Gene

KWMTBOMO00251

Annotation

PREDICTED:_uncharacterized_protein_LOC106713896?_partial_[Papilio_machaon]

Location

Bomo_Chr1(-):8507457-8508295      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.224 Mitochondrial   Reliability : 1.266

CDS

ATGCTTGCTAACACTGAGTACTTGCACAGACATAACCAAGCAGCCAGAATCCTCCACCACGAGCTCGCCCTTAAGTATGGCCTCATCGAACAGCGGCTACCGTATAATAAGTACCAGCCGGACGCCGTACTCGAAAACGACCGCGCCAAGCTCTACTGGGACCGACCCATCATCACGGACAGGACTATTCTTGCGAATAAGCTTGATATCGTGTTGATGGACCAGATGGAGTCTCGGGTATTTCTGGTGGATATCACCATCCCCTACGACGAGAACCTCGTGCGGGCCGAGGCAGATAAAAAGACCAAATATTTGGACATGTCGCACGAGGTGACCGACATGGCGAGGGTGGTATCTACAGAAATAATCCCGGTAGTTGTATTGGTGAATGGTTTGGTCCCTAAAAGCCTCTCAAAACATCTCGAGAGGCTTGGTTTCAAGAGAAAGTCGGTGGTGGCCCAAATGCAAAAAGCAGTCTTGCTGGACAATGCCCCTCTAGTTCGCCGGATTCTCGCCTAA

Protein

MLANTEYLHRHNQAARILHHELALKYGLIEQRLPYNKYQPDAVLENDRAKLYWDRPIITDRTILANKLDIVLMDQMESRVFLVDITIPYDENLVRAEADKKTKYLDMSHEVTDMARVVSTEIIPVVVLVNGLVPKSLSKHLERLGFKRKSVVAQMQKAVLLDNAPLVRRILA

Uniprot

A0A2A4JL63   A0A1Y1MCA6   A0A1Y1MG39   A0A1Y1NK13   W8BF34   A0A1S3CYA3   + More
H3AB60   H3B642   A0A2W1BC23   H2ZWF0   A0A3Q0JI71   A0A2H1VUG2   H3APZ7   A0A1Y1MT60   H3ATI1   A0A2H1WV36   A0A1S3DB34   D7GY63   H3A9J0   A0A1S4EQ35   A0A336M9S3   A0A1S3DFN1   A0A1S4ECF3   A0A1Y1KYK5   H3BFH8   Q76IN5   H3B0R3   D7GYL6   H3AA26   H3AS73   H3BBL0   A0A3Q0J2S4   A0A2J7R2D2   A0A3B3I0I7   A0A3P9MNJ5   W8AXW6   A0A2J7RGT7   A0A3P8NFL6   A0A3P8PU69   A0A2H1VQZ6   A0A2J7PSM8   A0A087XGF1   A0A2J7PIT9   A0A3P8Q3U1   A0A3B3HW39   A0A3P8QTM2   A0A3P8PSV9   A0A2J7PDQ6   A0A3P8QAR5   A0A3P8Q816   A0A3P8PU63   A0A3B3HQX9   A0A3P8PST2   A0A3P8Q8N4   A0A3P8QRC6   A0A3P8PUT7   A0A3P8NLS5   A0A3P8P1I6   A0A3P8P1Q8   A0A3P8NRB8   A0A3P8QPZ9   A0A3P8QC13   A0A3P8R5E8   A0A3P8NVY4   A0A3P8NKM6   A0A3P8P9Q9   A0A3P8P8J8   A0A3P8PIV2   R4GCF3   A0A3P9K6Z6   A0A3P8NT65   A0A3P8QJR1   A0A3P9QFG6   A0A3P9LVD0   A0A3P8QK92   A0A3B3H8G1   A0A3P9MMW4   A0A3P8PQZ9   R4G9X1   A0A3P8QEL7   A0A0L8FXY1   A0A3B3ILW9   A0A2I4AQW5   A0A3B3HU40   A0A1X7U4Q0   A0A3P9M4C8   R4GAP2   A0A3B3H9G8   A0A3B3I5C9   A0A3B5PPD0   A0A3P9DUW1  

Pubmed

28004739    24495485    9215903    28756777    18362917    19820115    + More
12949131    17554307    21881562    23542700    25186727   

EMBL

NWSH01001199    PCG72152.1    GEZM01035223    JAV83334.1    GEZM01035222    JAV83335.1    + More
GEZM01000831    JAV98263.1    GAMC01018221    JAB88334.1    AFYH01227415    AFYH01087503    KZ150607    PZC70460.1    AFYH01259886    ODYU01004516    SOQ44481.1    AFYH01153992    GEZM01022180    JAV88769.1    AFYH01046062    ODYU01011284    SOQ56923.1    GG695107    EFA13287.1    AFYH01147180    UFQT01000728    SSX26770.1    GEZM01072183    JAV65591.1    AFYH01026690    AB097127    BAC82595.1    AFYH01017561    GG695857    EFA13462.1    AFYH01207636    AFYH01158743    AFYH01052121    NEVH01007832    PNF34997.1    GAMC01016897    JAB89658.1    NEVH01003752    PNF40040.1    ODYU01003901    SOQ43240.1    NEVH01021925    PNF19338.1    AYCK01026151    NEVH01024955    PNF16260.1    NEVH01026385    PNF14463.1    AAWZ02035408    AAWZ02024166    KQ425383    KOF69538.1   

Proteomes

UP000218220    UP000079169    UP000008672    UP000007266    UP000235965    UP000001038    + More
UP000265180    UP000265100    UP000028760    UP000001646    UP000242638    UP000053454    UP000192220    UP000007879    UP000002852    UP000265160   

Pfam

PF00078   RVT_1        + More
PF08205   C2-set_2
PF00096   zf-C2H2

Interpro

IPR000477   RT_dom        + More
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR036116   FN3_sf       
IPR003961   FN3_dom       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR013162   CD80_C2-set       
IPR001611   Leu-rich_rpt       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       
SSF57667   SSF57667       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A2A4JL63   A0A1Y1MCA6   A0A1Y1MG39   A0A1Y1NK13   W8BF34   A0A1S3CYA3   + More
H3AB60   H3B642   A0A2W1BC23   H2ZWF0   A0A3Q0JI71   A0A2H1VUG2   H3APZ7   A0A1Y1MT60   H3ATI1   A0A2H1WV36   A0A1S3DB34   D7GY63   H3A9J0   A0A1S4EQ35   A0A336M9S3   A0A1S3DFN1   A0A1S4ECF3   A0A1Y1KYK5   H3BFH8   Q76IN5   H3B0R3   D7GYL6   H3AA26   H3AS73   H3BBL0   A0A3Q0J2S4   A0A2J7R2D2   A0A3B3I0I7   A0A3P9MNJ5   W8AXW6   A0A2J7RGT7   A0A3P8NFL6   A0A3P8PU69   A0A2H1VQZ6   A0A2J7PSM8   A0A087XGF1   A0A2J7PIT9   A0A3P8Q3U1   A0A3B3HW39   A0A3P8QTM2   A0A3P8PSV9   A0A2J7PDQ6   A0A3P8QAR5   A0A3P8Q816   A0A3P8PU63   A0A3B3HQX9   A0A3P8PST2   A0A3P8Q8N4   A0A3P8QRC6   A0A3P8PUT7   A0A3P8NLS5   A0A3P8P1I6   A0A3P8P1Q8   A0A3P8NRB8   A0A3P8QPZ9   A0A3P8QC13   A0A3P8R5E8   A0A3P8NVY4   A0A3P8NKM6   A0A3P8P9Q9   A0A3P8P8J8   A0A3P8PIV2   R4GCF3   A0A3P9K6Z6   A0A3P8NT65   A0A3P8QJR1   A0A3P9QFG6   A0A3P9LVD0   A0A3P8QK92   A0A3B3H8G1   A0A3P9MMW4   A0A3P8PQZ9   R4G9X1   A0A3P8QEL7   A0A0L8FXY1   A0A3B3ILW9   A0A2I4AQW5   A0A3B3HU40   A0A1X7U4Q0   A0A3P9M4C8   R4GAP2   A0A3B3H9G8   A0A3B3I5C9   A0A3B5PPD0   A0A3P9DUW1  

KEGG

101742326    no KO assigned | (RefSeq) zinc finger and BTB domain-containing protein 41-like

GO

GO:0016021   GO:0003964  

Length:

172

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.333000000000001

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.17137

outside

1  -  172

 

 

Pi

5.211836

Theta

10.17313

Tajima's D

-1.418174

CLR

0.016064

CSRT

0.0694465276736163

Interpretation

Uncertain