SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00256  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000661
Annotation
PREDICTED:_protein_disulfide-isomerase_A5_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.227 ER   Reliability : 1.758
 

Sequence

CDS
ATGGTCAGTAAAATGCATTGGACGGTGCTCACATTGATGACCATATCACTAGTGTTATCTTCAGTTGAAACTAAGAAGCAGAAGACTGCAGTTTTATCAGATATAAGTGACATAAAAGATTTTAAAAAGATACTTAGAACTAAAACCAATGTTTTAGTTTTATTTGTCAATGAAATGAAAAAGGCACATAATATGGTAGAGGTATTTAAAGAAACTGCTGATACAATGAGAGGGCAAGCTACGTTAATTTTGATTGATTGTAACAACAGTGACAACAAAAAACTATGTAAGAAGTTGAAAGTATCACCAGAAAAGCCATTCATTTTAAAACACTATAAAGACGGAGACTTCAATAAGGATTATGACAGAAGTGAATCTGTCAGTTCAATGTGCAATTTCCTGCGAGATCCTACTGGAGACTTGCCTTGGGAAGAGGATCCTACAGCTGTTGATATTTATCACCTTCTTGATGGAGAGGCCATTGTGAAATTCTTGAAGAAAGGTCCTGGTTCACACAAGAGATCTATGATAATGTTTTATGCTCCTTGGTGTGGGTACTGTAAATCAATGAAACCTGATTATGTTGAGGCAGCTGGGGATCTCAAGGGCGAGTCAATTTTAGCTGCAATTGATGTAGCTAAGCCTGGAAATTCTAAAATAAGACAGTTGTATAATATAACTGGGTTTCCTACTCTGTTGTATTTTGAGAGGGGCCAGTTTCGCTTTCCATATAATGGTGAAAACAAAAGGCAAGCCATAGTCGAGTTTATGAGAGATCCCGTAGCTCAGCCGAAACAGAAAAAGAAAGACGTTGTTGATGAAAGCTGGGCTCGTGACACTGATGTGGTGCATTTAAATGGGGACAGTTTTGACGCTATTCTAGCAAAGGCGGAACACGCACTGGTCGTATTCTACGCGCCCTGGTGTGGACACTGCAAACGTATTAAACCAGAGTTCGAAAAAGCGGCCACAAAGATAAAGACTGAAAAGATTAACGGAATATTAGCAGCTGTCGATGCTACAAAGGAGCCAGATTTAGCGTCGAGATTTGGTGTCAAGGGATATCCGACTCTGAAATATTTTAATAAAGGCGAATTTAAGTTCGACGCTGGACATGCCCGACAAGAAGACCAGATTATTAGTTTTATCAAGGACCCGCAAGAGCCACCCCCACCCCCACCACCAGAAAAGCCATGGTCCGAGGAAGAGTCTCCCGTGCGCCACCTCGACTCCTCGACTTTCAGAAACACACTCCGGAAAATCAAACACAGCATTGTCATGTTCTACGCGCCATGGTGCGGCCACTGCAAAAGCACCAAGCCTGAATTCGTTAAGGCGGCGGAACAGTTTGCCGATGAACTGATGGTTGCTTTTGGAGCTGTCGATTGTACTCTACATCAGGATTTGTGCGCTAACTACAACGTCAAGGGCTACCCGACCATTAAGTATTTTAGTTACTTTGATAAAGCGGTTAAGGACTACACGGGAGGCCAGAAGGAAGGCGACTTTGTTTCGTTTATACACAATCAAATGGGGACTAAGCAGACTTCACAAAAGGCCCCCAAGACAACCCAGGACGCGGGTTTCGGTGCTAACGTCTTATTGGCCTTCGACGATGACTTTGAGAAGATAATATCTGTGCCCACGCCCACGATTGTCATGTTCTATGCTACATGGTGCAGCCACTGCGTGACAGCGAAGCCGGCCTTCAGCAGACTCGCTACAGCGCTTAAGACGGAAAATGTACCGGTGAAAGCGGTCGCTTTAGAAGCGGCTGAAAATCCGAAAGCGGCTGACTTCGCAGGCATACAAACTCTGCCCACGTTCAAACTGTTTGCGGCCGGAAAATACGTGACCGACTACGACGGAGATCGGTCCACAGAAGACTTGCTCAAATTCTGCAAGAGGCACGCCGAGGTTAAAGACGAACTGTGA
Protein
MVSKMHWTVLTLMTISLVLSSVETKKQKTAVLSDISDIKDFKKILRTKTNVLVLFVNEMKKAHNMVEVFKETADTMRGQATLILIDCNNSDNKKLCKKLKVSPEKPFILKHYKDGDFNKDYDRSESVSSMCNFLRDPTGDLPWEEDPTAVDIYHLLDGEAIVKFLKKGPGSHKRSMIMFYAPWCGYCKSMKPDYVEAAGDLKGESILAAIDVAKPGNSKIRQLYNITGFPTLLYFERGQFRFPYNGENKRQAIVEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATKIKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIKDPQEPPPPPPPEKPWSEEESPVRHLDSSTFRNTLRKIKHSIVMFYAPWCGHCKSTKPEFVKAAEQFADELMVAFGAVDCTLHQDLCANYNVKGYPTIKYFSYFDKAVKDYTGGQKEGDFVSFIHNQMGTKQTSQKAPKTTQDAGFGANVLLAFDDDFEKIISVPTPTIVMFYATWCSHCVTAKPAFSRLATALKTENVPVKAVALEAAENPKAADFAGIQTLPTFKLFAAGKYVTDYDGDRSTEDLLKFCKRHAEVKDEL

Summary

Similarity
Belongs to the protein disulfide isomerase family.
EMBL
BABH01006945    KZ149961    PZC76327.1    NWSH01000478    PCG76109.1    PCG76107.1    + More
KQ459594    KPI96168.1    AGBW02007730    OWR54657.1    KQ461108    KPJ09218.1    ODYU01001651    SOQ38171.1    JTDY01003791    KOB69003.1    GEZM01095270    JAV55436.1    LJIG01022528    KRT80104.1    GGFK01009398    MBW42719.1    GGFK01009399    MBW42720.1    NEVH01011186    PNF32184.1    CH477499    EAT39913.1    GAPW01000479    JAC13119.1    KQ971382    EEZ97186.1    ADMH02001180    ETN63816.1    GGFJ01003213    MBW52354.1    GGFM01006050    MBW26801.1    GGFJ01003209    MBW52350.1    APCN01005234    JXUM01025946    KQ560739    KXJ81065.1    AAAB01008980    EAA14324.4    AXCN02001858    KK852470    KDR23255.1    GFDL01009390    JAV25655.1    GFDL01009314    JAV25731.1    GFDL01009267    JAV25778.1    PYGN01000002    PSN58434.1    DS233443    EDS30028.1    GFDL01009152    JAV25893.1    GFDL01009097    JAV25948.1    UFQS01000396    UFQS01001481    UFQT01000396    UFQT01001481    SSX03604.1    SSX11169.1    SSX23969.1    KB632309    ERL92070.1    APGK01044530    APGK01044531    KB741026    ENN74957.1    ENN74958.1    GFDL01009387    JAV25658.1    GACK01005077    JAA59957.1    GFDL01009469    JAV25576.1    IAAA01005327    LAA01943.1    AJVK01010273    AJVK01010274    AJVK01010275    AJVK01010276    IAAA01005328    LAA01944.1    AXCM01000229    GACK01003482    JAA61552.1    PZQS01000002    PVD35860.1    GFDL01009231    JAV25814.1    GDIP01150040    JAJ73362.1    GDIQ01137071    JAL14655.1    GDIP01217568    JAJ05834.1    GFWV01019155    MAA43883.1    AJWK01035530    GDIP01166679    GDIP01050394    LRGB01000024    JAM53321.1    KZS21530.1    ATLV01022925    KE525338    KFB48123.1    GFDL01009248    JAV25797.1    GFTR01007576    JAW08850.1    GDIQ01089501    JAN05236.1    GDIP01187928    JAJ35474.1    GFAC01003991    JAT95197.1    GDIP01111288    JAL92426.1    GECL01003416    JAP02708.1    GDIP01078937    JAM24778.1    GBGD01000818    JAC88071.1    GDIQ01102147    JAL49579.1    GFJQ02007419    JAV99550.1    GDHC01009487    GDHC01004840    JAQ09142.1    JAQ13789.1    GBHO01031046    GBHO01027525    GBHO01027524    GBHO01027523    GBHO01027522    GBHO01027519    GBHO01027518    GBHO01027517    GBHO01018558    GBHO01010776    GBHO01010773    GBHO01010772    JAG12558.1    JAG16079.1    JAG16080.1    JAG16081.1    JAG16082.1    JAG16085.1    JAG16086.1    JAG16087.1    JAG25046.1    JAG32828.1    JAG32831.1    JAG32832.1    ACPB03004561    KK120151    KFM77636.1    GBRD01007034    JAG58787.1    LJIJ01001583    ODM91354.1    GDIQ01007777    JAN86960.1    GDIP01066101    JAM37614.1    GDIP01008729    JAM94986.1    CM000157    EDW88301.1    GBXI01010534    JAD03758.1    GDRN01029748    JAI67587.1    AY052131    AAK93555.1    AMQN01008724    KB303819    ELU02742.1    AE014134    BT150135    AAF53293.1    AGO63478.1    CM000361    CM002910    EDX04916.1    KMY90087.1    CH954177    EDV58689.1    CH480831    EDW46034.1    GAKP01003873    GAKP01003872    JAC55080.1    GANP01008370    JAB76098.1    GANP01008371    JAB76097.1    GDHF01014243    JAI38071.1    GDHF01029179    JAI23135.1   
Pfam
PF00085   Thioredoxin        + More
PF01246   Ribosomal_L24e
Interpro
IPR017937   Thioredoxin_CS        + More
IPR013766   Thioredoxin_domain       
IPR036249   Thioredoxin-like_sf       
IPR005788   Disulphide_isomerase       
IPR041865   PDIA5_N_PDI_b       
IPR000988   Ribosomal_L24e-rel       
IPR038630   L24e/L24_sf       
IPR011017   TRASH_dom       
SUPFAM
SSF52833   SSF52833       
Gene 3D
PDB
3IDV     E-value=9.66996e-31,     Score=335

Ontologies

Topology

SignalP
Position:   1 - 24,         Likelihood:  0.949636
 
 
Length:
644
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.07642
Exp number, first 60 AAs:
0.85796
Total prob of N-in:
0.04641
outside
1  -  644
 
 

Population Genetic Test Statistics

Pi
7.593617
Theta
19.956325
Tajima's D
-1.569334
CLR
0.007921
CSRT
0.0515474226288686
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 YVTDYDGDRSTEDIIK 100.00 1e-04
26280517 EGDDIFATKK 100.00 1e-04
28556443 SMKPDYVEAAGDLK 100.00 1e-04
26822097 DVVDESWAR 100.00 6e-04
28556443 AVALEAAENPK 100.00 0.007
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