Gene

KWMTBOMO00182

Pre Gene Modal

BGIBMGA000597

Annotation

PREDICTED:_protein_NDRG3-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr1(-):5790724-5874022      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.121 PlasmaMembrane   Reliability : 1.092

CDS

ATGCCATCGAACAATGCCGAAGAAACTGCTCTGCTTGGTATGGACGACATCGAACTTCGCAACATCCAACTGCAGTTCCCGAGTGCTCGCCGGTTTAGCGGAGAAGCCGCTTGTACCGAGGTGCGGGTGCGCACCGACCGCGGCGACATCCTCGTCGCTGTGCAAGGAGACCGTAACAAGCCCGCCATCATAACCTATCATGACCTCGGCCTCAACTACGCGTCATTTCAACCGTTCTTCGGATACGTCGATATGAGGGCTCTGCTCGAAAACTTTTGCGTGTACCATGTCAACGCTCCAGGCCAAGAGGAAGGCGCCCCGAGCTTGCCGGAAGACTATATGTATCCATCGATGGACGAGTTGGCGAATCAACTGAACTACGTCATGGGCCACTTCGGCATCAAGACCTTTATAGGATTCGGCGTGGGCGCTGGAGCGAACGTGCTTGCTAGATTCGCTCTTATCCACCCTAAGAAGGTAGATGCGCTGACATTGATCAACTGCACATCGAACCAGGCCGGATGGATCGAGTGGGCTTACCAGAAGATGAACACTCGGTCCCTTCGTTCCCGTGGCATGACCCAGGGCGTGCTGGACTACCTTTTGTGGCATCATTTCGGACGTTTCCCCGAAGACCGCAACCACGATCTGACCCAGATGTACAAGAACTATTTCACACGTAACGTGAACCCCAGCAACCTGTCGATGTTCATTGAGGCGTACGTGCGGCGCTCCGACCTGGGTATATGCCGTAACGCCGACACCATCAAGGTGCCGGTGTTGAACATCACGGGTGCTCTGTCACCTCACGTAGACGACACGGTGACCTTCAACGGACGTCTCAACCCGAACAATTCGACTTGGATGAAGGTGATTACTGATTTTTGTTTATTGATTGCTTAG

Protein

MPSNNAEETALLGMDDIELRNIQLQFPSARRFSGEAACTEVRVRTDRGDILVAVQGDRNKPAIITYHDLGLNYASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPEDYMYPSMDELANQLNYVMGHFGIKTFIGFGVGAGANVLARFALIHPKKVDALTLINCTSNQAGWIEWAYQKMNTRSLRSRGMTQGVLDYLLWHHFGRFPEDRNHDLTQMYKNYFTRNVNPSNLSMFIEAYVRRSDLGICRNADTIKVPVLNITGALSPHVDDTVTFNGRLNPNNSTWMKVITDFCLLIA

Uniprot

A0A151WUB5   A0A195D3F7   D6WIE5   A0A151JAK7   A0A3L8E0F2   A0A195FJN0   + More
A0A212EMP0   E2CA28   A0A154NXW5   A0A1Y1NF36   E9IGE7   A0A0C9R5X4   A0A0C9RD71   V9I8H3   V9I7Z6   A0A1Y1NDF7   H9J604   A0A0C9QIM9   V9I801   A0A0L7QUG1   A0A1B6C6P6   A0A1B6DTW4   A0A1B6CUF5   A0A195BB09   A0A067RB19   A0A026WXL0   E2AD05   V9I6T0   V9I6U9   A0A1B6HET2   V9I8W4   A0A088AS25   A0A1B6F6K5   A0A1B6JTG2   A0A1B6JFE1   A0A2A4K621   N6UI40   A0A1B6J8Q5   A0A1B6H2T0   A0A310S906   A0A212FNA1   A0A1Y1NCE7   N6UR40   A0A1Y1N9T6   N6UCG0   A0A1B6KI75   U4TSW9   A0A2J7RJQ1   A0A1B6ECJ9   A0A1B6CF76   A0A1B6DW05   A0A1B6CKS7   A0A2J7RJP6   A0A1B6DUP9   A0A1B6LBZ6   A0A1B6LPC0   A0A1B6GBT7   K7J7N9   A0A2H1V6E7   A0A1A9X3V4   D3TPL7   B3MC62   A0A0L7L547   A0A1B6H4L6   A0A0P9ADB4   A0A0L0CG12   A0A0Q9X0U4   A0A0Q9WW06   A0A0Q9WNV9   A0A0A9W699   A0A1B0BGG3   A0A1W4WSX3   A0A1L8E914   A0A0R1DRW1   A0A0P8ZMU1   A0A0Q9X8C1   A0A194RL81   A0A0P8XN35   A0A1I8P965   A0A0J9U7R4   Q8IRK7   A0A0Q5VLG5   A0A0R1DRB8   A0A0Q9XJU2   A0A1I8P9E8   A0A0Q9XHA7   A0A0Q5VZ33   A0A1I8P974   A0A0A9Y7U1   A0A1L8EBL8   A0A0J9RHQ3   Q9I7V7   B4P8Y8   A0A1L8E9V7   A0A0Q5VVL7   A0A0A9Y2A5   A0A0J9RJE4   A0A0P9BX06   A0A0J9RI55   A0A1L8ECJ9  

Pubmed

18362917    19820115    30249741    22118469    20798317    28004739    + More
21282665    19121390    24845553    24508170    23537049    20075255    20353571    17994087    26227816    26108605    25401762    17550304    26354079    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26823975    18057021   

EMBL

KQ982753    KYQ51225.1    KQ976885    KYN07391.1    KQ971334    EFA01066.1    + More
KQ979302    KYN21983.1    QOIP01000002    RLU25659.1    KQ981523    KYN40209.1    AGBW02013811    OWR42739.1    GL453920    EFN75183.1    KQ434772    KZC03934.1    GEZM01009844    JAV94267.1    GL762997    EFZ20356.1    GBYB01003360    JAG73127.1    GBYB01004866    GBYB01004876    JAG74633.1    JAG74643.1    JR035902    AEY56771.1    JR035898    JR035899    AEY56767.1    AEY56768.1    GEZM01009845    JAV94266.1    BABH01029906    GBYB01003364    JAG73131.1    JR035903    AEY56772.1    KQ414736    KOC62101.1    GEDC01028224    JAS09074.1    GEDC01008213    JAS29085.1    GEDC01020176    JAS17122.1    KQ976530    KYM81718.1    KK852768    KDR16945.1    KK107069    EZA60767.1    GL438632    EFN68689.1    JR035904    AEY56773.1    JR035900    JR035901    AEY56769.1    AEY56770.1    GECU01034561    JAS73145.1    JR035905    AEY56774.1    GECZ01024276    JAS45493.1    GECU01005188    JAT02519.1    GECU01009791    GECU01004409    JAS97915.1    JAT03298.1    NWSH01000091    PCG79677.1    APGK01034449    KB740914    ENN78322.1    GECU01012142    JAS95564.1    GECZ01000839    JAS68930.1    KQ763659    OAD54893.1    AGBW02006247    OWR55224.1    GEZM01009846    JAV94265.1    APGK01005064    KB736063    ENN83261.1    GEZM01009843    JAV94268.1    APGK01034447    ENN78321.1    GEBQ01028862    JAT11115.1    KB631607    ERL84619.1    NEVH01002989    PNF41064.1    GEDC01001704    JAS35594.1    GEDC01025182    GEDC01025069    JAS12116.1    JAS12229.1    GEDC01007471    JAS29827.1    GEDC01023204    JAS14094.1    PNF41065.1    GEDC01011597    GEDC01007898    JAS25701.1    JAS29400.1    GEBQ01018768    JAT21209.1    GEBQ01014520    JAT25457.1    GECZ01009883    JAS59886.1    AAZX01002864    ODYU01000905    SOQ36369.1    EZ423369    ADD19645.1    CH902619    EDV36162.1    JTDY01002937    KOB70456.1    GECZ01000153    JAS69616.1    KPU76053.1    JRES01000440    KNC31157.1    CH963846    KRF97554.1    KRF97556.1    KRF97557.1    GBHO01040673    GBRD01002285    JAG02931.1    JAG63536.1    JXJN01013840    JXJN01013841    GFDG01003723    JAV15076.1    CM000158    KRJ99726.1    KPU76049.1    CH933808    KRG04623.1    KQ460045    KPJ18179.1    KPU76046.1    CM002911    KMY95555.1    AE013599    AAM70904.3    CH954179    KQS62295.1    KRJ99724.1    KRG04625.1    KRG04628.1    KQS62298.1    GBHO01016441    GDHC01005623    JAG27163.1    JAQ13006.1    GFDG01002793    JAV16006.1    KMY95568.1    AAM70907.2    EDW91242.1    GFDG01003413    JAV15386.1    KQS62299.1    GBHO01016437    GBRD01015544    JAG27167.1    JAG50282.1    KMY95564.1    KPU76048.1    KPU76050.1    KMY95566.1    GFDG01002331    JAV16468.1   

Proteomes

UP000075809    UP000078542    UP000007266    UP000078492    UP000279307    UP000078541    + More
UP000007151    UP000008237    UP000076502    UP000005204    UP000053825    UP000078540    UP000027135    UP000053097    UP000000311    UP000005203    UP000218220    UP000019118    UP000030742    UP000235965    UP000002358    UP000091820    UP000007801    UP000037510    UP000037069    UP000007798    UP000092460    UP000192223    UP000002282    UP000009192    UP000053240    UP000095300    UP000000803    UP000008711   

PRIDE

H9J604    Q8IRK7    Q9I7V7   

Pfam

PF03096   Ndr

Interpro

IPR004142   NDRG        + More
IPR029058   AB_hydrolase       

SUPFAM

SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

ProteinModelPortal

A0A151WUB5   A0A195D3F7   D6WIE5   A0A151JAK7   A0A3L8E0F2   A0A195FJN0   + More
A0A212EMP0   E2CA28   A0A154NXW5   A0A1Y1NF36   E9IGE7   A0A0C9R5X4   A0A0C9RD71   V9I8H3   V9I7Z6   A0A1Y1NDF7   H9J604   A0A0C9QIM9   V9I801   A0A0L7QUG1   A0A1B6C6P6   A0A1B6DTW4   A0A1B6CUF5   A0A195BB09   A0A067RB19   A0A026WXL0   E2AD05   V9I6T0   V9I6U9   A0A1B6HET2   V9I8W4   A0A088AS25   A0A1B6F6K5   A0A1B6JTG2   A0A1B6JFE1   A0A2A4K621   N6UI40   A0A1B6J8Q5   A0A1B6H2T0   A0A310S906   A0A212FNA1   A0A1Y1NCE7   N6UR40   A0A1Y1N9T6   N6UCG0   A0A1B6KI75   U4TSW9   A0A2J7RJQ1   A0A1B6ECJ9   A0A1B6CF76   A0A1B6DW05   A0A1B6CKS7   A0A2J7RJP6   A0A1B6DUP9   A0A1B6LBZ6   A0A1B6LPC0   A0A1B6GBT7   K7J7N9   A0A2H1V6E7   A0A1A9X3V4   D3TPL7   B3MC62   A0A0L7L547   A0A1B6H4L6   A0A0P9ADB4   A0A0L0CG12   A0A0Q9X0U4   A0A0Q9WW06   A0A0Q9WNV9   A0A0A9W699   A0A1B0BGG3   A0A1W4WSX3   A0A1L8E914   A0A0R1DRW1   A0A0P8ZMU1   A0A0Q9X8C1   A0A194RL81   A0A0P8XN35   A0A1I8P965   A0A0J9U7R4   Q8IRK7   A0A0Q5VLG5   A0A0R1DRB8   A0A0Q9XJU2   A0A1I8P9E8   A0A0Q9XHA7   A0A0Q5VZ33   A0A1I8P974   A0A0A9Y7U1   A0A1L8EBL8   A0A0J9RHQ3   Q9I7V7   B4P8Y8   A0A1L8E9V7   A0A0Q5VVL7   A0A0A9Y2A5   A0A0J9RJE4   A0A0P9BX06   A0A0J9RI55   A0A1L8ECJ9  

PDB

2XMR     E-value=1.73187e-50,     Score=502

KEGG

101742896    no KO assigned | (RefSeq) protein NDRG3-like

GO

GO:0007165   GO:0005737   GO:0046579  

PANTHER

PTHR11034  

Length:

300

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

13.45496

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.32264

outside

1  -  300

 

 

Pi

18.239919

Theta

17.854015

Tajima's D

-1.376621

CLR

0.041026

CSRT

0.0744962751862407

Interpretation

Uncertain