SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00174
Pre Gene Modal
BGIBMGA000615
Annotation
PREDICTED:_uncharacterized_protein_LOC101739187_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.029
 

Sequence

CDS
ATGATCGAATTACTGAAAGTGAACGATAATAGGGTGAATGGAACAATGAGGGACATCAGTGGCGACTCTTTTGTATGTCGTGTACAATATTTGAATGATCTTGACCCTTTCGTTGAGTACAATGTGAGGGAGCCTCCCAGACCTTTGTATCACACGTTTAACACTACGATTCCGCTGTCTTACCAAATAGCTGCGGTACATCGCCTCCTGCAAGCTCCTCATCGGCTTGACGATGCGACTTTGCAAGTCTTCAAGGATGGAGATTATGGACCGTATTTAGACCTGGACTCCACATTGGGTGAACAAGATGAGGAGCTTGAAGGACTTCAAGACAATCGCAAAAATGCACTGGTTCTTCGCACCCAGCTGTCTGTGCGCGTACATTCCATTATGGAACGCTTGCTACACTCTCAGGGTCGTGAGCTCCGGCGAGCTCTGTTCTCCCTCAAACAGATTCTACAGTCGGACAAGGATCTGGTCCACGAGTTTGTCGCCAACAAAGGTCTCGACTGTCTGATGCAAGTTAGCAACATGGCTGATCATAACTATCTGGATTACATACTCAGGGCCCTCGGACAGATTCTTCTATATGTCGACGGCATGCACGGCGTCATGGGTCACGAGGGGTGCATTCAATGGCTCTATTCGTTGATCTCGAGCAAATTCAGGCACGTCGTGAAAACCGCCCTCAAGCTACTTCTCGTCTTCGTCGAATACACAGAGAAGAACTGTCTTCTGTTGATCGACGCCATAATCGCAGTGGACGGTTCCGCTGGCTACCAGCCGTGGCATAACATCATGAAAATACTACAGGACTTCGACGCTTCCGATACAGAGTTGCTTATATACGCAACTACCCTAATAAACAGATGCTTGAACAATGTTCCGGACAGAGACACGTATTATGATCAAGTAGACGCTCTACAAGACCAAGGGATGGACGATATTATTCAGTTGTACATGACGAAGCAAGGTACAGACTTGGACCTTTTAAGGCAGCTGCAAATCTTTGAAGCGGTGTTGCTGTATGAAGATGGCGACGAAAGCGGAACGGCACTACAGCAACTTGATGAATCGGTTATCTCGTTGGTACGAAGGCGAAGTCTTAATTTAAATACGTCCGAGATGAGGAAGTCCAAGAAACAACAAATGCGAGAAAAAGCGAGGCCTCCGGTCATCACTCATCCCGAGCCCGAAACTAAAATCGCAAATAACCAACGCACGTCATTCCTTCCATCCATAATGGACAATAAGGAAAACAAAGATCTTAGCGCTGCACTGAGGAGGCGCAGAGATCGCTACGCCAGACAAGCGCACCATATAATACAACAACAGGAGATGTTGAACAACTCGAACACGATTTACAATGGTCTGTTTGGTGCCACCAATGGAACGTACTCAACACCGAATGGGACTACTAATGGGAATTGCAATGGAACTTACACAAGTATTAAAAATTATTCGAACGGAAGCTTGAATGGGAATCATTACGCCAACGGTGTCAATGGGCATCTGGATGACGAAGAACCATACGCTAACAGAACCACGAGGAGTCTAAACCAAACCGATGCTTTAAAGAACGGAAACCAAAGATATACCGCGGGGCTGAAACAAAGAATTCAAAATGGTACACTCGGTCACAGCGTCAGTGCTGTAGACGCTCTCGCAGCAATGCGGCAGAAGCAGCTTGACAGTACACCCGAAGCCAAAGACGACCGGGGCATCATAATCAATAGGGAGCACAGCATTAAAGACTTAGCCCAACGTCTGACTAGCCCCGTAAGCCCTACTACTGAAGAAAAACCCTTAAGGGTCTCCGAAATGGCTGGAATAGTATCTAAAGCCAAAGAGGAATTAGCGAAATCTCAATCTAAAGAAGTTATCAAAAGTCCAACAATAGAGAAATCTCAGAAAGTCCACGAAATCAAGGTATCTGAAAACGACATTCACTGGGAAGAACTGAAAAAAGGGTGCCTCAATAGAGAATTCCATCTTTGCGACCTAGATTTTTCGGATCTGAGACACGATTCTGAAGATGATATGTTATATCCGGCTGTGAGCGCTGCTAACGGCCCTCCCCCTCCGCCTCCCGGAATGTTTCCTCCCATAGGAGCCCCTCCGCCTCTCCCGGGCTGTTTCCCCATCGTACCCAAAAACAACGTACCAATACCGCCTAAGCCCTCTTTGTCATCGGAACTATCAAATAATTCCGACAGTTCAACAATTAAAAAGAACAAGAAAACAGTGAAATTGTTTTGGAAGGAAATACAAGAGAATCCGGTACCTGTGACCGTTAGACCTAAAGTAGGCGGCTTTATCTGGGATGACTTACCCAGCATCGATCTGGACACAGCAATGCTGGAGCATCTTTTTGAATCGAGAACCAATGATTTGATAATTAAGGTTTAA
Protein
MIELLKVNDNRVNGTMRDISGDSFVCRVQYLNDLDPFVEYNVREPPRPLYHTFNTTIPLSYQIAAVHRLLQAPHRLDDATLQVFKDGDYGPYLDLDSTLGEQDEELEGLQDNRKNALVLRTQLSVRVHSIMERLLHSQGRELRRALFSLKQILQSDKDLVHEFVANKGLDCLMQVSNMADHNYLDYILRALGQILLYVDGMHGVMGHEGCIQWLYSLISSKFRHVVKTALKLLLVFVEYTEKNCLLLIDAIIAVDGSAGYQPWHNIMKILQDFDASDTELLIYATTLINRCLNNVPDRDTYYDQVDALQDQGMDDIIQLYMTKQGTDLDLLRQLQIFEAVLLYEDGDESGTALQQLDESVISLVRRRSLNLNTSEMRKSKKQQMREKARPPVITHPEPETKIANNQRTSFLPSIMDNKENKDLSAALRRRRDRYARQAHHIIQQQEMLNNSNTIYNGLFGATNGTYSTPNGTTNGNCNGTYTSIKNYSNGSLNGNHYANGVNGHLDDEEPYANRTTRSLNQTDALKNGNQRYTAGLKQRIQNGTLGHSVSAVDALAAMRQKQLDSTPEAKDDRGIIINREHSIKDLAQRLTSPVSPTTEEKPLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQKVHEIKVSENDIHWEELKKGCLNREFHLCDLDFSDLRHDSEDDMLYPAVSAANGPPPPPPGMFPPIGAPPPLPGCFPIVPKNNVPIPPKPSLSSELSNNSDSSTIKKNKKTVKLFWKEIQENPVPVTVRPKVGGFIWDDLPSIDLDTAMLEHLFESRTNDLIIKV

Summary

Pfam
PF18382   Formin_GBD_N        + More
PF02181   FH2
Interpro
IPR011989   ARM-like        + More
IPR016024   ARM-type_fold       
IPR015425   FH2_Formin       
IPR041387   FHOD1_GBD_N       
IPR014768   GBD/FH3_dom       
SUPFAM
SSF48371   SSF48371       
Gene 3D
PDB
3DAD     E-value=2.21473e-86,     Score=816

Ontologies

Topology

Length:
802
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02788
Exp number, first 60 AAs:
0.00399
Total prob of N-in:
0.00136
outside
1  -  802
 
 

Population Genetic Test Statistics

Pi
2.470855
Theta
15.817228
Tajima's D
-2.276014
CLR
0.169625
CSRT
0.00369981500924954
Interpretation
Uncertain
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