Gene

KWMTBOMO00204

Pre Gene Modal

BGIBMGA000586

Annotation

PREDICTED:_peptidoglycan-recognition_protein_1-like_isoform_X2_[Papilio_machaon]

Location

Bomo_Chr1(-):6367352-6386570      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.202 PlasmaMembrane   Reliability : 1.243

CDS

ATGTGGAGCGATAGTGACGGAGAACGTGAACTTGCGATGATGTACCGTCCGGACTGCAGTTCTGACTTCGTTTTGATGGACGAACGAATGATAGCATCAGCTTCACGTGCAGCAGTTTCGCCGCCTATATCACAGCTTAACGTGTCCAAATCATCGAGGGTCCACATCGGGCCCAAGTTCGTATCGGTCACACAAAAAGTCAGGAATACAGAAGAAATAAAAGAACTCCCGCTGCCGCGTTACCTATGGAAAGTTTTGAAGAATACAAGCAGAGCAGAGAGACTATCGTGCTCCGTAGCGCTCACCGCTCTTGTCATATGCATCGGGCTAACTTTGTACTTCGCTTTGACAACCGAGACAGTCGCAAACGATGATGACATCGATGTCGCTCCTCATGAATGGAACATCACAAGGGAGATGTGGTTGGCTCAAATTGTAAACGACACGGAATCAGTCAGAGAATATAACCCGATTCGTCTGGTCATCGTTCAGCATACGGTCAGCCCTGAATGCGACACCTTCCAAACATGTGCGTCGCAAATGCGTATTCTTCAATCCAATGTCTTAAACAATCTTGAAGATGACATTCCTTACAACTTTTTGATCGGCAACGATGGCAGAGTGTACGAAGGACGAGGTTGGGGACTTGTGGGAGCACATACGTATCATTACAATCGATGTTCGCTCGGCATCGGGTTTCTTGGCGACTATCGCGAGGAACTTGACCCACACACCAGAGTTACGGATCTGCAAATAGCAAGGACGAAAATTTTACTTGAAGATGGCGTGAAGCGAGGCTTTCTGCATCCCAAGTACTACATTAATGGTGCTTGCGACTTCCAAAGCACCGCCAGTCCAGGGTCAAACTTGTACAAAGCTTTGAAAAGTTTTGAGCACTTCGACCACAAAGGAATATTAGCGAACAGAACATGTGATGAAATATATACGATTCTCAAGAATAAAATTTAA

Protein

MWSDSDGERELAMMYRPDCSSDFVLMDERMIASASRAAVSPPISQLNVSKSSRVHIGPKFVSVTQKVRNTEEIKELPLPRYLWKVLKNTSRAERLSCSVALTALVICIGLTLYFALTTETVANDDDIDVAPHEWNITREMWLAQIVNDTESVREYNPIRLVIVQHTVSPECDTFQTCASQMRILQSNVLNNLEDDIPYNFLIGNDGRVYEGRGWGLVGAHTYHYNRCSLGIGFLGDYREELDPHTRVTDLQIARTKILLEDGVKRGFLHPKYYINGACDFQSTASPGSNLYKALKSFEHFDHKGILANRTCDEIYTILKNKI

Uniprot

H9ITK6   A0A2A4K4P1   A0A1E1W7N6   A0A194PTB5   A0A194QV31   H9ITK3   + More
A0A142I1V3   A0A2W1BPG7   A0A212FME6   H9ITK5   A0A1E1WHF8   A0A1E1W8A1   A0A0A7DQF0   A0A0L7KSP7   H9ITK4   A0A1E1WCY1   A0A2W1BRA0   A0A194PTY1   A0A224XGV6   A0A170Z8G1   A0A1Y9GZ02   A0A182P8R2   A0A084WKV1   A0A1B6C2E8   B0WH92   D8WN09   A0A0P9C4X2   Q7Q9J6   A7UTA2   A0A2Y9D0K5  

Pubmed

19121390    26354079    28756777    22118469    26227816    24438588    + More
17994087    12364791    14747013    17210077   

EMBL

BABH01006771    BABH01006772    NWSH01000187    PCG78632.1    GDQN01008085    JAT82969.1    + More
KQ459594    KPI96213.1    KQ461108    KPJ09174.1    BABH01006776    BABH01006777    BABH01006778    KT907183    AMR36560.1    KZ150006    PZC75207.1    AGBW02007654    OWR54870.1    BABH01006773    GDQN01004611    JAT86443.1    GDQN01007870    JAT83184.1    KF960045    AIW49872.1    JTDY01006104    KOB66282.1    BABH01006774    BABH01006775    GDQN01006210    JAT84844.1    PZC75206.1    KPI96214.1    GFTR01004711    JAW11715.1    GEMB01002502    JAS00684.1    ATLV01024147    KE525350    KFB50845.1    GEDC01030415    GEDC01029869    JAS06883.1    JAS07429.1    DS231933    EDS27550.1    GU214233    ADI39641.1    CH902618    KPU78782.1    AAAB01008900    EAA09419.4    EDO64109.1    APCN01002820   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000075884    UP000075885    UP000030765    UP000002320    UP000007801    UP000007062    UP000075840   

PRIDE

H9ITK6    H9ITK3    H9ITK5    H9ITK4   

Pfam

PF01510   Amidase_2

Interpro

IPR015510   PGRP        + More
IPR006619   PGRP_domain_met/bac       
IPR002502   Amidase_domain       
IPR036505   Amidase/PGRP_sf       

SUPFAM

SSF55846   SSF55846       

Gene 3D

3.40.80.10    

CDD

cd06583  PGRP

ProteinModelPortal

H9ITK6   A0A2A4K4P1   A0A1E1W7N6   A0A194PTB5   A0A194QV31   H9ITK3   + More
A0A142I1V3   A0A2W1BPG7   A0A212FME6   H9ITK5   A0A1E1WHF8   A0A1E1W8A1   A0A0A7DQF0   A0A0L7KSP7   H9ITK4   A0A1E1WCY1   A0A2W1BRA0   A0A194PTY1   A0A224XGV6   A0A170Z8G1   A0A1Y9GZ02   A0A182P8R2   A0A084WKV1   A0A1B6C2E8   B0WH92   D8WN09   A0A0P9C4X2   Q7Q9J6   A7UTA2   A0A2Y9D0K5  

PDB

2F2L     E-value=8.43888e-27,     Score=298

KEGG

101739748    K01446 peptidoglycan recognition protein | (RefSeq) peptidoglycan recognition protein-like

GO

GO:0009253   GO:0008745   GO:0008270   GO:0016021   GO:0005615   GO:0016019   GO:0019730   GO:0032827   GO:0050830   GO:0042834   GO:0005524   GO:0005622   GO:0030145   GO:0006508   GO:0007169  

PANTHER

PTHR11022  

Length:

322

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.12494

Exp number, first 60 AAs:

0.00254

Total prob of N-in:

0.90858

inside

1  -  94

TMhelix

95  -  117

outside

118  -  322

 

 

Pi

0.460234

Theta

2.563176

Tajima's D

-2.249166

CLR

0.103149

CSRT

0.00144992750362482

Interpretation

Uncertain