Gene

KWMTBOMO00219

Pre Gene Modal

BGIBMGA000573

Annotation

PREDICTED:_protein_SMY2-like_[Bombyx_mori]

Location

Bomo_Chr1(-):7012303-7020984      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.108

CDS

ATGTCTGCTCCAACCGAGTTAAGTTTCGATGAAATACTTAAGTTTATGTTAGCACACAATGGTAAAGTTACAAACCACGAATTAGTGAAGCATTTCAAAGTTTTTCTTATGAATCCTGAGATGAGAGACGAAGCAAGAAGTACTTTCAAAAAGAACGTTAATGCACTCGCTATAATAAAAACTCAAAACAATGAGAAATGGCTCATACTCAAAAAGAAGTATATGCCAAATAACGGTAAAGATATGGAAGAGGTCAGTGAGACTAAAGCTGAGTCACCACACGTGGGATCTCTTGACACGCAATTAGAGTCTGATCCCCCACCACCTCCAAGGCCGCCGTTACCAGTTCAACTTAATCAGGATTTCAGTTTATTGACTAATCTTATACAAGATACTCAGTGTAATCCAATAAGCGAAACCCAAGAAAGTCTTGCTTCAGCACAAAGTGAAGATGTACCACCAAAAGTCCATCCGAGAAGAAGATCTTCAGAAAAAAACTTGGAAAAACTGTCAAGCCCACAGACACAGTCTCACCGTACCTCTATACCGAACAATGAAAGTGTTGAGATATCTGAGACCTCACAATCTACTTTGACTTCATCAAGAAGTGAGAGCATGCTGGTAGACAATGAGCACAAGATCTCAGTGAAGGAAAGAAAGCAAATGTTCAATCGAATGGCCTCAGAAAGTGATGTCTTGAAATCAAATAAAATTGGTACAAGCTTCAGCACAATGGGTACCGACGAGGAAGACAGGATTTCGAAAAGTGAGACAGATCCTTTGGATTCCAAACAAAAGCAATGGATATTGTGTGCCGCGAGAGGCGAGTATCACGCTCTTGCTAAAATGTGCAAAGAAAATGTAAAACTTGTGAAGACCAAGGTACGTTGA

Protein

MSAPTELSFDEILKFMLAHNGKVTNHELVKHFKVFLMNPEMRDEARSTFKKNVNALAIIKTQNNEKWLILKKKYMPNNGKDMEEVSETKAESPHVGSLDTQLESDPPPPPRPPLPVQLNQDFSLLTNLIQDTQCNPISETQESLASAQSEDVPPKVHPRRRSSEKNLEKLSSPQTQSHRTSIPNNESVEISETSQSTLTSSRSESMLVDNEHKISVKERKQMFNRMASESDVLKSNKIGTSFSTMGTDEEDRISKSETDPLDSKQKQWILCAARGEYHALAKMCKENVKLVKTKVR

Uniprot

H9ITJ3   A0A2A4J7S8   A0A212EMN0   A0A194QV15   A0A2H1VBP1   A0A2W1BQR9   + More
A0A194PTZ5   A0A0L7L997   A0A3L8DBS8   A0A1B6MB22   A0A1B6LXW9   A0A310SL44   A0A0L7QZV3   A0A154P8Y6   A0A088ATZ8   A0A2H8TQE3   A0A1B6K574   A0A1B6J1L4   A0A1B6I7L0   A0A2S2QE46   A0A1I8PM51   A0A2M4AEN8   A0A1I8Q934   A0A2M4ACF1   A0A2R5L4Y6   A0A0A1XA40   A0A026W305   A0A0K8VSV3   A0A0K8V925   A0A0K8WF74   A0A3B0KIZ6   A0A1L8DL98  

Pubmed

19121390    22118469    26354079    28756777    26227816    30249741    + More
25830018    24508170   

EMBL

BABH01006823    NWSH01002669    PCG67718.1    AGBW02013811    OWR42760.1    KQ461108    + More
KPJ09159.1    ODYU01001679    SOQ38237.1    KZ149973    PZC75994.1    KQ459594    KPI96229.1    JTDY01002180    KOB71934.1    QOIP01000010    RLU17573.1    GEBQ01006860    JAT33117.1    GEBQ01011523    JAT28454.1    KQ762864    OAD55391.1    KQ414676    KOC64092.1    KQ434846    KZC08301.1    GFXV01004047    MBW15852.1    GECU01001104    JAT06603.1    GECU01014696    JAS93010.1    GECU01024807    JAS82899.1    GGMS01006811    MBY76014.1    GGFK01005928    MBW39249.1    GGFK01005154    MBW38475.1    GGLE01000448    MBY04574.1    GBXI01006128    JAD08164.1    KK107455    EZA50460.1    GDHF01010669    JAI41645.1    GDHF01016860    JAI35454.1    GDHF01002799    JAI49515.1    OUUW01000009    SPP85061.1    GFDF01006964    JAV07120.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000279307    UP000053825    UP000076502    UP000005203    UP000095300    UP000053097    UP000268350   

PRIDE

H9ITJ3   

Pfam

PF12796   Ank_2

Interpro

IPR002110   Ankyrin_rpt        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       

SUPFAM

SSF48403   SSF48403       

Gene 3D

1.25.40.20    

CDD

cd00204  ANK

ProteinModelPortal

H9ITJ3   A0A2A4J7S8   A0A212EMN0   A0A194QV15   A0A2H1VBP1   A0A2W1BQR9   + More
A0A194PTZ5   A0A0L7L997   A0A3L8DBS8   A0A1B6MB22   A0A1B6LXW9   A0A310SL44   A0A0L7QZV3   A0A154P8Y6   A0A088ATZ8   A0A2H8TQE3   A0A1B6K574   A0A1B6J1L4   A0A1B6I7L0   A0A2S2QE46   A0A1I8PM51   A0A2M4AEN8   A0A1I8Q934   A0A2M4ACF1   A0A2R5L4Y6   A0A0A1XA40   A0A026W305   A0A0K8VSV3   A0A0K8V925   A0A0K8WF74   A0A3B0KIZ6   A0A1L8DL98  

KEGG

101740297    no KO assigned | (RefSeq) protein SMY2-like

GO

GO:0000502  

Length:

296

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00015

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.01093

outside

1  -  296

 

 

Pi

16.063558

Theta

20.785491

Tajima's D

0.457877

CLR

0.007658

CSRT

0.510174491275436

Interpretation

Uncertain