Silkworm Genome Informatics Database

Gene

KWMTBOMO00245

Pre Gene Modal

BGIBMGA000656

Annotation

hypothetical_protein_BGIBMGA000656_[Bombyx_mori]

Location

Bomo_Chr1(+):8385611-8386048 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.671 Nuclear Reliability : 1.511

CDS

ATGGCTGATTGGTCTCTGCTGCACCGCGAGTGGGCCGACTATTACAACCCCTATCTATACCAAGGGTACCCGCCGTACCAGCAACAAGGGGTGGCGGTTCCACAGAATGCGCCCCCGCCGCAAGCGCAACCGTATAATATGCGGCAGAATTCGCCGGCTCTGGCATTGCTGCTGAATACGCAGCGTAACCAGATGCCTCTAGATCCTATTATCTGTCCCCAACCCAGCGGAAGTGATGAGCAGCCACCCAAAGTGTAA

Protein

MADWSLLHREWADYYNPYLYQGYPPYQQQGVAVPQNAPPPQAQPYNMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPPKV

Uniprot

E7E1N0 E7E1N3 E7E1N4 E7E1N1 E7E1N6 E7E1N2 + More
B0LL82 D4Q9H9

Pubmed

19121390 21212153 23300902 22753472

EMBL

BABH01006929 HQ589886 HQ589893 HQ589894 HQ589895 HQ589896 + More
HQ589897 HQ589898 HQ589899 HQ589900 ADV33073.1 ADV33080.1 ADV33081.1 ADV33082.1 ADV33083.1 ADV33084.1 ADV33085.1 ADV33086.1 ADV33087.1 HQ589889 ADV33076.1 HQ589890 HQ589891 ADV33077.1 ADV33078.1 HQ589887 ADV33074.1 HQ589892 ADV33079.1 HQ589888 ADV33075.1 EU249372 ABY76059.1 AB359912 BAJ05086.1

Proteomes

UP000005204

PRIDE

E7E1N0 E7E1N3 E7E1N4 E7E1N1 E7E1N6 E7E1N2 + More
B0LL82 D4Q9H9

Pfam

PF00010 HLH

Interpro

IPR011598   bHLH_dom        + More
IPR000014   PAS
IPR001067   Nuc_translocat
IPR036638   HLH_DNA-bd_sf
IPR035965   PAS-like_dom_sf

SUPFAM

SSF47459 SSF47459 + More
SSF55785 SSF55785

Gene 3D

4.10.280.10

CDD

cd00130 PAS
cd00083 HLH

ProteinModelPortal

E7E1N0 E7E1N3 E7E1N4 E7E1N1 E7E1N6 E7E1N2 + More
B0LL82 D4Q9H9

KEGG

100141425 no KO assigned | (RefSeq) BmMET2; juvenile hormone resistence protein II

GO

GO:0005737 GO:0005634 GO:0046983 GO:0005667 GO:0003700

Subcellular location

Nucleus

Length:

85

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.18998

outside

1 - 85

Pi

13.327871

Theta

10.638577

Tajima's D

0.745181

CLR

0.049698

CSRT

0.608369581520924

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics