Silkworm Genome Informatics Database

Gene

KWMTBOMO00207

Pre Gene Modal

BGIBMGA000584

Annotation

PREDICTED:_uncharacterized_protein_LOC101739885_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr1(-):6424425-6425490 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.231

CDS

ATGAAGAGTGATGGTGATGAAAATCCTAAACACGAGACGAAAAGCCCGCCTCCTATCAGCTCTGACGTAGCTGTAGTGGACGACAGAATAATGGCAGTTGCAACGCAAGCTGCGAGTTCGACGCCTATATCACAACTCAATGTAACAAAGTCGTCACGGGTCCATATCGGACCCAAGTTCATATCAGTAACTCAAACCGTCAGGAATACAGAAGAAATCAAAGGTAAGGCTAGTCGAAAATCGATTTAA

Protein

MKSDGDENPKHETKSPPPISSDVAVVDDRIMAVATQAASSTPISQLNVTKSSRVHIGPKFISVTQTVRNTEEIKGKASRKSI

Uniprot

H9ITK4 H9ITK5 A0A194QV31 A0A2W1BRA0 A0A194PTY1 A0A212FME6 + More
A0A1E1W7N6

Pubmed

19121390 26354079 28756777 22118469

EMBL

BABH01006774 BABH01006775 BABH01006776 BABH01006772 BABH01006773 KQ461108 + More
KPJ09174.1 KZ150006 PZC75206.1 KQ459594 KPI96214.1 AGBW02007654 OWR54870.1 GDQN01008085 JAT82969.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000007151

PRIDE

H9ITK4 H9ITK5

Pfam

PF01510 Amidase_2

Interpro

IPR036505   Amidase/PGRP_sf        + More
IPR015510   PGRP
IPR002502   Amidase_domain
IPR006619   PGRP_domain_met/bac

SUPFAM

SSF55846 SSF55846

Gene 3D

3.40.80.10

CDD

cd06583 PGRP

ProteinModelPortal

H9ITK4 H9ITK5 A0A194QV31 A0A2W1BRA0 A0A194PTY1 A0A212FME6 + More
A0A1E1W7N6

KEGG

101739885 K01446 peptidoglycan recognition protein | (RefSeq) peptidoglycan-recognition protein SC2-like

GO

GO:0009253 GO:0008745 GO:0008270 GO:0016021

PANTHER

PTHR11022

Length:

82

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00547

Exp number, first 60 AAs:

0.00547

Total prob of N-in:

0.43823

outside

1 - 82

Pi

0.06711

Theta

1.0492

Tajima's D

-1.860958

CLR

0.031018

CSRT

0

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree