Gene

KWMTBOMO00247

Pre Gene Modal

BGIBMGA000562

Annotation

PREDICTED:_BTB/POZ_domain-containing_protein_KCTD1_[Bombyx_mori]

Location

Bomo_Chr1(-):8428230-8456525      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.88 Mitochondrial   Reliability : 1.22 Nuclear   Reliability : 1.186

CDS

ATGTTGCCAATTAAACCAGGAAGTCCCCAGCCCGATGGTAGCTCGATGGAGAAGAAGCCAATTCCCGGCATCCCTAGAGTTGCAGCGACTACGAAGTATAACGCCCCGGTACATATTGATGTCGGCGGAACTATCTACACATCTTCTCTGGAAACCCTAACTGCTTATCCGGAGTCTCGCCTCGGCAAGATGTTCAACGGAACCATTCCCATCGTACTGGATACGCTGAAGCAGCATTATTTCATCGACAGGGACGGTGGCATGTTCCGTCACATTCTCAACTTTTTGCGTAATAAAAAACTATTACTGCCTACCGATTTCCCCGATATGGAACTCTTACTACACGAGGCACACTACTTCGAACTAGATCACATGGTGTTCGCTTTGTCGAAACTGAAACATGGGCGTGAGGGGGTGAAGCATGAGTGCGAGTGGTTGAGCGACGCCAGCGATCGCCTCAAGCAGGAGACCGAGCTCCTCATGCAGGAAAGAGACCGGCTGCAGCAACGATGGTCATGA

Protein

MLPIKPGSPQPDGSSMEKKPIPGIPRVAATTKYNAPVHIDVGGTIYTSSLETLTAYPESRLGKMFNGTIPIVLDTLKQHYFIDRDGGMFRHILNFLRNKKLLLPTDFPDMELLLHEAHYFELDHMVFALSKLKHGREGVKHECEWLSDASDRLKQETELLMQERDRLQQRWS

Uniprot

H9ITI2   A0A2A4IVE7   A0A2H1VXK7   A0A2W1BUK9   A0A212ELP1   A0A194PS73   + More
A0A1J1IBW6   A0A1J1I6P3   K7J714   A0A2A3ELB5   A0A1Y1M7N3   A0A087ZU98   A0A232EK42   A0A194QUL8   A0A084WJX7   A0A182IX18   A0A182Y275   A0A182NJN9   A0A2J7RSC9   A0A1B0CKD5   D6WBG0   I4DRA8   J9JSP0   A0A2S2NPF4   A0A2H8U112   A0A0P5M7K2  

Pubmed

19121390    28756777    22118469    26354079    20075255    28004739    + More
28648823    24438588    25244985    18362917    19820115    22651552   

EMBL

BABH01006932    NWSH01006394    PCG63466.1    ODYU01005061    SOQ45570.1    KZ149961    + More
PZC76336.1    AGBW02014006    OWR42405.1    KQ459594    KPI96162.1    CVRI01000043    CRK95929.1    CRK95928.1    KZ288223    PBC31949.1    GEZM01038689    JAV81561.1    NNAY01003899    OXU18692.1    KQ461108    KPJ09223.1    ATLV01024081    KE525348    KFB50521.1    NEVH01000261    PNF43746.1    AJWK01016037    KQ971313    EEZ97887.2    AK405044    BAM20448.1    ABLF02012397    GGMR01006398    MBY19017.1    GFXV01008074    MBW19879.1    GDIQ01159580    JAK92145.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000183832    UP000002358    + More
UP000242457    UP000005203    UP000215335    UP000053240    UP000030765    UP000075880    UP000076408    UP000075884    UP000235965    UP000092461    UP000007266    UP000007819   

PRIDE

H9ITI2   

Pfam

PF02214   BTB_2

Interpro

IPR000210   BTB/POZ_dom        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR003131   T1-type_BTB       

SUPFAM

SSF54695   SSF54695       

ProteinModelPortal

H9ITI2   A0A2A4IVE7   A0A2H1VXK7   A0A2W1BUK9   A0A212ELP1   A0A194PS73   + More
A0A1J1IBW6   A0A1J1I6P3   K7J714   A0A2A3ELB5   A0A1Y1M7N3   A0A087ZU98   A0A232EK42   A0A194QUL8   A0A084WJX7   A0A182IX18   A0A182Y275   A0A182NJN9   A0A2J7RSC9   A0A1B0CKD5   D6WBG0   I4DRA8   J9JSP0   A0A2S2NPF4   A0A2H8U112   A0A0P5M7K2  

PDB

5BXD     E-value=5.29818e-35,     Score=365

KEGG

101746809    K21754 BTB/POZ domain-containing protein KCTD1/15 | (RefSeq) BTB/POZ domain-containing protein KCTD1

GO

GO:0051260   GO:0005515   GO:0042423   GO:0004497   GO:0005506   GO:0009072   GO:0006810   GO:0007169   GO:0016021  

Length:

172

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00611

Exp number, first 60 AAs:

0.00489

Total prob of N-in:

0.02791

outside

1  -  172

 

 

Pi

28.837963

Theta

22.090976

Tajima's D

0.036888

CLR

0.022189

CSRT

0.385130743462827

Interpretation

Uncertain