Gene

KWMTBOMO00208

Pre Gene Modal

BGIBMGA000583

Annotation

PREDICTED:_peptidoglycan-recognition_protein_1-like_isoform_X2_[Papilio_machaon]

Location

Bomo_Chr1(-):6434379-6446320      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.625

CDS

ATGCCTAGACGGGGCGTACATACAGAGAGCGGTCCCAGCACAACTGCAGATGTCATCATGTTGAATGACAGAAATGTAGCAACTGTGTCGGGAGACGTCGCGTCGATTCAAACTTCACAATTTAATGCAACCGAAGGCCCTCGAGATGTTGAAACCAATGCTTCGAACGCACAAAAATCCGAAAAAGACAAAGATATACCGTTTTCGCGCTACCTGCGAAAAGTAGTGAAGACATCGAGCAGGGTGATTAGAGCGTTGTCTATAGCTGCGTTCGTAATACTTTTAACAGTCGTCGCCTTCATGCTGTATTTCACGATCATGGCTAACTTTTCCTCCGAAGACGGCGACCGTACCGCTCCTCACGAGTGGGATATTTCAAGGGTGTTGTGGCAAGCCAGATGGGCCAACAATACGCAGCGCACAACAGCTTTCGATCCTATACGACTGGTCATTATCCAGCACACCGTCACACCAGACTGTTTCACATTCGTCGCTTGCGTGGCGGCATTACGTAATCTCCAGAGCTACTTCTTGATAAACTTACATTATGACATACCCTACAATTTCATGATTGGAAATGACGGCAGAGTGTACGAAGGACGCGGCTGGGGCATGGTCGGTGCCCATACCTTCATGTATAACAGATGTACACTGGGCCTAGGATTTGTAGGAAACTACGACAGACACACACAAGTTTCAAAGCTGCAAATCGAAAGAATGAAATTGTTACTCGAAAAAGGCGTAAGAGAAGGCTTTCTGGATCCTAACTACCACATAGTCGCCGCTAGTGATATACAAAACACAGACAGTCCCGGATCGAATCTATACAAGGCCTTGAAAGAATTGGATCATTTCGAACACACTGATCGCTTCAGGAACGTCGACTGTGAAGTTACCTACGGAATGGTATCTTAA

Protein

MPRRGVHTESGPSTTADVIMLNDRNVATVSGDVASIQTSQFNATEGPRDVETNASNAQKSEKDKDIPFSRYLRKVVKTSSRVIRALSIAAFVILLTVVAFMLYFTIMANFSSEDGDRTAPHEWDISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHYDIPYNFMIGNDGRVYEGRGWGMVGAHTFMYNRCTLGLGFVGNYDRHTQVSKLQIERMKLLLEKGVREGFLDPNYHIVAASDIQNTDSPGSNLYKALKELDHFEHTDRFRNVDCEVTYGMVS

Uniprot

H9ITK3   A0A142I1V3   A0A194PTB5   H9ITK6   A0A194QV31   A0A2A4K4P1   + More
A0A2W1BPG7   A0A1E1W7N6   A0A212FME6   A0A0A7DQF0   A0A1E1WHF8   A0A1E1W8A1   A0A0L7KSP7   A0A0Q9XCT0   A0A1Y9GZ02   A0A0Q9XCG5   A0A0Q9WUD5   A0A0Q9WW31   D8WN09   A0A182P8R2   A7UTA2   A0A3F2YV06   D8WN08   Q7Q9J6   A0A2Y9D0K5   A0A182XEW7   A0A3F2YV02   A0A182V5I3   A0A224XGV6   A0A1B6C2E8  

Pubmed

19121390    26354079    28756777    22118469    26227816    17994087    + More
12364791    14747013    17210077   

EMBL

BABH01006776    BABH01006777    BABH01006778    KT907183    AMR36560.1    KQ459594    + More
KPI96213.1    BABH01006771    BABH01006772    KQ461108    KPJ09174.1    NWSH01000187    PCG78632.1    KZ150006    PZC75207.1    GDQN01008085    JAT82969.1    AGBW02007654    OWR54870.1    KF960045    AIW49872.1    GDQN01004611    JAT86443.1    GDQN01007870    JAT83184.1    JTDY01006104    KOB66282.1    CH933809    KRG06173.1    KRG06172.1    CH940647    KRF84516.1    KRF84512.1    GU214233    ADI39641.1    AAAB01008900    EDO64109.1    AXCM01001476    GU214232    ADI39640.1    EAA09419.4    APCN01002820    GFTR01004711    JAW11715.1    GEDC01030415    GEDC01029869    JAS06883.1    JAS07429.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000037510    + More
UP000009192    UP000075884    UP000008792    UP000075885    UP000007062    UP000075883    UP000075840    UP000076407    UP000075903   

PRIDE

H9ITK3    H9ITK6   

Pfam

PF01510   Amidase_2

Interpro

IPR036505   Amidase/PGRP_sf        + More
IPR015510   PGRP       
IPR006619   PGRP_domain_met/bac       
IPR002502   Amidase_domain       

SUPFAM

SSF55846   SSF55846       

Gene 3D

3.40.80.10    

CDD

cd06583  PGRP

ProteinModelPortal

H9ITK3   A0A142I1V3   A0A194PTB5   H9ITK6   A0A194QV31   A0A2A4K4P1   + More
A0A2W1BPG7   A0A1E1W7N6   A0A212FME6   A0A0A7DQF0   A0A1E1WHF8   A0A1E1W8A1   A0A0L7KSP7   A0A0Q9XCT0   A0A1Y9GZ02   A0A0Q9XCG5   A0A0Q9WUD5   A0A0Q9WW31   D8WN09   A0A182P8R2   A7UTA2   A0A3F2YV06   D8WN08   Q7Q9J6   A0A2Y9D0K5   A0A182XEW7   A0A3F2YV02   A0A182V5I3   A0A224XGV6   A0A1B6C2E8  

PDB

1SXR     E-value=6.75923e-29,     Score=316

KEGG

101743847    K01446 peptidoglycan recognition protein | (RefSeq) peptidoglycan-recognition protein 2-like

GO

GO:0009253   GO:0008270   GO:0008745   GO:0016021   GO:0005615   GO:0016019   GO:0019730   GO:0032827   GO:0050830   GO:0042834   GO:0005524   GO:0005622   GO:0030145   GO:0006508   GO:0007169  

PANTHER

PTHR11022  

Length:

304

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

27.65312

Exp number, first 60 AAs:

0

Total prob of N-in:

0.99082

inside

1  -  81

TMhelix

82  -  104

outside

105  -  304

 

 

Pi

1.292052

Theta

2.264142

Tajima's D

-1.897329

CLR

0.052314

CSRT

0.0151992400379981

Interpretation

Uncertain