Gene

KWMTBOMO00196  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000626

Annotation

PREDICTED:_exosome_component_10_[Amyelois_transitella]

Location

Bomo_Chr1(+):6185423-6199727      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.423 Nuclear   Reliability : 1.373

CDS

ATGAACTCCGCGCTTAATCCAGATGCACCTGAGTTTTATCCACACCTGGCGGCAGTCACACAGGAAGGATATAGAAGTGTTAACAAGACAATAAAGTCGTCAAATCAACTGCCGATGAGCTCTTCGTATGATTTATTTAAAACATATCCAGAATTTAATGAAATTTCAAATCAGATCAGCCAAAATGTTGCTCAACAGTCAAACGAACTGATTGGCACTGAACAACCGGCCGTGAAGCTGAAGTGTGAGGATTTCACAAGCAACATAGAGAAACTTGCTGATGTAAACGACAGCTTATTGGACAGGATTAATATTAGCATTGATACAGTGAGCGGTGAGAACTTACCCAGTGAGGCATTCGCGAGCGGTCTCAATGATAATCCTTCTCATAACTCATCGCCTTGGAATAAGCCTGTCATTTCTGAAAAGAAGATGGGATCAACTATATTCATCGGAGCTAAAAACATTCCGCGTCCACAGCTTACTTTCAAGGATACAATTGATAATTCTGAGAATTTGTGGGTGCCCAAAATTTCAGACAAACCAAACAACATCAAGCCTTTGGCTTTAAACATTTTGTATACCGAGAAGGGCGAAGCTGTTGGATATGAGCATCCATACCAAATGGAGTTGGACATGTATAACCCTCCGTCGCAGTTCATCGATCCCGATCCGGAGCCTCCCATGTTTCCACCCCCTCTGGAGGAAACGAAATTCACTTACATAGATATAGAATCGAAGCTAGACGAGTTGGTTGAACACCTTATGGCCGTCGAACAAATTGCTGTAGATGTAGAACATCATTCCTATAGGACCTATCAGGGCATAACGTGCCTCATTCAAATATCAACTGATGAAGGAGGAGACTTTATCATTGACGCTCTCGCTGTAAGGGAACACATACATAAACTGAATGTCGTCTTCACTGACCCCAAGAAACTAAAGGTGTTCCACGGTGCCGATAGCGATGTTCTTTGGCTTCAACGTGATTTCGGCGTGTATTTGGTGGGTCTTTTCGACACATACCACGCAGCCAAGTCACTAGGTCTGCCCGCGCTTTCGCTCAAATTTCTTTTGATGAAGTATTGCGGCGTTGACACCGATAAAACGTGA

Protein

MNSALNPDAPEFYPHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYTEKGEAVGYEHPYQMELDMYNPPSQFIDPDPEPPMFPPPLEETKFTYIDIESKLDELVEHLMAVEQIAVDVEHHSYRTYQGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKT

Similarity

Belongs to the AB hydrolase superfamily. Lipase family.

Uniprot

H9ITP6   A0A2A4JBP7   A0A2H1VWX8   A0A2A4J9R3   A0A2W1BRB1   A0A212EMN4   + More
A0A0L7L075   S4PRA6   A0A194QUN7   A0A194PYH6   A0A0J7NIP3   A0A0P5V8E6   A0A182PEM0   A0A3L8DR98   A0A026WCC8   K7J5C7   A0A0L7RCV5   E9IEY4   A0A195DCF1   A0A182TRL6   A0A182K798   A0A182LFN7   A0A182XLZ3   A0A0P6D6F6   A0A0N8CBZ7   A0A182HTH4   A0A195F2Z0   F5HK87   Q7QBT6   A0A0P5WQZ6   A0A0P5TW28   A0A158P390   A0A1J1IKT1   A0A0P5UVH9   A0A0N8CL65   A0A0N8C7L1   A0A0P5TW33   A0A0P5IP63   A0A0P4YR15   A0A088ARS5   A0A182VEF2   A0A0P5IK07   A0A1Z5LCK5   E2AJL2   A0A182JDM0   A0A0N8CDV7   A0A0P5B4E1   A0A0P4YM19   F4WM69   A0A0P5E570   A0A195BD00   A0A0P5V1U6   A0A0P5W350   A0A0P4ZB77   A0A0P5MPF3   A0A0P5ECA4   A0A0P5V8E5   A0A0P5V845   A0A151WFD4   A0A0P5YFZ2   A0A0M8ZMM5   A0A0P5G515   A0A0P5UAS4   A0A151IGE3   A0A182W2M2   A0A154PA47   A0A182QEF5   A0A182NG92   A0A1Y1KTQ2   A0A2M4BBY9   A0A2M4BBW4   A0A2M4BCJ6   A0A182MCX6   A0A0P5TLJ6   A0A182XVE5   E9GKT7   A0A2A3E2G0   A0A3B0K1C5   A0A0P4YSW2   W5JI40   A0A023FN87   A0A2M3Z3W2   A0A2P8YHT9   A0A182R756   B4PSN8   B4NJ59   A0A0P6BGD3   A0A1W4W0P5   A0A224YSY7   Q29AI2   A0A1S4FNZ8   A0A2M4A807   A0A2M4A816   A0A2M4A8Q1   A0A0L0CBS3   A0A1I8M6P5   A0A182FQ03   A0A1I8PA12  

Pubmed

19121390    28756777    22118469    26227816    23622113    26354079    + More
30249741    24508170    20075255    21282665    20966253    12364791    14747013    17210077    21347285    28528879    20798317    21719571    28004739    25244985    21292972    20920257    23761445    29403074    17994087    17550304    28797301    15632085    26108605    25315136   

EMBL

BABH01006761    BABH01006762    BABH01006763    NWSH01002247    PCG68823.1    ODYU01004929    + More
SOQ45308.1    PCG68825.1    KZ150006    PZC75216.1    AGBW02013811    OWR42755.1    JTDY01003871    KOB68897.1    GAIX01000970    JAA91590.1    KQ461108    KPJ09182.1    KQ459594    KPI96205.1    LBMM01004468    KMQ92385.1    GDIP01102924    JAM00791.1    QOIP01000005    RLU22965.1    KK107293    EZA53331.1    AAZX01008278    AAZX01019459    AAZX01019480    KQ414614    KOC68822.1    GL762728    EFZ20873.1    KQ980989    KYN10566.1    GDIQ01090032    JAN04705.1    GDIQ01094683    JAL57043.1    APCN01000528    KQ981855    KYN34751.1    AAAB01008859    EGK96928.1    EAA07463.5    GDIP01082835    JAM20880.1    GDIP01120926    JAL82788.1    ADTU01001310    CVRI01000054    CRL00784.1    GDIP01108235    JAL95479.1    GDIP01120927    JAL82787.1    GDIQ01106971    JAL44755.1    GDIP01120925    JAL82789.1    GDIQ01212384    JAK39341.1    GDIP01225866    JAI97535.1    GDIQ01212383    JAK39342.1    GFJQ02001838    JAW05132.1    GL440027    EFN66407.1    GDIP01141391    JAL62323.1    GDIP01189827    JAJ33575.1    GDIP01225867    JAI97534.1    GL888217    EGI64713.1    GDIP01146384    JAJ77018.1    KQ976522    KYM82087.1    GDIP01108234    GDIP01084631    LRGB01002190    JAL95480.1    KZS08544.1    GDIP01105728    JAL97986.1    GDIP01216570    JAJ06832.1    GDIQ01176190    JAK75535.1    GDIP01143535    JAJ79867.1    GDIP01102925    JAM00790.1    GDIP01105729    JAL97985.1    KQ983219    KYQ46537.1    GDIP01059289    JAM44426.1    KQ438551    KOX67177.1    GDIQ01246184    JAK05541.1    GDIP01115677    JAL88037.1    KQ977726    KYN00296.1    KQ434856    KZC08697.1    AXCN02001628    GEZM01073849    JAV64782.1    GGFJ01001399    MBW50540.1    GGFJ01001398    MBW50539.1    GGFJ01001397    MBW50538.1    AXCM01000235    GDIP01126038    JAL77676.1    GL732550    EFX79910.1    KZ288427    PBC25885.1    OUUW01000013    SPP88034.1    GDIP01223508    JAI99893.1    ADMH02001428    ETN62570.1    GBBK01002147    JAC22335.1    GGFM01002460    MBW23211.1    PYGN01000583    PSN43819.1    CM000160    EDW97534.1    CH964272    EDW83852.1    GDIP01015024    JAM88691.1    GFPF01007713    MAA18859.1    CM000070    EAL27368.1    GGFK01003612    MBW36933.1    GGFK01003622    MBW36943.1    GGFK01003862    MBW37183.1    JRES01000641    KNC29695.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    + More
UP000036403    UP000075885    UP000279307    UP000053097    UP000002358    UP000053825    UP000078492    UP000075902    UP000075881    UP000075882    UP000076407    UP000075840    UP000078541    UP000007062    UP000005205    UP000183832    UP000005203    UP000075903    UP000000311    UP000075880    UP000007755    UP000078540    UP000076858    UP000075809    UP000053105    UP000078542    UP000075920    UP000076502    UP000075886    UP000075884    UP000075883    UP000076408    UP000000305    UP000242457    UP000268350    UP000000673    UP000245037    UP000075900    UP000002282    UP000007798    UP000192221    UP000001819    UP000037069    UP000095301    UP000069272    UP000095300   

PRIDE

H9ITP6   

Pfam

PF08066   PMC2NT        + More
PF00570   HRDC
PF01612   DNA_pol_A_exo1
PF00151   Lipase
PF04142   Nuc_sug_transp

Interpro

IPR012588   Exosome-assoc_fac_Rrp6_N        + More
IPR010997   HRDC-like_sf       
IPR002121   HRDC_dom       
IPR002562   3'-5'_exonuclease_dom       
IPR012337   RNaseH-like_sf       
IPR029058   AB_hydrolase       
IPR013818   Lipase/vitellogenin       
IPR000734   TAG_lipase       
IPR033906   Lipase_N       
IPR007271   Nuc_sug_transpt       

SUPFAM

SSF53098   SSF53098        + More
SSF47819   SSF47819       
SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

CDD

cd00707  Pancreat_lipase_like

ProteinModelPortal

H9ITP6   A0A2A4JBP7   A0A2H1VWX8   A0A2A4J9R3   A0A2W1BRB1   A0A212EMN4   + More
A0A0L7L075   S4PRA6   A0A194QUN7   A0A194PYH6   A0A0J7NIP3   A0A0P5V8E6   A0A182PEM0   A0A3L8DR98   A0A026WCC8   K7J5C7   A0A0L7RCV5   E9IEY4   A0A195DCF1   A0A182TRL6   A0A182K798   A0A182LFN7   A0A182XLZ3   A0A0P6D6F6   A0A0N8CBZ7   A0A182HTH4   A0A195F2Z0   F5HK87   Q7QBT6   A0A0P5WQZ6   A0A0P5TW28   A0A158P390   A0A1J1IKT1   A0A0P5UVH9   A0A0N8CL65   A0A0N8C7L1   A0A0P5TW33   A0A0P5IP63   A0A0P4YR15   A0A088ARS5   A0A182VEF2   A0A0P5IK07   A0A1Z5LCK5   E2AJL2   A0A182JDM0   A0A0N8CDV7   A0A0P5B4E1   A0A0P4YM19   F4WM69   A0A0P5E570   A0A195BD00   A0A0P5V1U6   A0A0P5W350   A0A0P4ZB77   A0A0P5MPF3   A0A0P5ECA4   A0A0P5V8E5   A0A0P5V845   A0A151WFD4   A0A0P5YFZ2   A0A0M8ZMM5   A0A0P5G515   A0A0P5UAS4   A0A151IGE3   A0A182W2M2   A0A154PA47   A0A182QEF5   A0A182NG92   A0A1Y1KTQ2   A0A2M4BBY9   A0A2M4BBW4   A0A2M4BCJ6   A0A182MCX6   A0A0P5TLJ6   A0A182XVE5   E9GKT7   A0A2A3E2G0   A0A3B0K1C5   A0A0P4YSW2   W5JI40   A0A023FN87   A0A2M3Z3W2   A0A2P8YHT9   A0A182R756   B4PSN8   B4NJ59   A0A0P6BGD3   A0A1W4W0P5   A0A224YSY7   Q29AI2   A0A1S4FNZ8   A0A2M4A807   A0A2M4A816   A0A2M4A8Q1   A0A0L0CBS3   A0A1I8M6P5   A0A182FQ03   A0A1I8PA12  

PDB

6D6R     E-value=5.88916e-49,     Score=490

KEGG

100141462    K12591 exosome complex exonuclease RRP6 [EC:3.1.13.-] | (RefSeq) Pm-scl, BmPM-Scl; PM-Scl autoantige

GO

GO:0006396   GO:0000176   GO:0000166   GO:0003676   GO:0008408   GO:0005576   GO:0006629   GO:0052689   GO:0000139   GO:0016021   GO:0015165   GO:0005652   GO:0000278   GO:0010468   GO:0051607   GO:0071027   GO:0006378   GO:0007059   GO:0005730   GO:0006139   GO:0030145   GO:0005622   GO:0006508   GO:0007169  

Subcellular location

Secreted  

Length:

370

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17261

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00585

outside

1  -  370

 

 

Pi

0.763926

Theta

4.669905

Tajima's D

-2.51867

CLR

1.759402

CSRT

9.99950002499875e-05

Interpretation

Uncertain