Gene

KWMTBOMO00181  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000617

Annotation

PREDICTED:_syntaxin-7_[Amyelois_transitella]

Location

Bomo_Chr1(+):5704293-5713711      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.763

CDS

ATGGAGGCGTCTTATCAAGGAGGTGTGTCATACGATGAGAATGGAGATAACTTTCAACGACTTTCTCAAACTATCGCCAGTAATATTAAGAAAATATCCCAAAATGTATCCTCAATGTCAAAGATGGTCAATCAGTTACAAACACCTCAAGACTCCCAAGAGCTTAGGGCTCAGTTACGCCAAATACAAAATTACACTCAGAAGCTGGCAAAGGACACTTCCTCTTTGTTAATGGAGTTGATGAGAATGCCTAAAGATAACGCTGCCAACAAACTTACCAGAGAACGACTCAGTGATGAGTATATTGCCACTCTTAATAGTTTCCAGGCAACACAACGACTCGTTGCGCAAAAGACAAAAGAAGATGTGAAAAAAGCAAAGGCTCAGTCTATAAATATTGGGGATCCTTTCGCTATGGGGAACAGTAACAAAGATTTGGTAGAGATGACCGAGACAGATGTCCGTAAGCAGGAGCAAATGAATATGCAAGCTGAACGTTCTCTCGTCGAATTGGAGGAACGCGAAAGAGATATTCGGCAACTTGAGAGTGACATACTAACCGTTAACGACATCTTCAAAGAGCTGAGTACAATGATACACGCTCAAGGCGAAGTTGTGGACTCCATCGAGTCTAGTGTTGAATACACGGCACAGAACGTCGAGAGCGCCACACAGCAACTCCGGGAGGCTGGGAATTACAAAAACAAACTGAGGAAGAAGAAAGTCTACTTGGCGATAATATTGATCATTGTGGTGTCAATAATCTTGATCGTTTTGTTCCACAACTAA

Protein

MEASYQGGVSYDENGDNFQRLSQTIASNIKKISQNVSSMSKMVNQLQTPQDSQELRAQLRQIQNYTQKLAKDTSSLLMELMRMPKDNAANKLTRERLSDEYIATLNSFQATQRLVAQKTKEDVKKAKAQSINIGDPFAMGNSNKDLVEMTETDVRKQEQMNMQAERSLVELEERERDIRQLESDILTVNDIFKELSTMIHAQGEVVDSIESSVEYTAQNVESATQQLREAGNYKNKLRKKKVYLAIILIIVVSIILIVLFHN

Similarity

Belongs to the syntaxin family.

Uniprot

H9ITN7   A0A1E1WNZ0   A0A194QV56   A0A194PS96   A0A212EML2   A0A067QSR3   + More
A0A2J7Q3G8   A0A1W4XJB4   V5GU31   A0A1Y1N6H8   A0A139WKX6   N6UDA0   A0A0T6AYX4   A0A0M8ZTN2   A0A310SDQ6   A0A0L7QXT3   E2AAQ1   A0A154NYP5   A0A195AUA2   A0A151JY43   A0A158P0Y2   A0A151ILV4   A0A0J7KW07   A0A151WWV8   V9IGT6   A0A088A9P5   E2B860   A0A151J1H6   A0A2A3EMB5   F4WTW8   K7J6B3   A0A232F2C6   A0A1B6IBC8   A0A2S2PP25   A0A0C9RFZ4   A0A026WE94   A0A0A9YMQ2   J9JMP6   T1KRS8   A0A0P5VIF7   A0A2S2R428   C3ZCV0   A0A0P4W4F8   A0A0P6IEN0   E9GCU4   C1BQ96   G3MLG4   A0A0P4W123   A0A224XHV8   A0A0K8TNM4   A0A069DRR4   A0A087T8N0   A0A0V0G534   A0A023EM67   A0A023GHE0   A0A0V1HHE0   A0A0V1FWP4   A0A0P4WB36   Q170Z8   T1I0J8   X2B1C3   A0A023FIB3   A0A224Z9H8   A0A1E1XCG4   A0A0V0ZGB2   A0A0V0UV10   A0A0V1KPS7   A0A0V0WQ85   A0A0V0TQU1   A0A0V1P0C7   A0A0V0SHI3   A0A023FW16   A0A0V1KQW1   A0A2L2XZD4   A0A0V0TPV6   A0A0V1BBC3   A0A0V1BBE2   A0A0V0UV30   A0A1B6LHC9   L7M4I9   A0A131Z143   A0A2H8TJ99   A0A0P5E754   A0A023EPH4   A0A0V1HAN4   A0A0V1HBL9   A0A131XBR4   A0A1L8DUK6   A0A0P6BKB7   T1IH79   A0A3B4D3X5   B0X7Z0   A0A336N2K0   A0A336MWB6   A0A0V1MNI9   A0A0F8AP11   W8AT89   A0A2T7NNW7  

Pubmed

19121390    26354079    22118469    24845553    28004739    18362917    + More
19820115    23537049    20798317    21347285    21719571    20075255    28648823    24508170    30249741    25401762    26823975    18563158    21292972    22216098    27129103    26369729    26334808    24945155    17510324    23254933    28797301    28503490    26561354    25576852    26830274    25835551    24495485   

EMBL

BABH01006733    GDQN01002352    GDQN01002338    JAT88702.1    JAT88716.1    KQ461108    + More
KPJ09199.1    KQ459594    KPI96187.1    AGBW02013811    OWR42740.1    KK852982    KDR12892.1    NEVH01019067    PNF23117.1    GALX01003314    JAB65152.1    GEZM01011431    JAV93522.1    KQ971321    KYB28649.1    APGK01033063    KB740860    KB632287    ENN78591.1    ERL91476.1    LJIG01022472    KRT80399.1    KQ435891    KOX69403.1    KQ767283    OAD53433.1    KQ414699    KOC63428.1    GL438137    EFN69501.1    KQ434783    KZC04795.1    KQ976738    KYM75756.1    KQ981515    KYN40767.1    ADTU01005902    KQ977086    KYN05868.1    LBMM01002715    KMQ94444.1    KQ982691    KYQ52145.1    JR042943    AEY59696.1    GL446283    EFN88122.1    KQ980514    KYN15746.1    KZ288212    PBC32830.1    GL888345    EGI62325.1    NNAY01001263    OXU24567.1    GECU01023460    JAS84246.1    GGMR01018554    MBY31173.1    GBYB01005975    GBYB01005976    JAG75742.1    JAG75743.1    KK107260    QOIP01000001    EZA54248.1    RLU26240.1    GBHO01010140    GBRD01006280    GDHC01000016    JAG33464.1    JAG59541.1    JAQ18613.1    ABLF02031790    CAEY01000418    GDIP01099513    LRGB01000944    JAM04202.1    KZS14524.1    GGMS01015532    MBY84735.1    GG666610    EEN49603.1    GDRN01073064    JAI63450.1    GDIQ01005647    JAN89090.1    GL732539    EFX82617.1    BT076775    ACO11199.1    JO842715    AEO34332.1    GDKW01001204    JAI55391.1    GFTR01004350    JAW12076.1    GDAI01001611    JAI15992.1    GBGD01002533    JAC86356.1    KK113970    KFM61469.1    GECL01003332    JAP02792.1    GAPW01003200    JAC10398.1    GBBM01002036    JAC33382.1    JYDU01000082    JYDR01000072    JYDS01000373    JYDV01000038    KRX93779.1    KRY70519.1    KRZ09878.1    KRZ39157.1    JYDT01000022    KRY90361.1    GDRN01073065    JAI63449.1    CH477462    EAT40546.1    ACPB03008738    AMQN01000222    GBBK01003230    JAC21252.1    GFPF01012208    MAA23354.1    GFAC01002387    JAT96801.1    JYDQ01000191    KRY11529.1    JYDN01000153    KRX55131.1    JYDW01000324    KRZ49247.1    JYDK01000076    KRX77824.1    JYDJ01000183    KRX40999.1    JYDM01000067    KRZ89621.1    JYDL01000008    KRX26255.1    GBBL01001626    JAC25694.1    KRZ49246.1    IAAA01005100    IAAA01005101    LAA01293.1    KRX41000.1    JYDH01000069    KRY34299.1    KRY34298.1    KRX55132.1    GEBQ01027684    GEBQ01016993    GEBQ01009207    JAT12293.1    JAT22984.1    JAT30770.1    GACK01005793    JAA59241.1    GEDV01003919    JAP84638.1    GFXV01001957    MBW13762.1    GDIP01151799    JAJ71603.1    GAPW01003201    GAPW01003199    JAC10399.1    JYDP01000096    KRZ07800.1    KRZ07801.1    GEFH01004544    JAP64037.1    GFDF01003963    JAV10121.1    GDIQ01222405    GDIP01027968    JAK29320.1    JAM75747.1    JH429784    DS232468    EDS42209.1    UFQT01003469    SSX35027.1    UFQT01001373    SSX30238.1    JYDO01000064    KRZ73393.1    KQ041569    KKF25197.1    GAMC01014541    GAMC01014539    GAMC01014538    GAMC01014536    GAMC01014535    JAB92020.1    PZQS01000010    PVD22842.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000027135    UP000235965    + More
UP000192223    UP000007266    UP000019118    UP000030742    UP000053105    UP000053825    UP000000311    UP000076502    UP000078540    UP000078541    UP000005205    UP000078542    UP000036403    UP000075809    UP000005203    UP000008237    UP000078492    UP000242457    UP000007755    UP000002358    UP000215335    UP000053097    UP000279307    UP000007819    UP000015104    UP000076858    UP000001554    UP000000305    UP000054359    UP000054632    UP000054805    UP000054815    UP000054826    UP000054995    UP000008820    UP000015103    UP000054783    UP000054681    UP000054721    UP000054673    UP000055048    UP000054924    UP000054630    UP000054776    UP000055024    UP000261440    UP000002320    UP000054843    UP000245119   

PRIDE

H9ITN7   

Pfam

PF05739   SNARE        + More
PF14523   Syntaxin_2
PF00957   Synaptobrevin
PF18717   CxC4

Interpro

IPR006011   Syntaxin_N        + More
IPR000727   T_SNARE_dom       
IPR010989   SNARE       
IPR006012   Syntaxin/epimorphin_CS       
IPR001388   Synaptobrevin       
IPR012340   NA-bd_OB-fold       
IPR003029   S1_domain       
IPR003034   SAP_dom       
IPR040648   HMGXB3_CxC4       

SUPFAM

SSF47661   SSF47661        + More
SSF50249   SSF50249       

CDD

cd00179  SynN

ProteinModelPortal

H9ITN7   A0A1E1WNZ0   A0A194QV56   A0A194PS96   A0A212EML2   A0A067QSR3   + More
A0A2J7Q3G8   A0A1W4XJB4   V5GU31   A0A1Y1N6H8   A0A139WKX6   N6UDA0   A0A0T6AYX4   A0A0M8ZTN2   A0A310SDQ6   A0A0L7QXT3   E2AAQ1   A0A154NYP5   A0A195AUA2   A0A151JY43   A0A158P0Y2   A0A151ILV4   A0A0J7KW07   A0A151WWV8   V9IGT6   A0A088A9P5   E2B860   A0A151J1H6   A0A2A3EMB5   F4WTW8   K7J6B3   A0A232F2C6   A0A1B6IBC8   A0A2S2PP25   A0A0C9RFZ4   A0A026WE94   A0A0A9YMQ2   J9JMP6   T1KRS8   A0A0P5VIF7   A0A2S2R428   C3ZCV0   A0A0P4W4F8   A0A0P6IEN0   E9GCU4   C1BQ96   G3MLG4   A0A0P4W123   A0A224XHV8   A0A0K8TNM4   A0A069DRR4   A0A087T8N0   A0A0V0G534   A0A023EM67   A0A023GHE0   A0A0V1HHE0   A0A0V1FWP4   A0A0P4WB36   Q170Z8   T1I0J8   X2B1C3   A0A023FIB3   A0A224Z9H8   A0A1E1XCG4   A0A0V0ZGB2   A0A0V0UV10   A0A0V1KPS7   A0A0V0WQ85   A0A0V0TQU1   A0A0V1P0C7   A0A0V0SHI3   A0A023FW16   A0A0V1KQW1   A0A2L2XZD4   A0A0V0TPV6   A0A0V1BBC3   A0A0V1BBE2   A0A0V0UV30   A0A1B6LHC9   L7M4I9   A0A131Z143   A0A2H8TJ99   A0A0P5E754   A0A023EPH4   A0A0V1HAN4   A0A0V1HBL9   A0A131XBR4   A0A1L8DUK6   A0A0P6BKB7   T1IH79   A0A3B4D3X5   B0X7Z0   A0A336N2K0   A0A336MWB6   A0A0V1MNI9   A0A0F8AP11   W8AT89   A0A2T7NNW7  

PDB

2DNX     E-value=1.09602e-10,     Score=158

KEGG

101742407    K08488 syntaxin 7 | (RefSeq) syntaxin-7

PATHWAY

04130    SNARE interactions in vesicular transport - Bombyx mori (domestic silkworm)
04145    Phagosome - Bombyx mori (domestic silkworm)

GO

GO:0005623   GO:0005484   GO:0016021   GO:0016192   GO:0006886   GO:0000149   GO:0031201   GO:0006906   GO:0008021   GO:0012505   GO:0048278   GO:0016020   GO:0003676   GO:0005515   GO:0031251   GO:0004672   GO:0003707   GO:0007169  

Length:

262

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.24694

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.90659

inside

1  -  241

TMhelix

242  -  261

outside

262  -  262

 

 

Pi

15.749812

Theta

13.179993

Tajima's D

0.086836

CLR

0.008134

CSRT

0.399730013499325

Interpretation

Uncertain