SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00278  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000549
Annotation
Putative_serine_protease_K12H4.7_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.079
 

Sequence

CDS
ATGAAGCTCTACACTATTTTATTTAATTTATATGTAGCGCTAATTAGTGTTGATGGTGTAAAAAAATTTCATTTGGGCCGTAGTAATGGTGGTAATTTAGGAATACCTGGTGGTGATTATCAATCAAATTTGCCACCTCCACAGTGGTTTAAGCAAAAGTTAGACCACTCAAATCCATCCGATCTTCGAACTTGGAAACAGCGCTATTATGTAAATGACAGTTTTTATGATTTCAAAAATCAAGGCCCAGTATTTTTGATGATTGGTGGTGAGGGTCCAGCTGATGCAAGATGGATGGTGACAGGAACTTGGATTAATTATGCAAAGAAGTTCAATGCACTTTGTATAAATTTAGAACATCGTTTTTATGGAGAGAGTCATCCCACTTTGGATCTTAGTATTAAGAACTTACAGTTTCTATCATCATACCAAGCACTTGCTGATCTGGCCAATTTTATCAGTTCAATGAAACAGAAGTTCAGATTAAATGAAAAGGTGAAATGGATTGCCTTTGGAGGATCCTATCCAGGTTCCTTGGCTGCTTGGCTAAGATTAAAATATCCTCATCTTATACATGCATCTATTTCTACAAGTGGACCACTATTGGCTAAAGTTGATTTTAAGGAATATTATCAAGTAGTTGTTGATGCATTAAGAGAAAAGACTGGTGATGATAAATGTGTCAATGAACTTAGGCAAGCGCATAATGAAATAAGTCAATTAATACAACACAGTCCAGAAGTAATTGAAAAGGAATTTAGGGTTTGTAAGCCATTTGGCTTGGCATCCCAAAATGATATGAAAAATTTCTACAATTCAATAGCTGATGATTTTGCTGATTTGGTGCAATACAATGAAGATAACAGGATAAGTGCAGATGTTAATTATAAGAATCTCACAATCAATACAGTTTGCGACATGCTAACAGCAACTGGAGGCTTACCTGCTTACAAGAAACTAGCTGCGTTCAATGATATTGTTCTAGCTAAATCTAACGAAACTTGTATGGATTATAGCTACGATAATATGATCTCAGATCTCAGGAATATAACATGGAGCTCTAATGGAGCTCGGCAATGGATGTATCAAACGTGTACAGAATTCGGATTCTATCAAACGTCATCTGCCGAAATGGATGTCTTTGGAAATAATTTCGATGTCGATTTCTTCATCCAGCAATGTCAAGATGTGTTTGGACAAAAGTACAATCTCAATTTCGTTTCGAACTCCGCTGCATGGACTAACAATTACTATGGTGCTCTAAAAATAGCTGTGGGTCGGATAGTGTTCGTACACGGTTCCATAGATCCGTGGCACGCTCTGGGTATAACCGAGACGAAGGATAACGATTCCCCTGCTATTTTCATACACGGAACCGCACACTGTGCCAATATGTATCCAGCCAGCGATAATGATTTAGCTGAACTGAAACAAGCAAGAATCGAAATTGAAAAATATCTATCCAAATGGCTTGATTGA
Protein
MKLYTILFNLYVALISVDGVKKFHLGRSNGGNLGIPGGDYQSNLPPPQWFKQKLDHSNPSDLRTWKQRYYVNDSFYDFKNQGPVFLMIGGEGPADARWMVTGTWINYAKKFNALCINLEHRFYGESHPTLDLSIKNLQFLSSYQALADLANFISSMKQKFRLNEKVKWIAFGGSYPGSLAAWLRLKYPHLIHASISTSGPLLAKVDFKEYYQVVVDALREKTGDDKCVNELRQAHNEISQLIQHSPEVIEKEFRVCKPFGLASQNDMKNFYNSIADDFADLVQYNEDNRISADVNYKNLTINTVCDMLTATGGLPAYKKLAAFNDIVLAKSNETCMDYSYDNMISDLRNITWSSNGARQWMYQTCTEFGFYQTSSAEMDVFGNNFDVDFFIQQCQDVFGQKYNLNFVSNSAAWTNNYYGALKIAVGRIVFVHGSIDPWHALGITETKDNDSPAIFIHGTAHCANMYPASDNDLAELKQARIEIEKYLSKWLD

Summary

EMBL
BABH01006977    BABH01006978    ODYU01003579    SOQ42517.1    KQ459594    KPI96131.1    + More
KQ461108    KPJ09251.1    AGBW02012593    OWR44761.1    NWSH01000884    PCG73717.1    GEZM01025029    JAV87638.1    KQ971321    EFA00580.2    GL768066    EFZ12594.1    KQ982182    KYQ59185.1    ADTU01014274    KQ979440    KYN21502.1    KQ981410    KYN41918.1    GL888365    EGI62155.1    AK417138    BAN20353.1    KQ977279    KYN03978.1    LJIG01022644    KRT79472.1    GFTR01006675    JAW09751.1    KZ288400    PBC26304.1    GECU01005922    JAT01785.1    GBYB01000596    JAG70363.1    ABLF02028806    ABLF02028809    ACPB03000772    GAHY01001967    JAA75543.1    MRZV01001613    PIK36813.1    UFQT01001440    SSX30592.1    KY031188    ATU82939.1    QOIP01000012    RLU16239.1    KU932243    APA33879.1    GFXV01006003    MBW17808.1    KQ762408    OAD55889.1    CH940647    EDW69202.1    KK107199    EZA55516.1    KK108267    EZA46799.1    GECZ01001513    JAS68256.1    GEBQ01001166    JAT38811.1    FX985297    BAX07310.1    CVRI01000067    CRL06754.1    UFQS01000109    UFQT01000109    SSW99774.1    SSX20154.1    GANO01003087    JAB56784.1    NNAY01001721    OXU23126.1    QOIP01000013    RLU15564.1    KK107796    EZA47726.1    KQ414665    KOC65159.1    NEVH01013592    PNF28388.1    CH933809    EDW17959.1    KK852542    KDR21723.1    GEDC01026876    JAS10422.1    ABLF02021908    ABLF02021912    CH902618    EDV41167.1    CP012525    ALC43759.1    GDHC01017256    JAQ01373.1    DS235832    EEB18067.1    CH379068    EAL31237.1    CH479246    EDW37775.1    GBXI01016903    JAC97388.1    DS231966    EDS29541.1    CH963847    EDW72793.1    GG666610    EEN49641.1    GECU01025044    JAS82662.1    KB632273    ERL91071.1    AE014296    AAF50628.1    GL451975    EFN78126.1    CM002912    KMY97979.1    CH480817    EDW50772.1    CM000363    EDX09497.1    GDHF01021092    GDHF01011848    JAI31222.1    JAI40466.1    GAKP01007297    GAKP01007296    JAC51655.1    CH916366    EDV96155.1    AY070659    AAL48130.1    CM000159    EDW93687.1    GL732525    EFX88622.1    KA646544    AFP61173.1    GAMC01009592    JAB96963.1    CH954178    EDV50545.1    JXUM01120459    KQ566394    KXJ70163.1    AXCM01000891    GAPW01001040    JAC12558.1    JRES01000122    KNC34009.1    GDRN01103633    JAI58048.1    OUUW01000012    SPP87512.1    GL437123    EFN71004.1    ATLV01019633    KE525275    KFB44463.1    ADMH02001182    ETN63801.1    AAAB01008960    EAA11647.3    CH477548    EAT39136.1   
Pfam
PF05577   Peptidase_S28        + More
PF13564   DoxX_2
Interpro
IPR029058   AB_hydrolase        + More
IPR042269   Ser_carbopepase_S28_SKS       
IPR008758   Peptidase_S28       
IPR032808   DoxX       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
3N0T     E-value=8.45149e-34,     Score=360

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.952699
 
 
Length:
492
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.24704
Exp number, first 60 AAs:
0.12973
Total prob of N-in:
0.01323
outside
1  -  492
 
 

Population Genetic Test Statistics

Pi
21.712913
Theta
20.536693
Tajima's D
-1.200649
CLR
0.126742
CSRT
0.101694915254237
Interpretation
Uncertain
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