Gene

KWMTBOMO00266

Pre Gene Modal

BGIBMGA000666

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr1(+):8654886-8668110      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.496

CDS

ATGACGACGGCCAGCGTTCTATTAACGGTGACTACTGCCTGGAATGTGACAATCGAGAAAGCAGAGAATGACGGTAAGATGGGACGAACTCTAAAAAATGTGGTCGCCGAAGCCATCACAGAACTTCGAGAAACTCAGTCTACTAAGGAGCAATCTCTTCAACTTATGAGAGAGTGGATAGAACAGAATGGAGACATCAAAAACGTACGACAAGATGAAATATTTTTACTACGATTTCTGCGACATAAGAAGTATAGCATACCAATGGCCCAACAAACTTTACTTAAATATTTAAGTCTCAGAAAGTTCTACCCCGAAATTTTTAAAAATTTGGATTACGAGGATAGCAACTTACAAGAAATTATAAATAATGGGTACATAGTGGTTTCACCAGTTCGTGACAACAAGGGTCGCCGGGTCATCTTTTACAATATGAGTAAATTCAACGCCACTAGATTCAGTTGTTGGGATATGTGCCGTGCTCATATGCTTGTATATGAGAGTTTAATGGATGATCCATTAAATCAAATATGTGGGTTTAATCACATTGGCGATGGAAATGGAATTTCTGGAGCTCACATCACTGCTTGGAACCCCAGCGATTTCGGAAGGATTATAAAATGGGGGGAGCAATCGTTGTCGATGCGACACAAAGCGGTTCATCTGATAAACGTTCCCGTCGCTCTCAAATACGTCATAGACTTCGCAACATCTAAAGTGTCACAGAAAATGGCACATAGACTAAAAGTATGCACAAACTCAAAACTATTACATACACAAACAGACGTTGACTGTCTACCCACTTTATACGGAGGCAAATTAGAATTGCGTGAAATGATAGAATACACCAAGCAAATTTTGAAAGAACAAAAAGAAAATGTTCTTGCTTTGGACAACATGGAGATCCTCAGCACACGTGGGATAATTTCATCGAGAGGCAGGAACCGAGATAACAATGACAATGAAGATTTAATTTCAGTCGAAGGCAGTTTCAGAAAACTTGAAATAGATTAA

Protein

MTTASVLLTVTTAWNVTIEKAENDGKMGRTLKNVVAEAITELRETQSTKEQSLQLMREWIEQNGDIKNVRQDEIFLLRFLRHKKYSIPMAQQTLLKYLSLRKFYPEIFKNLDYEDSNLQEIINNGYIVVSPVRDNKGRRVIFYNMSKFNATRFSCWDMCRAHMLVYESLMDDPLNQICGFNHIGDGNGISGAHITAWNPSDFGRIIKWGEQSLSMRHKAVHLINVPVALKYVIDFATSKVSQKMAHRLKVCTNSKLLHTQTDVDCLPTLYGGKLELREMIEYTKQILKEQKENVLALDNMEILSTRGIISSRGRNRDNNDNEDLISVEGSFRKLEID

Uniprot

A0A0S2Z3N7   A0A2H1V4Q1   A0A2A4JBY7   A0A194QUU2   A0A2H4RMQ1   A0A212EXX4   + More
A0A2H4RMV7   A0A194PYB9   A0A0L7LV34   A0A1I8MS85   A0A1L8DZ54   A0A0L0CPL4   A0A182NM49   A0A182QY39   A0A182FCH8   A0A182MSP2   A0A2M3ZAZ2   A0A182U0G7   B0WNM0   A0A182PW99   A0A0A1XGL8   A0A1Q3F051   A0A182WKE3   A0A182VN78   A0A182LJD7   A0A182X534   Q7Q719   A0A182HLY1   A0A182Y124   W5JVA9   A0A182RMG5   B4KXK0   A0A0K8UGY8   B4IXE5   A0A034VEB7   A0A084WKL1   B4HAB9   Q2LZB5   A0A182KBB9   A0A0M4EJY4   B4MLQ7   B4LG43   A0A3B0KJ18   A0A1I8NNZ2   A0A1B0D0M1   A0A0J9RR13   A0A1W4UWZ8   A0A069DTA5   B3M3M1   B4PIX3   B4HUJ0   W8B9M2   A0A023F317   Q16PJ3   A0A182ILW2   B3NC91   Q9VRP8   A0A182G9R3   A0A182H5L3   A0A023EPM6   A0A1B6IYA5   N6U3C1   A0A0K8SQ13   A0A2J7QIH9   A0A1B6HID8   T1GSY0   A0A2S2PB09   A0A0A9WJV2   A0A2P8XVF4   A0A067RPT1   A0A1A9VDV5   A0A2H8TN62   A0A1B0FK05   A0A1B6DJD5   A0A1A9ZWI2   A0A1B0C7D8   J9K2X8   A0A1A9W4K8   A0A139WKP5   A0A336LZV6   A0A0T6B0U3   A0A139WKD4   A0A139WK97   A0A2S2QG74   A0A1J1HZN0   A0A023F2I7   E9I8F2   A0A023F3G8   A0A1B6FJZ8   A0A224XSK7   Q16EW5   E2AKP8   A0A1B6JQG9   A0A026X4A6   E2BVA7   A0A0L7QSH9   A0A0N0U5W8  

Pubmed

25684408    26354079    29136137    22118469    26227816    25315136    + More
26108605    25830018    20966253    12364791    14747013    17210077    25244985    20920257    23761445    17994087    18057021    25348373    24438588    15632085    22936249    26334808    17550304    24495485    25474469    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26483478    24945155    23537049    26823975    25401762    29403074    24845553    18362917    19820115    21282665    20798317    24508170   

EMBL

KT943563    ALQ33321.1    ODYU01000655    SOQ35807.1    NWSH01002204    PCG68913.1    + More
KQ461108    KPJ09237.1    MG434611    ATY51917.1    AGBW02011660    OWR46340.1    MG434661    ATY51967.1    KQ459594    KPI96145.1    JTDY01000029    KOB79312.1    GFDF01002346    JAV11738.1    JRES01000080    KNC34318.1    AXCN02000985    AXCM01000863    GGFM01004921    MBW25672.1    DS232013    EDS31856.1    GBXI01003758    JAD10534.1    GFDL01014118    JAV20927.1    AAAB01008960    EAA11343.4    APCN01004272    ADMH02000008    ETN68116.1    CH933809    EDW18686.1    KRG06316.1    GDHF01026367    GDHF01011649    JAI25947.1    JAI40665.1    CH916366    EDV96382.1    GAKP01018116    GAKP01018115    GAKP01018113    GAKP01018110    JAC40839.1    ATLV01024125    KE525349    KFB50755.1    CH479240    EDW37517.1    CH379069    EAL29593.2    CP012525    ALC43422.1    CH963847    EDW72983.2    CH940647    EDW69351.1    KRF84334.1    OUUW01000009    SPP85081.1    AJVK01009964    AJVK01009965    CM002912    KMY97799.1    GBGD01002017    JAC86872.1    CH902618    EDV40314.1    CM000159    EDW93543.1    CH480817    EDW50611.1    GAMC01020086    JAB86469.1    GBBI01003206    JAC15506.1    CH477779    EAT36298.1    CH954178    EDV51049.1    AE014296    AAF50745.1    JXUM01008310    KQ560257    KXJ83518.1    JXUM01027246    KQ560784    KXJ80897.1    GAPW01002620    JAC10978.1    GECU01015789    JAS91917.1    APGK01041377    KB740993    KB632256    ENN76065.1    ERL90716.1    GBRD01010456    GDHC01007132    JAG55368.1    JAQ11497.1    NEVH01013592    PNF28391.1    GECU01033278    JAS74428.1    CAQQ02114471    GGMR01013955    MBY26574.1    GBHO01036811    JAG06793.1    PYGN01001288    PSN35983.1    KK852542    KDR21724.1    GFXV01003654    MBW15459.1    CCAG010003334    GEDC01011553    JAS25745.1    JXJN01028264    ABLF02033376    KQ971328    KYB28391.1    UFQT01000211    SSX21757.1    LJIG01016276    KRT81087.1    KYB28392.1    KYB28390.1    GGMS01007533    MBY76736.1    CVRI01000035    CRK92780.1    GBBI01002885    JAC15827.1    GL761538    EFZ23179.1    GBBI01002886    JAC15826.1    GECZ01019268    JAS50501.1    GFTR01004914    JAW11512.1    CH478564    EAT32778.1    GL440368    EFN65988.1    GECU01006286    JAT01421.1    KK107015    EZA62861.1    GL450824    EFN80399.1    KQ414758    KOC61504.1    KQ435752    KOX76208.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000037510    UP000095301    + More
UP000037069    UP000075884    UP000075886    UP000069272    UP000075883    UP000075902    UP000002320    UP000075885    UP000075920    UP000075903    UP000075882    UP000076407    UP000007062    UP000075840    UP000076408    UP000000673    UP000075900    UP000009192    UP000001070    UP000030765    UP000008744    UP000001819    UP000075881    UP000092553    UP000007798    UP000008792    UP000268350    UP000095300    UP000092462    UP000192221    UP000007801    UP000002282    UP000001292    UP000008820    UP000075880    UP000008711    UP000000803    UP000069940    UP000249989    UP000019118    UP000030742    UP000235965    UP000015102    UP000245037    UP000027135    UP000078200    UP000092444    UP000092445    UP000092460    UP000007819    UP000091820    UP000007266    UP000183832    UP000000311    UP000053097    UP000008237    UP000053825    UP000053105   

PRIDE

Q9VRP8   

Pfam

PF00650   CRAL_TRIO        + More
PF03765   CRAL_TRIO_N

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR011074   CRAL/TRIO_N_dom       
IPR001251   CRAL-TRIO_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A0S2Z3N7   A0A2H1V4Q1   A0A2A4JBY7   A0A194QUU2   A0A2H4RMQ1   A0A212EXX4   + More
A0A2H4RMV7   A0A194PYB9   A0A0L7LV34   A0A1I8MS85   A0A1L8DZ54   A0A0L0CPL4   A0A182NM49   A0A182QY39   A0A182FCH8   A0A182MSP2   A0A2M3ZAZ2   A0A182U0G7   B0WNM0   A0A182PW99   A0A0A1XGL8   A0A1Q3F051   A0A182WKE3   A0A182VN78   A0A182LJD7   A0A182X534   Q7Q719   A0A182HLY1   A0A182Y124   W5JVA9   A0A182RMG5   B4KXK0   A0A0K8UGY8   B4IXE5   A0A034VEB7   A0A084WKL1   B4HAB9   Q2LZB5   A0A182KBB9   A0A0M4EJY4   B4MLQ7   B4LG43   A0A3B0KJ18   A0A1I8NNZ2   A0A1B0D0M1   A0A0J9RR13   A0A1W4UWZ8   A0A069DTA5   B3M3M1   B4PIX3   B4HUJ0   W8B9M2   A0A023F317   Q16PJ3   A0A182ILW2   B3NC91   Q9VRP8   A0A182G9R3   A0A182H5L3   A0A023EPM6   A0A1B6IYA5   N6U3C1   A0A0K8SQ13   A0A2J7QIH9   A0A1B6HID8   T1GSY0   A0A2S2PB09   A0A0A9WJV2   A0A2P8XVF4   A0A067RPT1   A0A1A9VDV5   A0A2H8TN62   A0A1B0FK05   A0A1B6DJD5   A0A1A9ZWI2   A0A1B0C7D8   J9K2X8   A0A1A9W4K8   A0A139WKP5   A0A336LZV6   A0A0T6B0U3   A0A139WKD4   A0A139WK97   A0A2S2QG74   A0A1J1HZN0   A0A023F2I7   E9I8F2   A0A023F3G8   A0A1B6FJZ8   A0A224XSK7   Q16EW5   E2AKP8   A0A1B6JQG9   A0A026X4A6   E2BVA7   A0A0L7QSH9   A0A0N0U5W8  

PDB

3HY5     E-value=6.41136e-18,     Score=222

KEGG

101736368    no KO assigned | (RefSeq) clavesin-1-like

GO

GO:0016918   GO:0005215   GO:0005622   GO:0006810   GO:0006096   GO:0005506   GO:0009072   GO:0007169   GO:0016021  

Length:

337

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01595

Exp number, first 60 AAs:

0.00235

Total prob of N-in:

0.01274

outside

1  -  337

 

 

Pi

15.154894

Theta

18.81422

Tajima's D

-0.760799

CLR

0.036059

CSRT

0.181840907954602

Interpretation

Uncertain