Gene

KWMTBOMO00275

Pre Gene Modal

BGIBMGA000669

Annotation

PREDICTED:_uncharacterized_protein_LOC106126268_[Papilio_xuthus]

Location

Bomo_Chr1(+):8813693-8820845      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.745

CDS

ATGGAGTCACCACCGTTCTCGACACAGTCCGAAGCGCCTCCTTTAAGTGAAGACAGTGGATTACTGATTACAAGTGGTTCGTTTTCGAGCGACTCAGCTAGCGGATGGCATTACGTTGCTTCTGAGCTGCAAGAAAGTGACTTTGATGAAAAATCTCTGTCACTTTGTGAATCCACAGAAACATCAGAACGTATGTGTGACTTTTTTAACACTGTTAAAAAAGGTCCTGGCAAAGTAATTCTTACAACAATAGAACCACCTCCAGAGTTTCAGGATAATCCTGAAGAGAATGCTGAAGCAAAAACATGCACCACTGTCAATATACTGTCTCAACCTGCTGCATCCATTGAAAATTCCTCGAAGAATTTAAAAACTCAAAATTTAGATGTAGCTGCTAATATAAAACATGTTTCACCAATTTGCTCTAAAAAATCAAAGCCAGAAATGATGTATGAGCATCGTCAGTGCTTAAATCACAGATTTTCCAGTCCTAGGTTACTGCATCTTAGTCCATGCCGAGGAACTCGCCCTTCATCTAGAAGCTCAGTTTCCTCGCGTTTATCGAGTAGTCATAACTCACTTGTAACTCAGTTTCAAATTGACGACTCTAACTTCATAACACAAGCAATATCACATGATACACTTTCCACTGCAACTACAGATATAACAGACATGTACAATGTCCCTTTTGATAGTGATATTTACGCAGTGCCAATCGATATGATTCGTCCAGGTCAGTCAAATATAAAACATAAAAGCAAGAAAACAAACAGAAGCAATAAGAGACGAGTCAGAGTGATATCACAAAATACAAGCATCCCTCATGCTTCTATTGAAAAACATCACAAAGCAAAGGAATCCGTTAGACACAAAGAAATCAAAATTAAAAGACACAGTTTGCCCAGCTCTTCTTACAAACGAAACATTGTGGAGTCAGACACAGACTCCCTCCAACTAACTCTGCGTGAAATGAGAAAATATTTACACACACTTTATTCTAGTTCCAGTGATTCAGAATGTAGGAACACTGTAAGCAGGAAAAATAATACAGTTATAACCAGTGTTGGAGTACATGCAAAGCATGTAAACAAAGATGCAAACTCTAACATGTTTCACAAAGACAGCAATGAAATATCCAAATCTAATGATCCCTACAATCAGAGGAAATCAACTAAAAATTCTTGTGGGACTAACATGAAAAGTAAAAAGCAAAAAGATAATTTAGCAAAAGATATTGAAGTTGACAAAACTGAAAAACCAACTAAGAAAAATGCATCAAATCCAACTCAGAAACCGAAAATGTCGACAGTCAGAATCCTTTCAATTAATTTAAAACAGAGTTTCTGTAATTTATTTCGCTGGCGAAGGCAACCAGTCGTTGATAATGTGACTGAAGTAGAAAGACTTGGAAAACAAGGAAAAATTGATGAATCACCTCCAGCAGCTGTCCGTCGAGCACTGCCTCCACTGCCTCAAACACCACACACCTCCCATGCTTCTCGTAGAGCGACTAATGATGAAGAAACAATTATGGATTTTGCTAAATCCATTCAAAAAGTGAAAGATTATGGCTGGTATTGGGGTCCTCTTTCTGTAGAAGCTGCTGAGAAAATACTGTCTAATGAACCTGATGGTTCATTCATAGTACGTGATAGTAGTGATGATCACTATATTTTTACTTTGACATTCAAATTAAATGGACTTAGGCACGTAAGAATTGAACATGATCAGGGTAATTTTTGCTTCGGTGGTTGTACAATGTTTAAAGCACAAACGATAGTCGAATTTATTGAAAATGCTGTGGAAACATCTCGCAGTGGCCGCTATTTATTCTTCCTAAACTTGAGACCAGTTCTTGGCCCAGTTCGTGTGCAACTTCTTTACCCAGTGTCAAGATTCAAGCGAGTACAAAGCCTACAACATATGTGTAGGTTTGTGATATTGAAGTACGTACGCCGTGATCTTATTAGCAGCCTTCCACTGCCAAGGCGCCTCGTCGATTATTTGAGCGCCACTCATTATTACTCTGAGCTTCTGGCCGACATTTAA

Protein

MESPPFSTQSEAPPLSEDSGLLITSGSFSSDSASGWHYVASELQESDFDEKSLSLCESTETSERMCDFFNTVKKGPGKVILTTIEPPPEFQDNPEENAEAKTCTTVNILSQPAASIENSSKNLKTQNLDVAANIKHVSPICSKKSKPEMMYEHRQCLNHRFSSPRLLHLSPCRGTRPSSRSSVSSRLSSSHNSLVTQFQIDDSNFITQAISHDTLSTATTDITDMYNVPFDSDIYAVPIDMIRPGQSNIKHKSKKTNRSNKRRVRVISQNTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTVRILSINLKQSFCNLFRWRRQPVVDNVTEVERLGKQGKIDESPPAAVRRALPPLPQTPHTSHASRRATNDEETIMDFAKSIQKVKDYGWYWGPLSVEAAEKILSNEPDGSFIVRDSSDDHYIFTLTFKLNGLRHVRIEHDQGNFCFGGCTMFKAQTIVEFIENAVETSRSGRYLFFLNLRPVLGPVRVQLLYPVSRFKRVQSLQHMCRFVILKYVRRDLISSLPLPRRLVDYLSATHYYSELLADI

Uniprot

H9ITT9   A0A2H1VQY0   A0A2A4JQN1   A0A194QVA3   A0A0L7LV02   A0A194PTQ2   + More
A0A212EZ88   A0A139WL22   A0A2J7QCW1   A0A1E1VZH6   A0A1B6C6H0   A0A1Y1NDU2   A0A1B6I383   A0A1B6FRJ6   A0A0N0BIX0   N6UJ07   U4U158   A0A2S2PXZ6   A0A2P8Y8M2   A0A2H8TR08   J9K484   X1WW68   A0A1L8E371   A0A1B0CCV7   A0A336JXN5   A0A195EGP5   A0A0A1WSL4   A0A0A1XKG8  

Pubmed

19121390    26354079    26227816    22118469    18362917    19820115    + More
28004739    23537049    29403074    25830018   

EMBL

BABH01006972    BABH01006973    ODYU01003910    SOQ43253.1    NWSH01000884    PCG73720.1    + More
KQ461108    KPJ09249.1    JTDY01000029    KOB79313.1    KQ459594    KPI96134.1    AGBW02011334    OWR46815.1    KQ971321    KYB28650.1    NEVH01015872    PNF26413.1    GDQN01010993    JAT80061.1    GEDC01028294    GEDC01013082    GEDC01008893    GEDC01006892    JAS09004.1    JAS24216.1    JAS28405.1    JAS30406.1    GEZM01006520    JAV95738.1    GECU01034154    GECU01032147    GECU01029181    GECU01026333    GECU01004787    JAS73552.1    JAS75559.1    JAS78525.1    JAS81373.1    JAT02920.1    GECZ01016969    JAS52800.1    KQ435724    KOX78292.1    APGK01033087    KB740860    ENN78597.1    KB631777    ERL86028.1    GGMS01001037    MBY70240.1    PYGN01000804    PSN40602.1    GFXV01004780    MBW16585.1    ABLF02028824    ABLF02036982    ABLF02028820    GFDF01001000    JAV13084.1    AJWK01007139    AJWK01007140    AJWK01007141    AJWK01007142    UFQS01000013    UFQT01000013    SSW97259.1    SSX17645.1    KQ978957    KYN27316.1    GBXI01012787    JAD01505.1    GBXI01006255    GBXI01002473    JAD08037.1    JAD11819.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000053268    UP000007151    + More
UP000007266    UP000235965    UP000053105    UP000019118    UP000030742    UP000245037    UP000007819    UP000092461    UP000078492   

PRIDE

H9ITT9   

Pfam

PF00017   SH2        + More
PF07525   SOCS_box
PF00098   zf-CCHC

Interpro

IPR035866   SOCS7_SH2        + More
IPR000980   SH2       
IPR036860   SH2_dom_sf       
IPR037346   SOCS7_SOCS       
IPR036036   SOCS_box-like_dom_sf       
IPR001496   SOCS_box       
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       

SUPFAM

SSF55550   SSF55550        + More
SSF158235   SSF158235       
SSF57756   SSF57756       

Gene 3D

3.30.505.10    

CDD

cd10388  SH2_SOCS7
cd03741  SOCS_SOCS7

ProteinModelPortal

H9ITT9   A0A2H1VQY0   A0A2A4JQN1   A0A194QVA3   A0A0L7LV02   A0A194PTQ2   + More
A0A212EZ88   A0A139WL22   A0A2J7QCW1   A0A1E1VZH6   A0A1B6C6H0   A0A1Y1NDU2   A0A1B6I383   A0A1B6FRJ6   A0A0N0BIX0   N6UJ07   U4U158   A0A2S2PXZ6   A0A2P8Y8M2   A0A2H8TR08   J9K484   X1WW68   A0A1L8E371   A0A1B0CCV7   A0A336JXN5   A0A195EGP5   A0A0A1WSL4   A0A0A1XKG8  

PDB

2VIF     E-value=3.91829e-19,     Score=235

KEGG

101741974    K04699 suppressor of cytokine signaling 6/7 | (RefSeq) uncharacterized LOC101741974

GO

GO:0035556   GO:0003676   GO:0008270   GO:0040008   GO:0016567   GO:0046935   GO:0005942   GO:0046854  

Length:

682

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00405

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00007

outside

1  -  682

 

 

Pi

22.23823

Theta

16.971105

Tajima's D

0.761454

CLR

0

CSRT

0.59822008899555

Interpretation

Uncertain