SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00248
Pre Gene Modal
BGIBMGA000561
Annotation
cold-related_protein_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 4.369
 

Sequence

CDS
ATGAAACTAATACAATGTGTTTTTGTCATTGTTTTGCTAATGGCAGTAACGGTGTGCAGCAGTCCTTTGCTAACACAAACACCATTCAGTGAGGAGGATTGCATCAGACAAGGAGGTATATGCGTGCGCACGGAGGAATGTGATCCAGACAACATATCGACGATTTCGCAATTTCTATGTCCAAACCAAGCGCACCTTGGAGTAGCCTGCTGCTATGTCTGA
Protein
MKLIQCVFVIVLLMAVTVCSSPLLTQTPFSEEDCIRQGGICVRTEECDPDNISTISQFLCPNQAHLGVACCYV

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.997038
 
 
Length:
73
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.51557
Exp number, first 60 AAs:
20.51357
Total prob of N-in:
0.95209
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  73
 
 

Population Genetic Test Statistics

Pi
14.075411
Theta
16.710629
Tajima's D
-0.822936
CLR
0.005405
CSRT
0.171641417929104
Interpretation
Uncertain
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