SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00210  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000581
Annotation
uncharacterized_protein_LOC101744278_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.841
 

Sequence

CDS
ATGGATGAAGAAGGCGAAAGCATTTTACTTGAAGATAATTATTATCAGCTTCTAAATGTATCAAAGACGGCTTCTTTAGAAGAAATCAATAGTGCATATCGTCGTTTCTCTCGAATGTTTCATCCAGACAAACATAGCACAGATCCCAACAAACAAAAATGGGCTGAGCAGATATTCAACAAAGTGAAAGAGGCTTATGAAGTTTTATCTGATTCACACAAAAGGGCCATATATGATACACTAGGAAAACGAGGTTTAGAAGTAGATGGTTGGGAGGTTATTTTCCGCACACGCACTCCTAGGGAAATAAGAGAAGAATATGAGAGGTTAAAACGGGAACGTGAGGAACGTAGGCTCCAGCAGAGTGCCAACCCTCGTGGCACAATCACACTCTCCATCAATGCCACAGATATGTTTACAAAGTATTATGATGAATATGAAATAATGGAAGAAACTACAGTGATCCCTAACATTGAAGTGTCAGGAATGACAATTCAACAATCCATTGATGCTCCAGTAACACTTCGAAATACAATGACTCTGTCAGGAAACATATCAACTCAGAATGGAATAGGTACTGGTTCAATAAATATGTGTAACAGGCACCTTAGCTCAGAAAAAGGCTGGACAGAAGTTGAATGTGGAATAGGAAATGGTCCTTTACTAGGTGTAAAATTATTTCGTACATTGTCTAGACTTATGTTTCTAAATTGTGGCACAGTGTTACAGTTTACATCAAGAGGAATTTCACCTAGCTTTGTTTCTACATTAGCTCTTCAGTTAGATGCTCACTCAGTGGGTTATTTGACATACCGAGCTGGAAACCAAGGCTCTTCAATGACTTCAATCTATGTGAGGGACTCGGAGAAATATCACAGCAACACTGCAATCCAGATTGGCAATCCGCATTCATTTATATCTTTCAATGTGATGAGGAAATTGCCCCAACATGATTTGAAGCTGAGACTGGCTGTAAAATTTGGGACATTTGGTGCAATAGCTGAGTATGGTGCGGAAAAGAAAGTGTCACAAAACAGTAGTGTGTCAGCTGCAGTTATGTTGGGTGTTCCTAGCGGGGTTATGCTCAAACTCAAGTGGACATGTTCATCACAAACTATAGTAGTGCCAATCCATCTGTGTGAGGAAGTGATGCCGTCACCAGTTTTCTACGCAACTGTAGTTCCATTAGTATCATGGATGATATTAAAAAAAATCGTTCTGGATCCTATTGCAAGAGAGCGTCAGGAACGAGAGAGACAACGTTCTATGGAAGCTAATTTTGAAAGATTACAGGAGATGCAAAGACAAGCACGCGCTACTGTAGAACTGATGAGAGAAACTTATTCCAGAATTCGGTCCCACGAAGATAAGAAGAAAGGTCTCGTCATATTAAAAGCTCTATACGGAAAGCTACCGGCAGATACATCGAGCCACGTGATACCCGAACAGACAGGAGACGGTGTATCTCCCGAATCGCCGAGTCCTTACAGCGATGTCATCGACGTCACAATACCCGTACAATGTTTGGTCAAAGATTCAAGGCTTGAACTTCTCGAGGCAAGCAAGTCGGAACTACCAGGCTTCTATGACCCGTGCGTTGGCGAGGACAAGCACTTGACAGTACAGTACATGTTTCACAATAATTTGCACTGCTGCACCGTACCTGACAATCAGGCCATCGTTCTGCCTCGCAACAATCATCGGATAAAGAATAGATCCTGA
Protein
MDEEGESILLEDNYYQLLNVSKTASLEEINSAYRRFSRMFHPDKHSTDPNKQKWAEQIFNKVKEAYEVLSDSHKRAIYDTLGKRGLEVDGWEVIFRTRTPREIREEYERLKREREERRLQQSANPRGTITLSINATDMFTKYYDEYEIMEETTVIPNIEVSGMTIQQSIDAPVTLRNTMTLSGNISTQNGIGTGSINMCNRHLSSEKGWTEVECGIGNGPLLGVKLFRTLSRLMFLNCGTVLQFTSRGISPSFVSTLALQLDAHSVGYLTYRAGNQGSSMTSIYVRDSEKYHSNTAIQIGNPHSFISFNVMRKLPQHDLKLRLAVKFGTFGAIAEYGAEKKVSQNSSVSAAVMLGVPSGVMLKLKWTCSSQTIVVPIHLCEEVMPSPVFYATVVPLVSWMILKKIVLDPIARERQERERQRSMEANFERLQEMQRQARATVELMRETYSRIRSHEDKKKGLVILKALYGKLPADTSSHVIPEQTGDGVSPESPSPYSDVIDVTIPVQCLVKDSRLELLEASKSELPGFYDPCVGEDKHLTVQYMFHNNLHCCTVPDNQAIVLPRNNHRIKNRS

Summary

EMBL
JN872892    AFC01231.1    NWSH01000187    PCG78634.1    KQ459594    KPI96217.1    + More
KQ461108    KPJ09171.1    ODYU01000482    SOQ35342.1    AGBW02007654    OWR54867.1    ADTU01018770    KQ978881    KYN27745.1    KK852665    KDR18967.1    KQ981693    KYN37704.1    GL887908    EGI69515.1    KQ978323    KYM95123.1    GL438838    EFN68171.1    KK107148    QOIP01000009    EZA57398.1    RLU18320.1    NEVH01024949    PNF16475.1    KQ976588    KYM79697.1    GL762137    EFZ21995.1    PNF16476.1    KQ982762    KYQ51021.1    GEDC01017492    JAS19806.1    GECL01003574    JAP02550.1    GFTR01007204    JAW09222.1    GDKW01000331    JAI56264.1    ACPB03000856    GBGD01001004    JAC87885.1    GDAI01002776    JAI14827.1    JXUM01075431    JXUM01075432    JXUM01075433    KQ562886    KXJ74917.1    CH477538    EAT39324.1    KQ971343    EFA04019.2    KQ434868    KZC09223.1    KZ288266    PBC30134.1    LJIG01016002    KRT81908.1    GBRD01002429    GDHC01000257    JAG63392.1    JAQ18372.1    GFDL01010459    JAV24586.1    GBHO01008580    JAG35024.1    DS232111    EDS35097.1    NNAY01000900    OXU26015.1    KQ773953    OAD52344.1    APCN01005160    AAAB01008849    LBMM01006080    KMQ90951.1    GANO01001492    JAB58379.1    GL452776    EFN76747.1    KK854357    PTY15046.1    EAA07236.4    APGK01051809    APGK01051810    KB741207    ENN72879.1    KQ414756    KOC61671.1    UFQT01001098    SSX28900.1    ATLV01018848    KE525251    KFB43376.1    GGFK01007637    MBW40958.1    ADMH02002126    ETN58639.1    GGFJ01003865    MBW53006.1    AXCN02001753    KQ435760    KOX75607.1    GEZM01088910    JAV57836.1    GFDF01004087    JAV09997.1    GBYB01002419    JAG72186.1    GDHF01006489    JAI45825.1    GAKP01002363    JAC56589.1    GDIP01238280    JAI85121.1    GBYB01002417    JAG72184.1    GBYB01002416    JAG72183.1    GDIQ01010712    LRGB01002860    JAN84025.1    KZS05849.1    GBBM01000772    JAC34646.1    GDIP01094601    JAM09114.1    GDIP01189479    JAJ33923.1    GEFH01004096    JAP64485.1    GDIP01180130    JAJ43272.1    CH902619    EDV37531.1    KPU76892.1    MWRG01003124    PRD31873.1    GEFM01003433    JAP72363.1    GEDV01008040    JAP80517.1    GACK01007652    JAA57382.1    GFPF01007352    MAA18498.1    GFAC01003544    JAT95644.1    CH954179    EDV56056.1    GL732538    EFX83114.1    JRES01000644    KNC29667.1    GAMC01001514    JAC05042.1    GDIP01152292    JAJ71110.1   
Pfam
PF11875   DUF3395        + More
PF00226   DnaJ
PF01251   Ribosomal_S7e
Interpro
IPR018253   DnaJ_domain_CS        + More
IPR024586   DnaJ-like_C11_C       
IPR036869   J_dom_sf       
IPR001623   DnaJ_domain       
IPR000554   Ribosomal_S7e       
SUPFAM
SSF46565   SSF46565       
Gene 3D
PDB
2LGW     E-value=3.36317e-15,     Score=201

Ontologies

Topology

Length:
573
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.44775
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00036
outside
1  -  573
 
 

Population Genetic Test Statistics

Pi
1.802154
Theta
21.779138
Tajima's D
-2.401013
CLR
0.149551
CSRT
0.00134993250337483
Interpretation
Uncertain
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