Gene

KWMTBOMO00236

Pre Gene Modal

BGIBMGA000646

Annotation

PREDICTED:_transcription_initiation_factor_TFIID_subunit_7-like_[Papilio_polytes]

Location

Bomo_Chr1(+):8010171-8012090      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.864

CDS

ATGAATAAAGACAAACGAGAACTAGAATATCCGGCTGAATTAGAGTCACAGTTCATACTTAAGCTTCCTGAACATCCTGCTAAAATACTACGAGAATTGTTAAAGTCAGGTGAGAATTTGAAAAATCGTCTTACCATACAGATTGATAATGATATGCGGCGTGGAGAGGTACGCTTGGATCATTGGTTGATGCATGCTAAAATAATTGACCTTCCAACTATTGTCGAGTCCTTGAAAACTATTGATGGTAAAAGTTTCTATAAAACAGCAGATATTTGTCAAATGATGATTTGCAAAGATGGACCAGACCAACCAATAGCTGAAGAAGAAATACCAACAAAAAATAAAAAAAAGGATCCTTATAAGGTAGATAAAAAGTATTTGTGGCCCCATGGTGTAACTCCACCAACTAAGAATGTTCGTAAACGCAGATTTCGAAAAACTCTAAAGAAGAAGTTTGTTGAAGCACCAGAAATAGAAAAAGAAGTTAAGAGGCTACTCAGAGCTGATAATGAAGCTATCAGTTTCACTTGGGAAGTTATCAAAGAAGAAGATGAATCGAACAAGCCTGAACCAACCACATCAAAAAATACAAAACCTGAAAAAAAGTCAAAAACTAAACGAGGCTCTAAACGAGAATTAACATTGCATGCCACTAAACCAGAGTCATCAAACATTGTTGATATATTTGGAGGGGGTGTGAGCGATAGTGATTTTGAAGATGAAACTGTTAATGTTGATTTGCAAAACAGTCGTCTATCAGTTTGTGACAGTCGTCTTTCTGGCAATAGCACGAATCAAAGTTTGGGTGAATCACTAACTAAATCATCAGCCTTACCCATTGAGTTTGGATCTCATATGTTCCAATCATCCCAGGGAGTATCATCAACTTCTGATGCAAAGTGTGATCTCTCATCTGAAGATGATGGTGAATTTAGCAATGAAAAAGATGATATGGCTTTGAGAATTAATCAACTTAAATTGGAAGTGGATGAACTGAAACAACGCCGACAGAAGATCAAACTTGAAATTTCAGGAATAGAAAACTTAGCTCTACGTCAAAGATTTCAAGATAACCTACACACTCTCAATCAAGATATAATGTATAAAGAAATGGAATACCAGGGTCTTCTTACTCTGCAAAACTCTGAGGATATTTAA

Protein

MNKDKRELEYPAELESQFILKLPEHPAKILRELLKSGENLKNRLTIQIDNDMRRGEVRLDHWLMHAKIIDLPTIVESLKTIDGKSFYKTADICQMMICKDGPDQPIAEEEIPTKNKKKDPYKVDKKYLWPHGVTPPTKNVRKRRFRKTLKKKFVEAPEIEKEVKRLLRADNEAISFTWEVIKEEDESNKPEPTTSKNTKPEKKSKTKRGSKRELTLHATKPESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYKEMEYQGLLTLQNSEDI

Uniprot

H9ITR6   A0A2H1X1V2   A0A2A4JGW5   A0A2W1BVY1   A0A194QUD4   A0A194Q4Y8   + More
A0A1E1WBU4   A0A1E1WT79   S4PMS8   A0A212ENE8   A0A194R2R1   A0A212FDT1   A0A0L7KPL3   A0A194PGX2   A0A2J7R1T1   A0A1B6EID4   A0A1B6LC64   A0A1W4XHG3   D6WF61   A0A2A3E4Z5   A0A088A6F2   A0A151XC47   A0A2P8Y3Y0   F4X6V4   A0A158NFW7   E0VPI1   A0A3L8DL12   A0A195B2W4   E2BX26   A0A2J7R1S5   A0A195F1C1   A0A195CI57   A0A154PNM8   E9J663   A0A0M8ZSD6   A0A023ETI8   U5ESV5   A0A0J7NRW8   A0A182GHT8   A0A067R178   A0A0P4VVY4   R4FNG6   B0WP10   A0A1B6BZ07   E1ZYY7   A0A026WPP9   A0A336MW45   A0A336MRT0   A0A195E7Q0   A0A1L8DI89   A0A1B0D6A0   A0A1Y1JZN5   A0A1B6JFB1   A0A0A9Z2S3   A0A146M171   N6TJN2   A0A0K8T0F4   A0A0A9Z880   A0A0K8SZJ7   A0A0T6AXY7   A0A0K8TLX4   A0A0L7R8H4   A0A1Q3FBS3   A0A182HYG6   A0A182VEP5   A0A182TJ73   Q7Q8X9   A0A084WAJ4   A0A1S4H549   A0A182JQQ5   W5JPH0   A0A2M4AU20   A0A182LZ90   A0A182VT52   A0A182FTG3   A0A182WUX2   A0A1L8DGJ4   A0A1B0CR90   A0A2M4AUA0   A0A182NDD5   A0A182PUG9   A0A182RIU9   A0A034WDS1   K7JNJ1   A0A182YFA1   A0A182IV14   A0A182Q7F5   A0A0K8U386   A0A0A1WDY4   A0A1I8MCE4   E9GKY0   A0A1B0BY86   A0A0P5Y761   A0A0P5R374   A0A0P5S418   A0A0P5S0H4   A0A1A9WFM5   W8C1Q6   A0A0P5RRW2   A0A0P6D340  

Pubmed

19121390    28756777    26354079    23622113    22118469    26227816    + More
18362917    19820115    29403074    21719571    21347285    20566863    30249741    20798317    21282665    24945155    26483478    24845553    27129103    24508170    28004739    25401762    26823975    23537049    26369729    12364791    24438588    20920257    23761445    25348373    20075255    25244985    25830018    25315136    21292972    24495485   

EMBL

BABH01006912    ODYU01012810    SOQ59301.1    NWSH01001499    PCG71059.1    KZ149945    + More
PZC76806.1    KQ461108    KPJ09138.1    KQ459463    KPJ00603.1    GDQN01006600    JAT84454.1    GDQN01001018    JAT90036.1    GAIX01003400    JAA89160.1    AGBW02013671    OWR42999.1    KQ460845    KPJ12078.1    AGBW02008997    OWR51909.1    JTDY01007389    KOB65243.1    KQ459603    KPI92641.1    NEVH01008202    PNF34782.1    GECZ01032107    JAS37662.1    GEBQ01024539    GEBQ01018716    JAT15438.1    JAT21261.1    KQ971327    EFA00911.1    KZ288405    PBC26151.1    KQ982314    KYQ57919.1    PYGN01000956    PSN38949.1    GL888818    EGI57886.1    ADTU01014819    DS235366    EEB15287.1    QOIP01000006    RLU21107.1    KQ976662    KYM78539.1    GL451202    EFN79745.1    PNF34783.1    KQ981864    KYN34263.1    KQ977754    KYN00112.1    KQ434998    KZC13327.1    GL768221    EFZ11767.1    KQ435922    KOX68559.1    GAPW01001884    JAC11714.1    GANO01003073    JAB56798.1    LBMM01002177    KMQ95180.1    JXUM01064747    KQ562313    KXJ76165.1    KK852818    KDR15694.1    GDKW01000364    JAI56231.1    ACPB03000489    GAHY01001304    JAA76206.1    DS232018    EDS32037.1    GEDC01031049    JAS06249.1    GL435242    EFN73677.1    KK107135    EZA58032.1    UFQT01003306    SSX34834.1    UFQT01002304    SSX33172.1    KQ979568    KYN20872.1    GFDF01007997    JAV06087.1    AJVK01025851    GEZM01098826    JAV53731.1    GECU01009776    JAS97930.1    GBHO01004037    GBHO01004033    GBHO01004031    GBHO01004030    GDHC01014467    JAG39567.1    JAG39571.1    JAG39573.1    JAG39574.1    JAQ04162.1    GDHC01005634    JAQ12995.1    APGK01022613    KB740436    KB632373    ENN80659.1    ERL93776.1    GBRD01007146    JAG58675.1    GBHO01004036    GBHO01004035    GBHO01004034    GBHO01004032    GDHC01012281    JAG39568.1    JAG39569.1    JAG39570.1    JAG39572.1    JAQ06348.1    GBRD01007147    JAG58674.1    LJIG01022576    KRT79844.1    GDAI01002460    JAI15143.1    KQ414632    KOC67187.1    GFDL01010010    JAV25035.1    APCN01005907    AAAB01008933    EAA09978.4    ATLV01022200    KE525330    KFB47238.1    ADMH02000540    ETN66016.1    GGFK01010984    MBW44305.1    AXCM01000018    GFDF01008599    JAV05485.1    AJWK01024489    GGFK01011023    MBW44344.1    GAKP01006113    JAC52839.1    AXCN02001767    GDHF01031549    JAI20765.1    GBXI01017416    JAC96875.1    GL732550    EFX79758.1    JXJN01022510    GDIP01061964    LRGB01002190    JAM41751.1    KZS08641.1    GDIQ01106103    JAL45623.1    GDIQ01093345    JAL58381.1    GDIQ01098700    JAL53026.1    GAMC01003442    JAC03114.1    GDIQ01106102    JAL45624.1    GDIQ01083611    JAN11126.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000235965    UP000192223    UP000007266    UP000242457    UP000005203    UP000075809    UP000245037    UP000007755    UP000005205    UP000009046    UP000279307    UP000078540    UP000008237    UP000078541    UP000078542    UP000076502    UP000053105    UP000036403    UP000069940    UP000249989    UP000027135    UP000015103    UP000002320    UP000000311    UP000053097    UP000078492    UP000092462    UP000019118    UP000030742    UP000053825    UP000075840    UP000075903    UP000075902    UP000007062    UP000030765    UP000075881    UP000000673    UP000075883    UP000075920    UP000069272    UP000076407    UP000092461    UP000075884    UP000075885    UP000075900    UP000002358    UP000076408    UP000075880    UP000075886    UP000095301    UP000000305    UP000092460    UP000076858    UP000091820   

PRIDE

H9ITR6   

Pfam

PF04658   TAFII55_N        + More
PF11027   DUF2615
PF00733   Asn_synthase
PF13537   GATase_7

Interpro

IPR037817   TAF7        + More
IPR006751   TAFII55_prot_cons_reg       
IPR020309   Uncharacterised_CD034/YQF4       
IPR014729   Rossmann-like_a/b/a_fold       
IPR001962   Asn_synthase       
IPR029055   Ntn_hydrolases_N       
IPR017932   GATase_2_dom       

SUPFAM

SSF56235   SSF56235       

Gene 3D

3.40.50.620     3.60.20.10    

CDD

cd08047  TAF7
cd01991  Asn_Synthase_B_C

ProteinModelPortal

H9ITR6   A0A2H1X1V2   A0A2A4JGW5   A0A2W1BVY1   A0A194QUD4   A0A194Q4Y8   + More
A0A1E1WBU4   A0A1E1WT79   S4PMS8   A0A212ENE8   A0A194R2R1   A0A212FDT1   A0A0L7KPL3   A0A194PGX2   A0A2J7R1T1   A0A1B6EID4   A0A1B6LC64   A0A1W4XHG3   D6WF61   A0A2A3E4Z5   A0A088A6F2   A0A151XC47   A0A2P8Y3Y0   F4X6V4   A0A158NFW7   E0VPI1   A0A3L8DL12   A0A195B2W4   E2BX26   A0A2J7R1S5   A0A195F1C1   A0A195CI57   A0A154PNM8   E9J663   A0A0M8ZSD6   A0A023ETI8   U5ESV5   A0A0J7NRW8   A0A182GHT8   A0A067R178   A0A0P4VVY4   R4FNG6   B0WP10   A0A1B6BZ07   E1ZYY7   A0A026WPP9   A0A336MW45   A0A336MRT0   A0A195E7Q0   A0A1L8DI89   A0A1B0D6A0   A0A1Y1JZN5   A0A1B6JFB1   A0A0A9Z2S3   A0A146M171   N6TJN2   A0A0K8T0F4   A0A0A9Z880   A0A0K8SZJ7   A0A0T6AXY7   A0A0K8TLX4   A0A0L7R8H4   A0A1Q3FBS3   A0A182HYG6   A0A182VEP5   A0A182TJ73   Q7Q8X9   A0A084WAJ4   A0A1S4H549   A0A182JQQ5   W5JPH0   A0A2M4AU20   A0A182LZ90   A0A182VT52   A0A182FTG3   A0A182WUX2   A0A1L8DGJ4   A0A1B0CR90   A0A2M4AUA0   A0A182NDD5   A0A182PUG9   A0A182RIU9   A0A034WDS1   K7JNJ1   A0A182YFA1   A0A182IV14   A0A182Q7F5   A0A0K8U386   A0A0A1WDY4   A0A1I8MCE4   E9GKY0   A0A1B0BY86   A0A0P5Y761   A0A0P5R374   A0A0P5S418   A0A0P5S0H4   A0A1A9WFM5   W8C1Q6   A0A0P5RRW2   A0A0P6D340  

PDB

6MZM     E-value=4.7731e-30,     Score=327

KEGG

101745832    K03132 transcription initiation factor TFIID subunit 7 | (RefSeq) transcription initiation factor TF

PATHWAY

03022    Basal transcription factors - Bombyx mori (domestic silkworm)

GO

GO:0005669   GO:0006367   GO:0003743   GO:0051123   GO:0003713   GO:0008134   GO:0044212   GO:0006357   GO:0035035   GO:0016021   GO:0004066   GO:0006529   GO:0016020   GO:0004872   GO:0005216   GO:0006811   GO:0006810   GO:0009072   GO:0007169  

PANTHER

PTHR12228  

Length:

386

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00074

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.03360

outside

1  -  386

 

 

Pi

2.828994

Theta

3.105452

Tajima's D

-1.210771

CLR

0.004987

CSRT

0.0988450577471126

Interpretation

Uncertain