Gene
KWMTBOMO00220
Pre Gene Modal
BGIBMGA000638
Annotation
PREDICTED:_homeobox_protein_araucan-like_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.608
Sequence
CDS
ATGTTCTCGTTGCTGGTCGGCAGCAGCGGGGCGGGCACCGGCGGCGCGGCTACTTCGCCGGACGGAGGCTCAAGCTCAGCCCCGCCTCTGTCTCCTGGGGGATCTGGTGTGGCCGGTGGCGCTCTGTCACCGGGCGCCGGCAGCCACGCCAGCACGCCAGCCGCCTCCTGCTGCGACACGCCCCGCCCTATCATCACAGACCCTGTCTCCGGACAGACGGTCTGTTCCTGTCAATACGACGGGGCGAGACTCGCGCTCACCTCATACCCGAGGCTATCGAGTGCCGCAGTCGGTGTCTACGGCACGCCATATCCCTCCACCGATCAAAATCCGTATCCCAGCATAGGCGTCGACAGTTCAGCCTTTTACTCGCCTTTGAGTAACCCTTACGCGCTGAAGGAGAGCGGCGGGGAGATGTCTGCGTGGACGTCGGCAGGCTTGCAGCCCTCCGGCGGCTACTACCCCTACGACCCGACGCTGGCGGCCTACGGATACGGAGCCGGTTACGATTTAGCTGCGAGACGGAAGAATGCTACTAGAGAATCGACAGCCACCCTTAAAGCGTGGCTCAACGAACACAAGAAGAACCCTTACCCCACGAAAGGGGAGAAAATTATGCTCGCTATCATAACTAAGATGACGCTGACACAAGTCTCGACGTGGTTCGCGAACGCACGCCGACGACTTAAAAAGGAAAACAAGATGACGTGGGAGCCAAAAAACAAGGCAGATGATGACGACGACACGATGCTCTCAGACGAGGAGAAGGACAAAGATGACCAAGACGATAAACTTAAATCCCACAAAGATGAGGAGCGGAAAGGGGACGAGATGCTGCAAGGGATGCACCATCAGCTGCTGAGCTACGGAATAAAGGAAGAATCTAAAAGAACTTCAGACTGTGGGGTGCCGATTCCGGCTTCCAAACCGAAAATATGGTCGCTGGCAGACACCGCAGCCTGCAAAACGCCTCCTCCCGCCGCGCAGCCGTGGCCTCAACACTCATACGGACCTCCCGAGAGAGCAGCACCAATTGACGGTAGCTCGAACGGATTTGCGTTACCTGCAACCGCCGCGGCAAGTCCTGCAAGCGGGTCTTACGGTCGCTACGGAGGATTTCCTGGTAGCCAGTACAGTGGACAACACCCATGCGTGCATCCGGCAGCTTTTCCTGATGTGCAAACAGATACGCCACCGCAAACACCACCTAATATGAAAGTTCCGAGTGTGGCGAATCCCCTGGGTAGCGGCGGAGGCTCGGGCTACTGCTTTCCTCGACACCAACAGTCACCTCAGCGCGACCCGTATCACAATCCACACCACGCGCCGACCAACCATCAGCCTAATCAACCTCACCACAACGAAGGCTCTGCGGCCTTCAAACCCTTCTATAAAAGTTCCATTCACCATCCCAACGGTTTCGCGTCGGCCGTCTGA
Protein
MFSLLVGSSGAGTGGAATSPDGGSSSAPPLSPGGSGVAGGALSPGAGSHASTPAASCCDTPRPIITDPVSGQTVCSCQYDGARLALTSYPRLSSAAVGVYGTPYPSTDQNPYPSIGVDSSAFYSPLSNPYALKESGGEMSAWTSAGLQPSGGYYPYDPTLAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKADDDDDTMLSDEEKDKDDQDDKLKSHKDEERKGDEMLQGMHHQLLSYGIKEESKRTSDCGVPIPASKPKIWSLADTAACKTPPPAAQPWPQHSYGPPERAAPIDGSSNGFALPATAAASPASGSYGRYGGFPGSQYSGQHPCVHPAAFPDVQTDTPPQTPPNMKVPSVANPLGSGGGSGYCFPRHQQSPQRDPYHNPHHAPTNHQPNQPHHNEGSAAFKPFYKSSIHHPNGFASAV
Summary
Uniprot
EMBL
Proteomes
Pfam
PF05920 Homeobox_KN
Interpro
SUPFAM
SSF46689
SSF46689
ProteinModelPortal
PDB
6FQP
E-value=4.38663e-08,
Score=139
Ontologies
GO
Topology
Subcellular location
Nucleus
Length:
478
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11356
Exp number, first 60 AAs:
0.00192
Total prob of N-in:
0.00047
outside
1 - 478
Population Genetic Test Statistics
Pi
16.563175
Theta
4.495003
Tajima's D
-2.016303
CLR
0.158625
CSRT
0.00919954002299885
Interpretation
Uncertain
