SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00223  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000572
Annotation
glycerol_kinase_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.085
 

Sequence

CDS
ATGAGCCAGTTCGGTAAATTTGGGCCTTTGGTAGGGGCAATTGATGAAGGCACATCTAGTGCGCGGTTTATTATATTCAAAGCTAATTCTTCCGATGTGGTTGCATACCATCAAAAAGAGTTAGAACAGCATTTTCCTCAAGAAGGTTGGGTGGAGCAAGATCCGTATGCAATATTGGCCGTAGTTAAAACGTGCATAGAAAAAGCAGTGGAGAATTTGGTGGCATTGGGGGGAAATCCAGAGGATATAATAGCAGTTGGAGTCACAAACCAAAGAGAAACAACTATAGTTTGGGAACAAGGCACAGGGAAACCTTTGTACAACGCAATTGTTTGGCTGGATATGAGAACATCTTCCACTATTGACAAGCTTCTTGACACGGTGCCAAACAAAACAAGAAACAAAAATTACCTAAAGCCATTATGTGGTCTTCCACTCTCACCTTACTTTAGTGCTGTTAAGCTGAGATGGCTTAGTGACAATGTTGATCCTGTAAAGAATGCCATGAAGAAGGGTACCTGTCGTTTTGGTACTGTTGATTGTTGGATCATATGGAACTTGACAGGTGGTCCAAATGGCGGGAAGCATGTCACTGATGTCACCAATGCATCGAGAACAATGTTAATGAATATTGAGAATTTGAATTGGGATCCACTGCTATTAAGGTTTTTCGAAGTGCCTAAGTCCGTCTTACCAGACATTAAATCCAGTTCAGAGGTTTACGGATACATTGCTGATGGTCCTCTCAAAGGTGTACCGATTGCCGGTTGCCTCGGAGACCAACAAGCCGCGTTAGTCGGACAGATGTGCCTCCAGAAAGGACAAGCAAAAGCCACGTACGGAACTGGTTGCTTTGTCCTTTATAATACAGGCGATATTCGAGTAAACTCGACAAGAGGTCTGCTTACCACAGTTGCTTACCAATTAGGTAGCAACAATCCCCCAAGCTACGCATTAGAAGGATCGGTAGCTGTTGCAGGTGCCGCATTAGGATGGCTAAAGGAGAATATTGGATTATTGGATACTGCTAAGGAATCGCAAACGATTGCAGAGACGGCAACAGAAAACGGTAGCGTTGTGTTTGTGCCCGCCTTTAGTGGACTATACGCGCCGTATTGGCGTCAAGATGCTAGAGGGTAA
Protein
MSQFGKFGPLVGAIDEGTSSARFIIFKANSSDVVAYHQKELEQHFPQEGWVEQDPYAILAVVKTCIEKAVENLVALGGNPEDIIAVGVTNQRETTIVWEQGTGKPLYNAIVWLDMRTSSTIDKLLDTVPNKTRNKNYLKPLCGLPLSPYFSAVKLRWLSDNVDPVKNAMKKGTCRFGTVDCWIIWNLTGGPNGGKHVTDVTNASRTMLMNIENLNWDPLLLRFFEVPKSVLPDIKSSSEVYGYIADGPLKGVPIAGCLGDQQAALVGQMCLQKGQAKATYGTGCFVLYNTGDIRVNSTRGLLTTVAYQLGSNNPPSYALEGSVAVAGAALGWLKENIGLLDTAKESQTIAETATENGSVVFVPAFSGLYAPYWRQDARG

Summary

Similarity
Belongs to the FGGY kinase family.
EMBL
AB164062    BAG09482.1    NWSH01001244    PCG71988.1    KZ149973    PZC75989.1    + More
AGBW02013811    OWR42769.1    KY565576    ATU31388.1    KQ461108    KPJ09152.1    KQ459463    KPJ00617.1    JXUM01014124    JXUM01014125    JXUM01014126    KQ560394    KXJ82644.1    JXUM01122182    JXUM01122183    KQ566576    KXJ70012.1    CH477317    EAT43737.1    JTDY01002385    KOB71529.1    GFDL01010554    JAV24491.1    ATLV01024542    KE525352    KFB51593.1    KQ971321    EEZ99510.1    GGFM01007596    MBW28347.1    ADMH02001849    ETN60880.1    GAMD01002725    JAA98865.1    GGFJ01004381    MBW53522.1    BT126799    KB632230    AEE61761.1    ERL90389.1    APGK01039324    KB740969    ENN76749.1    GGFK01009615    MBW42936.1    GFDF01001420    JAV12664.1    GALX01003985    JAB64481.1    GFDF01001418    JAV12666.1    GFDF01001419    JAV12665.1    AAAB01008807    EAA04716.4    APCN01003602    LJIG01009080    KRT83796.1    AXCN02000573    AXCM01000817    GANO01002259    JAB57612.1    AJWK01034704    NEVH01010479    PNF32446.1    DS231990    EDS30656.1    GEZM01055874    JAV72904.1    KQ434796    KZC05532.1    KK852595    KDR20628.1    KQ435834    KOX71603.1    GL434886    EFN74384.1    KQ414784    KOC61079.1    DS235812    EEB17443.1    QOIP01000004    RLU24272.1    KK107046    EZA61756.1    KQ414639    KOC66822.1    GL449017    EFN83485.1    GECL01003295    JAP02829.1    JRES01000501    KNC30687.1    GAKP01010027    JAC48925.1    GBBI01000881    JAC17831.1    GBHO01008446    GBRD01010731    JAG35158.1    JAG55093.1    GDKW01000624    JAI55971.1    ACPB03024614    GAHY01001865    JAA75645.1    GFTR01007147    JAW09279.1    GBHO01008447    GBRD01010732    JAG35157.1    JAG55092.1    KQ981928    KYN32877.1    KA646818    AFP61447.1    GDHF01025960    JAI26354.1    KQ977141    KYN05368.1    GL448516    EFN84470.1    GAPW01001271    JAC12327.1    KZ288232    PBC31489.1    NEVH01006731    PNF36815.1    KQ979709    KYN19482.1    GAMC01021013    GAMC01021012    GAMC01021011    GAMC01021010    JAB85543.1    LJIG01001339    KRT85601.1    PNF36814.1    KQ435922    KOX68683.1    KZ288210    PBC32971.1    KQ434874    KZC09636.1    GFWV01020928    MAA45656.1    GECU01009945    JAS97761.1    GBXI01007603    GBXI01006677    JAD06689.1    JAD07615.1    GGLE01002644    MBY06770.1    KQ982138    KYQ59607.1    KQ976986    KYN06580.1    GEZM01086446    JAV59429.1    GEZM01086442    JAV59434.1    GEZM01086445    JAV59430.1    GEBQ01024335    JAT15642.1    GBYB01005962    GBYB01005963    JAG75729.1    JAG75730.1    GL767121    EFZ14080.1   
Pfam
PF02782   FGGY_C        + More
PF00370   FGGY_N
Interpro
IPR018484   Carb_kinase_FGGY_N        + More
IPR018485   Carb_kinase_FGGY_C       
IPR005999   Glycerol_kin       
IPR018483   Carb_kinase_FGGY_CS       
IPR000577   Carb_kinase_FGGY       
IPR042018   GK1-3_metazoa       
PDB
2D4W     E-value=6.26479e-97,     Score=904

Ontologies

Topology

Length:
379
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07601
Exp number, first 60 AAs:
0.00179
Total prob of N-in:
0.00166
outside
1  -  379
 
 

Population Genetic Test Statistics

Pi
17.775826
Theta
16.322637
Tajima's D
-2.136592
CLR
0.387571
CSRT
0.00679966001699915
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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