Gene

KWMTBOMO00187

Pre Gene Modal

BGIBMGA000593

Annotation

PREDICTED:_hikaru_genki_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(-):5967939-5978092      View in EpiBrowser

Full name

Locomotion-related protein Hikaru genki      

Location in the cell

Extracellular   Reliability : 2.503

CDS

ATGCAGCTCTTGTTGCTAATATTTATTCCCTTCGTGGTCAGTGAGGACACTGGTATTGATGATTTTTCAGAAGAAGATTTTAAGTGCTCCCTACCTGATGTAACCAGTCCTAATCAAAAAGTTGATATAAATAGGATTCGTGCGGACTTCTCTAAAATATCTGAGGTTAAATTTCCTGGTTTGATTGGTCCATTAAATGAAAGATTAATCTGCAAAATTAAGTGCATCGATGGGAACTGGGTAGGACCGCTTTGCGCTAGTACTCCGGATGGTAGATTCCAACCAATATTAAGGCAGTGCTTATACAAACACGAACATCCACTATTAGCAATTTCATTTAGAAATTCTTCAATTGAAAAAGAAACTAGTTTTCCACATGGCTCTTCAATAGTGGCAAGGTGTATACATTTCGGTTTTTATAAGCTGAAAGGAGATAACACAATGCACTGTGAGAATGGGGAGTGGGTGCCAAAGTTTCCAGAATGCGTTCCGACCAGTGTCATCACTAATTTTACAGGCGACGCTCCACCCACTATACAGTACGCAATTATAAGTGGTTCAGCAGTTGTAGAACCCACAGGAGAATTGTTCGTTTTCCCTGACAGTACTCTACGTCTAGACTGTGTTACTCCAAGAGCTTTAGGCAACCCGGAATGGAGTTGGACGCAAGCCCTTGGAAATTACGAAACCGGCTGGTCATCGGACGAAGGCGAGAAGTATACCCATTACAGACTGACGCTGTCAAAGATGTCCGCGCGTCATAGTGACACGTACACTTGTGCCACTCCAACGGGACACACCAATACAGTGATCGTTAAAGTTGTTAATGTAGTTTGTCCAACAATAAACGTGTCTTCGCCTCGGCTACGTCAGTTTACACAAGGAACTAGACTTGGTCATTCGGCCCACTTTAGTTGTCAATCTGGTTTTCATCTTAATGGCTCTGCAATTTTGACTTGTATGGGAAACGGTCATTGGTCAACCAGCCTTCCGACATGCCTGGAAACTTTCTGTCCCATGTTGAAGTCTTTAGGTCCTCACTTAAGTTTCGTTGAATATAATTCGTCATTTGGGGGTCGTGCCGTATTTCAGTGTGCCTGGGGCTACAGGCTTGTGGGTTCACCAGGTTTGGAATGTGAACATGACGGTCAGTGGTCTGGAGAGGTGCCAATTTGTTCACCAATCTATTGCCCTGATCCATTAGTCCCAGAAAAGGGACGTCTGCTAATAGAGCCATCTTCAAAGCACGGCAAATATACTGTTGGGGACCTTATGATATATGATTGCGAAGACGGTTACGACATTGTCGGAGAGTCTTCTATAGTCTGTACTGAAAACGGATATTGGTCACATCCCCCACCTTTCTGCCTACTCCCTTCGGTGATCAAAAAGGCTGATACTATATTTATTGAGAATATAACATTAGTTCATGTCGAAGAATAA

Protein

MQLLLLIFIPFVVSEDTGIDDFSEEDFKCSLPDVTSPNQKVDINRIRADFSKISEVKFPGLIGPLNERLICKIKCIDGNWVGPLCASTPDGRFQPILRQCLYKHEHPLLAISFRNSSIEKETSFPHGSSIVARCIHFGFYKLKGDNTMHCENGEWVPKFPECVPTSVITNFTGDAPPTIQYAIISGSAVVEPTGELFVFPDSTLRLDCVTPRALGNPEWSWTQALGNYETGWSSDEGEKYTHYRLTLSKMSARHSDTYTCATPTGHTNTVIVKVVNVVCPTINVSSPRLRQFTQGTRLGHSAHFSCQSGFHLNGSAILTCMGNGHWSTSLPTCLETFCPMLKSLGPHLSFVEYNSSFGGRAVFQCAWGYRLVGSPGLECEHDGQWSGEVPICSPIYCPDPLVPEKGRLLIEPSSKHGKYTVGDLMIYDCEDGYDIVGESSIVCTENGYWSHPPPFCLLPSVIKKADTIFIENITLVHVEE

Description

Plays a role in the formation of functional neural circuits from the early stages of synapse formation. Has a role in the development of CNS functions involved in locomotor activity.

Keywords

Alternative splicing   Complete proteome   Developmental protein   Differentiation   Disulfide bond   Glycoprotein   Immunoglobulin domain   Neurogenesis   Reference proteome   Repeat   Secreted   Signal   Sushi  

Feature

chain  Locomotion-related protein Hikaru genki
splice variant  In isoform 2 and isoform 4.

Uniprot

Q8T107   A0A2H1VCU8   A0A2A4JSR1   A0A194QUI8   A0A194PYG6   A0A212EMP9   + More
A0A1Y1LXX9   D6WED9   A0A182UF95   A0A182YP52   A0A067RD90   A0A182V460   A0A084VU15   A0A182L022   N6U4T2   A0A182QFQ6   A0A1S4F8F7   U4UAZ7   A0A182X1A0   A0A182VSH5   A0A097C0C8   A0A182NT73   A0A1B6DY07   A0A182IBS7   A0A182GYI5   A0A182J4C0   Q17C51   A0A1Q3G561   A0A1Q3G566   T1PM56   A0A1I8M8I0   A0A182FNB2   A0A1B0CI55   A0A1I8P321   A0A336K207   A0A1I8P364   A0A182P4N1   A0A0P8Y3Y9   A0A1Q3G549   A0A1Q3G551   A0A0P8XP02   Q09101-3   B4HSP9   A0A0Q9XJK2   T1PKT7   A0A1I8P323   A0A1I8M8H7   A0A0J9R8T5   A0A3B0JCJ9   A0A0Q5WBT7   Q09101-4   A0A0R1DMH4   A0A1W4UXL7   E0R955   A0A1A9ZVK6   A0A0M4EKS7   A0A0Q9WT91   N6W437   A0A1I8P316   A0A1I8P341   A0A1J1JBT1   A0A034VZY3   A0A3B0JK00   B3MFL4   Q09101-2   B4KPP0   A0A0L0CFV5   A0A0J9R8T6   Q09101   B3N7I7   B4P3Z6   A0A1W4UK55   A0A1B0G5E7   B4J7Q6   B4N5Z2   Q28ZI0   B4LJ78   A0A034VWD4   A0A0A1XH07   B4QH67   A0NF06   A0A1S4GZB5   A0A1S4GZ96   A0A146L2J9   A0A0M9A6Z0   J9M6V7   A0A088A3G8   A0A2H8U1F6   V9IKP1   K7IW33   E0W1Q1   A0A232FJL9   A0A1B0AZJ9   A0A1A9YPV5   A0A1A9VAB3   A0A0L7QS42   A0A154NYB2   A0A026WV69   A0A2S2QAW8  

Pubmed

12715162    26354079    22118469    28004739    18362917    19820115    + More
25244985    24845553    24438588    20966253    23537049    17510324    26483478    25315136    17994087    8461133    10731132    12537572    12537569    8625810    9914413    17893096    22936249    17550304    15632085    25348373    26108605    25830018    12364791    26823975    20075255    20566863    28648823    24508170   

EMBL

AB079861    AB090307    BAB85192.1    ODYU01001673    SOQ38222.1    NWSH01000699    + More
PCG74728.1    KQ461108    KPJ09193.1    KQ459594    KPI96195.1    AGBW02013811    OWR42747.1    GEZM01045068    JAV77941.1    KQ971318    EFA01313.2    KK852542    KDR21722.1    ATLV01016628    KE525098    KFB41459.1    APGK01049590    APGK01049591    KB741156    ENN73567.1    AXCN02000728    KB632169    ERL89483.1    KM363233    AIS74715.1    GEDC01006744    JAS30554.1    APCN01000734    APCN01000735    JXUM01097762    JXUM01097763    JXUM01097764    JXUM01097765    KQ564368    KXJ72377.1    CH477313    EAT43851.1    GFDL01000111    JAV34934.1    GFDL01000112    JAV34933.1    KA649160    AFP63789.1    AJWK01013041    AJWK01013042    AJWK01013043    AJWK01013044    AJWK01013045    AJWK01013046    AJWK01013047    UFQS01000031    UFQT01000031    SSW97842.1    SSX18228.1    CH902619    KPU76370.1    GFDL01000120    JAV34925.1    GFDL01000121    JAV34924.1    KPU76371.1    D13884    D13885    D13886    D13887    AE013599    AY069188    BT001427    CH480816    EDW47076.1    CH933808    KRG04471.1    KA649329    AFP63958.1    CM002911    KMY92483.1    OUUW01000001    SPP72940.1    CH954177    KQS70796.1    CM000157    KRJ98468.1    BT125623    ADM33451.1    CP012524    ALC42042.1    CH964154    KRF99156.1    CM000071    ENO01632.1    CVRI01000075    CRL08537.1    GAKP01011310    JAC47642.1    SPP72941.1    EDV36699.1    EDW09150.1    JRES01000440    KNC31126.1    KMY92482.1    EDV59392.1    EDW89479.1    CCAG010007282    CH916367    EDW02204.1    EDW79781.1    EAL25633.2    CH940648    EDW61514.2    GAKP01011311    JAC47641.1    GBXI01004055    JAD10237.1    CM000362    EDX06321.1    AAAB01008964    EAU76294.2    GDHC01016011    JAQ02618.1    KQ435724    KOX78515.1    ABLF02038631    ABLF02038632    ABLF02038638    ABLF02038639    ABLF02038645    ABLF02038646    ABLF02042181    ABLF02044375    GFXV01008086    MBW19891.1    JR049720    AEY61051.1    DS235873    EEB19633.1    NNAY01000104    OXU30931.1    JXJN01006339    JXJN01006340    JXJN01006341    KQ414758    KOC61448.1    KQ434783    KZC04666.1    KK107111    EZA58999.1    GGMS01005680    MBY74883.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000007266    UP000075902    + More
UP000076408    UP000027135    UP000075903    UP000030765    UP000075882    UP000019118    UP000075886    UP000030742    UP000076407    UP000075920    UP000075884    UP000075840    UP000069940    UP000249989    UP000075880    UP000008820    UP000095301    UP000069272    UP000092461    UP000095300    UP000075885    UP000007801    UP000000803    UP000001292    UP000009192    UP000268350    UP000008711    UP000002282    UP000192221    UP000092445    UP000092553    UP000007798    UP000001819    UP000183832    UP000037069    UP000092444    UP000001070    UP000008792    UP000000304    UP000007062    UP000053105    UP000007819    UP000005203    UP000002358    UP000009046    UP000215335    UP000092460    UP000092443    UP000078200    UP000053825    UP000076502    UP000053097   

PRIDE

Q8T107    Q09101    E0R955   

Pfam

PF00084   Sushi        + More
PF07686   V-set

Interpro

IPR007110   Ig-like_dom        + More
IPR013783   Ig-like_fold       
IPR035976   Sushi/SCR/CCP_sf       
IPR000436   Sushi_SCR_CCP_dom       
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR013106   Ig_V-set       
IPR002396   Selectin_superfamily       

SUPFAM

SSF57535   SSF57535        + More
SSF48726   SSF48726       

Gene 3D

2.60.40.10    

CDD

cd00033  CCP

ProteinModelPortal

Q8T107   A0A2H1VCU8   A0A2A4JSR1   A0A194QUI8   A0A194PYG6   A0A212EMP9   + More
A0A1Y1LXX9   D6WED9   A0A182UF95   A0A182YP52   A0A067RD90   A0A182V460   A0A084VU15   A0A182L022   N6U4T2   A0A182QFQ6   A0A1S4F8F7   U4UAZ7   A0A182X1A0   A0A182VSH5   A0A097C0C8   A0A182NT73   A0A1B6DY07   A0A182IBS7   A0A182GYI5   A0A182J4C0   Q17C51   A0A1Q3G561   A0A1Q3G566   T1PM56   A0A1I8M8I0   A0A182FNB2   A0A1B0CI55   A0A1I8P321   A0A336K207   A0A1I8P364   A0A182P4N1   A0A0P8Y3Y9   A0A1Q3G549   A0A1Q3G551   A0A0P8XP02   Q09101-3   B4HSP9   A0A0Q9XJK2   T1PKT7   A0A1I8P323   A0A1I8M8H7   A0A0J9R8T5   A0A3B0JCJ9   A0A0Q5WBT7   Q09101-4   A0A0R1DMH4   A0A1W4UXL7   E0R955   A0A1A9ZVK6   A0A0M4EKS7   A0A0Q9WT91   N6W437   A0A1I8P316   A0A1I8P341   A0A1J1JBT1   A0A034VZY3   A0A3B0JK00   B3MFL4   Q09101-2   B4KPP0   A0A0L0CFV5   A0A0J9R8T6   Q09101   B3N7I7   B4P3Z6   A0A1W4UK55   A0A1B0G5E7   B4J7Q6   B4N5Z2   Q28ZI0   B4LJ78   A0A034VWD4   A0A0A1XH07   B4QH67   A0NF06   A0A1S4GZB5   A0A1S4GZ96   A0A146L2J9   A0A0M9A6Z0   J9M6V7   A0A088A3G8   A0A2H8U1F6   V9IKP1   K7IW33   E0W1Q1   A0A232FJL9   A0A1B0AZJ9   A0A1A9YPV5   A0A1A9VAB3   A0A0L7QS42   A0A154NYB2   A0A026WV69   A0A2S2QAW8  

PDB

2Q7Z     E-value=3.91525e-16,     Score=208

KEGG

100141455    no KO assigned | (RefSeq) Hig, Bmhig; hikaru genki

GO

GO:0030246   GO:0008039   GO:0043083   GO:0043025   GO:0016020   GO:0007155   GO:0016787   GO:0005515   GO:0016798   GO:0005975   GO:0016192   GO:0031251   GO:0004672   GO:0003707   GO:0007169   GO:0016021  

Subcellular location

Secreted  

SignalP

Position:   1 - 14,         Likelihood:  0.966571

 

 

Length:

480

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00176

Exp number, first 60 AAs:

0.00068

Total prob of N-in:

0.00015

outside

1  -  480

 

 

Pi

1.082403

Theta

3.764456

Tajima's D

-2.24447

CLR

0

CSRT

0.00294985250737463

Interpretation

Uncertain