SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00262
Pre Gene Modal
BGIBMGA000556
Annotation
Uncharacterized_protein_OBRU01_00585_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 2.135 Nuclear   Reliability : 1.584
 

Sequence

CDS
ATGCATCCGGATATTAACAGAATGATGTTCTTCCTCGTGAGCGTCGGCCTTGTTGCATCATCCGAGGCTTTCTTCCTGAAGTGGGGCTCGGAACCTTCACAACCAACACAACAGAAGACATGGCTGCAACCGATGTCACCTAATATTTCGCCGGCCATCCGCTACCAATATACGTACACGCCTTATGACTCGCGCAAGATGTATCAGATGCAAGCACCACAATACCAACCTGAGCTTCAGATGCAGCAGAGCATGGCACCTATCCCCATTAGTATTCCGGCCGGTGCAAGCCTGACGCCTGTCTCTTTGCAACACGTTCAACTTGTGCCCTGCATGTGCCCAGTAGCTCCTGAAGAGGCGGAGAAGCTGCAAGAACAAACCGGCCCCGGTCCGTACGTAGCACAAACCTACACGCCCGCGTCATACCCTGTGGCACAGCAAGTTCCCGTCGCACAAGATAGCTCGAAGACAACGAACAAACAATAG
Protein
MHPDINRMMFFLVSVGLVASSEAFFLKWGSEPSQPTQQKTWLQPMSPNISPAIRYQYTYTPYDSRKMYQMQAPQYQPELQMQQSMAPIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQTGPGPYVAQTYTPASYPVAQQVPVAQDSSKTTNKQ

Summary

Ontologies

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.936527
 
 
Length:
161
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.39816
Exp number, first 60 AAs:
1.37718
Total prob of N-in:
0.18381
outside
1  -  161
 
 

Population Genetic Test Statistics

Pi
17.554705
Theta
17.4753
Tajima's D
-1.769786
CLR
0.142734
CSRT
0.0289985500724964
Interpretation
Uncertain
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