Silkworm Genome Informatics Database

Gene

KWMTBOMO00212

Annotation

PREDICTED:_uncharacterized_protein_LOC105842162_[Bombyx_mori]

Location

Bomo_Chr1(-):6650913-6770380 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.22

CDS

ATGCCAATCATCCAGTCGTGTTGCTGCTGGCGAAGCCTCCGCCGAGGTTGCTATGCTGCCGCTATATATACTATGATATACTTCTCCATCACGATAGTCACAATGGGACATTTTATAGACATGGAACAGAGATACCTCAACGGCGACCTGATGGAACCAGAATCTGAGAGTTTCCTGGAACCGGATAAGATAACACCGATTACCGTGTCACTGAACATAACGCTGTTGGCCTGCAGCACGATGGGGCTCATCTCATGCGTGATGCTAATATTGGGAGTGTATAAGGACCTCAAGTTTATGCTTCTCCCGTGGATCCTATCAATGGGCCTGGAAACACTCGTTGAAGTTATCAATGTGGTGTATCTCTTCTACCTTCAAACAATGGACTTTAATCCAATAACGTCGTTTCTCTTCACACTCGACTTCTTCATCATCGTGCTCAATCTGTACGCCATGGTTTGTGTCATTTCGCAATTTCAAGAGTACCTCGAGGGAAGAGGCACCGCTACCTACGACTATAACGACAGGATGGCTACCGTGCAGTACACGGCCACCAATCAGCAAACAACGACCACTAGCTCCGCGCCTAGTGGCCGTCGACGCTCCGCCGGAAGACCTACCCCAAGCCGATGTGACCCTGAAGAATTCTCCGAGGCTCCCACTAAAACCATAACGTCTGTGTTATCCAAACCAAGTCGATCAGCTGTGAAGAAACATGTTCAGTTTCCGGACGAACAGAGCTGCATTGAAGAGGCTAATGAACCCATTGCCGAGGAAGAAACTGTTGCTGAGGAAAAACCAGATACCCGGGTGATCAGTTCGCTTTGGATGGAGCTCGAGACGGCTACTCCGGTGCCGGAACGCTGA

Protein

MPIIQSCCCWRSLRRGCYAAAIYTMIYFSITIVTMGHFIDMEQRYLNGDLMEPESESFLEPDKITPITVSLNITLLACSTMGLISCVMLILGVYKDLKFMLLPWILSMGLETLVEVINVVYLFYLQTMDFNPITSFLFTLDFFIIVLNLYAMVCVISQFQEYLEGRGTATYDYNDRMATVQYTATNQQTTTTSSAPSGRRRSAGRPTPSRCDPEEFSEAPTKTITSVLSKPSRSAVKKHVQFPDEQSCIEEANEPIAEEETVAEEKPDTRVISSLWMELETATPVPER

Uniprot

A0A212FM96 A0A194QUM2 A0A194PS00 A0A0C9QQM3 A0A2S2PH28 A0A2S2Q7R2 + More
A0A1B6E486 A0A154P8U9 A0A151WLM9 A0A151IXN7 A0A087ZQM9 A0A195FNW0 A0A158P497 A0A195CTY5 E2B9N7 A0A3L8E1T3 A0A232FF49 F4WIU9 A0A195B4Q4

Pubmed

22118469 26354079 21347285 20798317 30249741 28648823 + More
21719571

EMBL

AGBW02007654 OWR54863.1 KQ461108 KPJ09167.1 KQ459594 KPI96221.1 + More
GBYB01002957 JAG72724.1 GGMR01015889 MBY28508.1 GGMS01004572 MBY73775.1 GEDC01004574 JAS32724.1 KQ434846 KZC08292.1 KQ982959 KYQ48691.1 KQ980796 KYN12997.1 KQ981382 KYN42245.1 ADTU01008755 ADTU01008756 ADTU01008757 KQ977279 KYN04153.1 GL446584 EFN87571.1 QOIP01000001 RLU26549.1 RLU26674.1 NNAY01000296 OXU29384.1 GL888177 EGI65895.1 KQ976618 KYM79169.1

Proteomes

UP000007151 UP000053240 UP000053268 UP000076502 UP000075809 UP000078492 + More
UP000005203 UP000078541 UP000005205 UP000078542 UP000008237 UP000279307 UP000215335 UP000007755 UP000078540

Pfam

PF15860 DUF4728

Interpro

IPR031720 DUF4728

ProteinModelPortal

A0A212FM96 A0A194QUM2 A0A194PS00 A0A0C9QQM3 A0A2S2PH28 A0A2S2Q7R2 + More
A0A1B6E486 A0A154P8U9 A0A151WLM9 A0A151IXN7 A0A087ZQM9 A0A195FNW0 A0A158P497 A0A195CTY5 E2B9N7 A0A3L8E1T3 A0A232FF49 F4WIU9 A0A195B4Q4

KEGG

105842162 no KO assigned | (RefSeq) uncharacterized LOC105842162

GO

GO:0016021

Length:

288

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

89.68352

Exp number, first 60 AAs:

21.96896

Total prob of N-in:

0.99515

POSSIBLE N-term signal

sequence

inside

1 - 16

TMhelix

17 - 39

outside

40 - 70

TMhelix

71 - 93

inside

94 - 99

TMhelix

100 - 122

outside

123 - 136

TMhelix

137 - 159

inside

160 - 288

Pi

21.508712

Theta

19.418244

Tajima's D

-1.889854

CLR

0.050373

CSRT

0.0207489625518724

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics