8953897      View in EpiBrowser

Full name

Sodium channel protein Nach      

Location in the cell

PlasmaMembrane   Reliability : 2.785

CDS

ATGGTGAATCCCTCTAGTGAGGTGTTCATAGCGTTGTCGCCAGAACGCACCTATTCAACCCCGGGCGTCAAAGGGTTCCCCCCTGAACAACGTCAGTGCTACTTCAAGGATGAGGTTAAAATTGCGAACTTTCGTCAGTATTCATTTCATAACTGCATTGTGTACCGTAAGCTTAAGAGCATCAAAGATGCCTGCAATTGCGCACCATTTTTTTTATCGAAAGATTATTACAGGACTTGCAACTTTTACGATTTAGATTGTCTGGAGACTGTTTTATGGCCGAAAAGCATTAAAAATCATAATACCACGTTAGTTGACGATCTACACTGCTTACCAGAATGTGAACACTTCGATTACCCATTGGAAGTTGCTCTCGGTAAACTTGCTTCAAATATGCATTTGAATCGTCTGCCTTTTTTTAATGAAGTTGATTTAGTGAATCAATCTGTATTGAATGTATTCTTCAACGACTTGGTATCGACCAGATATAGACGTGATGTATATTTAAATTGGCAAAATATCTTAGCTGCGTTCGGTGGCCTCCTTAGCCTGATGCTTGGCTTCACTTTGATATCTGGGTTTGATTTAGTTATATTTCTTGTACTACATGTCTTCTACGGGCTTATTCAGATAATTTTCGTATATAAAAATAAATATGTGCAAAAAATTAACGTTCAAGAGCGTAATTCCCACAAGGAAGCTTGGATAATGCCAAGACCGACGGATGCCATCGACAGGAAGACACGCAATGATCCGCTTTACTCAAACATACATTACTATTAA

Protein

MVNPSSEVFIALSPERTYSTPGVKGFPPEQRQCYFKDEVKIANFRQYSFHNCIVYRKLKSIKDACNCAPFFLSKDYYRTCNFYDLDCLETVLWPKSIKNHNTTLVDDLHCLPECEHFDYPLEVALGKLASNMHLNRLPFFNEVDLVNQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQIIFVYKNKYVQKINVQERNSHKEAWIMPRPTDAIDRKTRNDPLYSNIHYY

Description

Part of a complex that plays a role in tracheal liquid clearance. Probable role in sodium transport (By similarity).

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Keywords

Glycoprotein   Ion channel   Ion transport   Membrane   Sodium   Sodium channel   Sodium transport   Transmembrane   Transmembrane helix   Transport  

Feature

chain  Sodium channel protein Nach

Uniprot

H9ITU4   A0A2A4JSD9   A0A212ETD6   A0A1J1IMJ5   A0A1S4FRL4   A0A1B0DRI0   + More
A0A182QKV6   A0A154NXS5   A0A336MDQ3   A0A1B0CID6   A0A232FHX8   A0A182F242   A0A151IM98   A0A182NUY0   A0A182JVY5   B0WX52   A0A139WHB4   A0A182U6B3   A0A182INY8   A0A182PB08   A0A182UZ03   A0A182L5Y7   A0A182WHJ6   A0A182XCI7   A0A1B0D5E9   W5J8U6   Q7Q1X3   A0A182MHC4   A0A1W4W9F9   A0A1I8MHF0   A0A1B0CK88   B5DJ54   B4G7X4   A0A151WVD6   B4N1A0   B4Q877   B4HWA5   Q16RZ7   Q86LG7   A0A182RRH4   B3N8I2   B4NYM0   A0A084VBY6   B3MUZ3   A0A3B0KBW7   A0A0L0CNA8   A0A067RHK4   A0A2J7QTA7   A0A310SSM8   A0A2J7Q831   A0A088A2G6   E2B395   A0A336KF41   A0A336M002   A0A2J7PVC7   A0A336MDV5   A0A2J7REJ0   B4KIC4   B4JZI0   A0A2P8ZNM2   A0A310SJY6   A0A1A9Z9F9   A0A195FVY2   K7INU5   A0A232F9M1   A0A1B0AWZ8   A0A151WHI7   A0A182Y5M0   F4WNG9   A0A1A9UYA5   A0A1I8PF91   A0A310S8T3   A0A026VZU9   A0A067QUS0   A0A182IDW7   E2BM03   A0A1B6HI54   A0A0M3QTL3   A0A067QZ13   A0A0N0U3N5   F4WNX0   A0A0J7KTG4   E2BV58   A0A088AUE3   A0A0L7RDT9   A0A034WTB9   A0A154PGC8   F4WNX1   O61370   A0A151WPC1   A0A2A3EN15   B3MDJ9   A0A0P9AG67   A0A0T6BIH2   A0A195EWN8   A0A336LWG6   A0A158NBF0  

Pubmed

19121390    22118469    28648823    18362917    19820115    20966253    + More
20920257    23761445    12364791    25315136    15632085    17994087    22936249    17510324    10731132    12537568    12537572    12537573    12537574    12571352    16110336    17569856    17569867    26109357    26109356    17550304    24438588    26108605    24845553    20798317    29403074    20075255    25244985    21719571    24508170    25348373    21347285   

EMBL

BABH01006984    NWSH01000732    PCG74524.1    AGBW02012593    OWR44765.1    CVRI01000052    + More
CRK99689.1    AJVK01032874    AJVK01032875    AXCN02000752    KQ434772    KZC03894.1    UFQS01001009    UFQT01001009    SSX08548.1    SSX28464.1    AJWK01013196    NNAY01000198    OXU30069.1    KQ977063    KYN06007.1    DS232158    EDS36313.1    KQ971343    KYB27274.1    AJVK01011749    ADMH02001945    ETN60381.1    AAAB01008980    EAA14549.4    AXCM01000826    AJWK01015896    AJWK01015897    CH379060    EDY69923.1    CH479180    EDW28472.1    KQ982706    KYQ51843.1    CH963920    EDW78093.1    CM000361    CM002910    EDX04399.1    KMY89330.1    CH480818    EDW52300.1    CH477692    EAT37212.1    AY226546    AE014134    AAO47372.1    ABC65884.1    CH954177    EDV58405.1    CM000157    EDW88684.1    ATLV01009870    KE524552    KFB35480.1    CH902624    EDV33058.1    OUUW01000010    SPP85660.1    JRES01000147    KNC33805.1    KK852504    KDR22518.1    NEVH01011198    PNF31805.1    KQ759843    OAD62610.1    NEVH01016978    PNF24738.1    GL445323    EFN89773.1    UFQS01000390    UFQT01000390    SSX03496.1    SSX23861.1    UFQT01000343    SSX23390.1    NEVH01020964    PNF20288.1    SSX08549.1    SSX28465.1    NEVH01004961    PNF39252.1    CH933807    EDW13421.2    CH916379    EDV94102.1    PYGN01000009    PSN58104.1    KQ763832    OAD54712.1    KQ981215    KYN44603.1    NNAY01000660    OXU27138.1    JXJN01004965    KQ983115    KYQ47278.1    GL888237    EGI64162.1    OAD54711.1    KK107525    EZA49292.1    KK853243    KDR09460.1    APCN01004535    GL449100    EFN83252.1    GECU01033329    JAS74377.1    CP012523    ALC39113.1    KK853179    KDR10223.1    KQ435881    KOX69844.1    GL888239    EGI64128.1    LBMM01003440    KMQ93534.1    GL450824    EFN80350.1    KQ414612    KOC69152.1    GAKP01001063    JAC57889.1    KQ434899    KZC10892.1    EGI64129.1    AF024691    KQ982876    KYQ49716.1    KZ288205    PBC33128.1    CH902619    EDV37462.1    KPU76839.1    LJIG01000245    KRT86695.1    KQ981953    KYN32299.1    UFQT01000234    SSX22160.1    ADTU01000293   

Proteomes

UP000005204    UP000218220    UP000007151    UP000183832    UP000092462    UP000075886    + More
UP000076502    UP000092461    UP000215335    UP000069272    UP000078542    UP000075884    UP000075881    UP000002320    UP000007266    UP000075902    UP000075880    UP000075885    UP000075903    UP000075882    UP000075920    UP000076407    UP000000673    UP000007062    UP000075883    UP000192221    UP000095301    UP000001819    UP000008744    UP000075809    UP000007798    UP000000304    UP000001292    UP000008820    UP000000803    UP000075900    UP000008711    UP000002282    UP000030765    UP000007801    UP000268350    UP000037069    UP000027135    UP000235965    UP000005203    UP000008237    UP000009192    UP000001070    UP000245037    UP000092445    UP000078541    UP000002358    UP000092460    UP000076408    UP000007755    UP000078200    UP000095300    UP000053097    UP000075840    UP000092553    UP000053105    UP000036403    UP000053825    UP000242457    UP000005205   

PRIDE

H9ITU4    Q86LG7    O61370   

Pfam

PF00858   ASC

Interpro

IPR001873   ENaC        + More
IPR020903   ENaC_CS       

ProteinModelPortal

H9ITU4   A0A2A4JSD9   A0A212ETD6   A0A1J1IMJ5   A0A1S4FRL4   A0A1B0DRI0   + More
A0A182QKV6   A0A154NXS5   A0A336MDQ3   A0A1B0CID6   A0A232FHX8   A0A182F242   A0A151IM98   A0A182NUY0   A0A182JVY5   B0WX52   A0A139WHB4   A0A182U6B3   A0A182INY8   A0A182PB08   A0A182UZ03   A0A182L5Y7   A0A182WHJ6   A0A182XCI7   A0A1B0D5E9   W5J8U6   Q7Q1X3   A0A182MHC4   A0A1W4W9F9   A0A1I8MHF0   A0A1B0CK88   B5DJ54   B4G7X4   A0A151WVD6   B4N1A0   B4Q877   B4HWA5   Q16RZ7   Q86LG7   A0A182RRH4   B3N8I2   B4NYM0   A0A084VBY6   B3MUZ3   A0A3B0KBW7   A0A0L0CNA8   A0A067RHK4   A0A2J7QTA7   A0A310SSM8   A0A2J7Q831   A0A088A2G6   E2B395   A0A336KF41   A0A336M002   A0A2J7PVC7   A0A336MDV5   A0A2J7REJ0   B4KIC4   B4JZI0   A0A2P8ZNM2   A0A310SJY6   A0A1A9Z9F9   A0A195FVY2   K7INU5   A0A232F9M1   A0A1B0AWZ8   A0A151WHI7   A0A182Y5M0   F4WNG9   A0A1A9UYA5   A0A1I8PF91   A0A310S8T3   A0A026VZU9   A0A067QUS0   A0A182IDW7   E2BM03   A0A1B6HI54   A0A0M3QTL3   A0A067QZ13   A0A0N0U3N5   F4WNX0   A0A0J7KTG4   E2BV58   A0A088AUE3   A0A0L7RDT9   A0A034WTB9   A0A154PGC8   F4WNX1   O61370   A0A151WPC1   A0A2A3EN15   B3MDJ9   A0A0P9AG67   A0A0T6BIH2   A0A195EWN8   A0A336LWG6   A0A158NBF0  

KEGG

105842165    K03440 acid-sensing ion channel, other | (RefSeq) sodium channel protein Nach-like

GO

GO:0016021   GO:0005272   GO:0060025   GO:0006814   GO:0035002   GO:0016020   GO:0006101   GO:0005506   GO:0009072   GO:0006810   GO:0007169  

PANTHER

PTHR11690  

Subcellular location

Membrane  

Length:

260

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

42.05976

Exp number, first 60 AAs:

0.00074

Total prob of N-in:

0.97782

inside

1  -  168

TMhelix

169  -  191

outside

192  -  195

TMhelix

196  -  215

inside

216  -  260

 

 

Pi

12.599747

Theta

12.418373

Tajima's D

-0.675533

CLR

0.128651

CSRT

0.20073996300185

Interpretation

Uncertain