SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00258
Pre Gene Modal
BGIBMGA000558
Annotation
PREDICTED:_uncharacterized_protein_LOC106133778_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.545
 

Sequence

CDS
ATGGATTGGTTAAAGTTGTTTGTCCTTCTGGCTGTATCAGCAGTCATCACCGTTCAAGTTTCTGCAGAAGGACCAAAAAAAAAGATTCGCATCCACTTACCGCAGAAGGTAAAGCATATTCATCATCATAAGAAGATTTACATAACCAACCACCCGTCCTCACAGTATGCGCCGGCATACATGCCAAGTGCCAAGGGCGCTGTAGCAGTGCCTACTAACATCGCCCTGCCTGCAGTAGCCAGCATCGTACCCCTAAACTCTGTCGAAATATATGAAGAGTCTCCGACACGAACGCCCGGAACGTCAGTTACTGCTTCAAAGCTTTTGCCTCTTTATCGCGCAAGAGGCTATTATGGACCCACACCAACGGACTGGGAAGATCAGGAATACGATTTGGTTGCTCCTCATGAAGCATCGGATTCTTCATATTTACCGACAGCTTTCGCAGAACCTCCGGGGCCTAGCATTGTACCTCATAATCATGCACCGAAGAAAGTTAAAGTTGTGAAGATAAACGAAACGCCACGAAAAAAGATTGTACGAAAAAACAAACCAAAGCGCTTAATTGTACGAGGTCGACCTCAACTAGAAGAGGAACATCCAGTATCTGTTTTTCATGAACAATTTTATTCTGAATTGGACGGGTCTGGTACCATAAGAAAAATAAAAAAACCACCAAGAGTTGAGAAAATTATTGACGGAGACACTGAGCACATTCACACATACAACGAGGAACATATTCATAAACTAGTATTAGATGACGACGCTAAAATATCTGGAATACACTCAGCAGGAGGTGTATCTTCCTTACCAGTACAGCATTCGCTTATTCCCTTAAGAAGCTCTCAACCGATTCTAACTTTTTCTCCAGATACTCTAACAGGATACACAGCAATAGGATCTATGGGAACTCCATCGCATTTAGAATATGCCGCTTATAACCCAAGAGATGTTACACATGATCATATATTCCACGACCATGGTGAAATACCTCCTGAACTAGATATAATACCGGATCCTTCATCGACTCCACTAAGAATTTCCCACGCCCATGAAGATATTAGAAACGGAGGGGTAAACAATAGAATCAAAAATAAATATATGCGTAAATACGGAAAGCCAACAACTACGCCATTTCCCGATTTGTCTTATGAAAACATGTATTCTTCAGTGAACAAGATTAAGAAACTAAAATTTCGACCGACTTCGCAATTTGATACTTCTTCCGAAAATGTACAAAACGATTTCCGTCCTATACCAGATTTTAATTTCAAAAACAAGAGAATAAAAAAAACCAAAAACTTAGTACCAGCCTTCGATTTTAATATCGATAAACATGTAAATGATTATGGCACATCACAAACAGGCATACAAGATCCATTTTCAGTCTCTTCAACAGTGATTCACAACTATAAACCAAAGACTTTAACAGGGCAAGGATTTCAAAAATTTGCAAATCCTTTACTTAATTTTAAGGACAATAGTTTCACAAGCAACTATGCATTCGATACTTCTGCATCATCATCGAACATAGTCACATCAGAAGATAAAAATATTAATGCACCGCGAACATTTTCGGCTAAAAGGGGTAAAAAGAAATCGATATCTACACAAAATATAAGTTTTGGCGGTTCCGGTCATCAAACAACGGTAGATCATTGGGATGATACTGATATAGCTTCCTTCCCTAACGAACAGTCCCCTAGTGGTAACGGAAATTATAATTTTGAACAAACACAACCTTTAGGCACTGTAACTCCTATGCCTTTCACAATAAAAGAATCATCCCCAATGCATTCTTACTATTCCGATATGGCAAGAAAAGCATTACATTCTCACAATTTATCCGTACCGCAAGCTTCAAACGATAATTTCCAGTATGTCGAAGCACCTGTCTCAACAACTACTCCGTATTTCTCTTTATTAGCAACAACAGCTGTACCTCCTGAAAAAAAAGATGTGGAAACCGTAGATACTGTAGCATTTGAACAATCTCAATATCAAGAGGCTAAAGCAAGACAACGAAGTAGTAATAAAGAAGATAATTCTAACGTTTCACATAACAGTCGACCAAGAAAAAGAATTCGGGCATTGAAATTGAATACATTGCCGGAAGAAAATAATAAAGAAAAAACAAATGTGGGAACCATTCGGTCAAAGTCGAATAAGCTGTCATATCTTCTAGAATCTCCGGCTACAACAAGTAAATTAAATTACGGTGATAAAATTTGA
Protein
MDWLKLFVLLAVSAVITVQVSAEGPKKKIRIHLPQKVKHIHHHKKIYITNHPSSQYAPAYMPSAKGAVAVPTNIALPAVASIVPLNSVEIYEESPTRTPGTSVTASKLLPLYRARGYYGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAEPPGPSIVPHNHAPKKVKVVKINETPRKKIVRKNKPKRLIVRGRPQLEEEHPVSVFHEQFYSELDGSGTIRKIKKPPRVEKIIDGDTEHIHTYNEEHIHKLVLDDDAKISGIHSAGGVSSLPVQHSLIPLRSSQPILTFSPDTLTGYTAIGSMGTPSHLEYAAYNPRDVTHDHIFHDHGEIPPELDIIPDPSSTPLRISHAHEDIRNGGVNNRIKNKYMRKYGKPTTTPFPDLSYENMYSSVNKIKKLKFRPTSQFDTSSENVQNDFRPIPDFNFKNKRIKKTKNLVPAFDFNIDKHVNDYGTSQTGIQDPFSVSSTVIHNYKPKTLTGQGFQKFANPLLNFKDNSFTSNYAFDTSASSSNIVTSEDKNINAPRTFSAKRGKKKSISTQNISFGGSGHQTTVDHWDDTDIASFPNEQSPSGNGNYNFEQTQPLGTVTPMPFTIKESSPMHSYYSDMARKALHSHNLSVPQASNDNFQYVEAPVSTTTPYFSLLATTAVPPEKKDVETVDTVAFEQSQYQEAKARQRSSNKEDNSNVSHNSRPRKRIRALKLNTLPEENNKEKTNVGTIRSKSNKLSYLLESPATTSKLNYGDKI

Summary

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.993812
 
 
Length:
743
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.28838
Exp number, first 60 AAs:
1.27077
Total prob of N-in:
0.06837
outside
1  -  743
 
 

Population Genetic Test Statistics

Pi
21.640082
Theta
18.602679
Tajima's D
0.071975
CLR
0
CSRT
0.394030298485076
Interpretation
Uncertain
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