Gene

KWMTBOMO00171  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000612

Annotation

paramyosin_[Bombyx_mandarina]

Location

Bomo_Chr1(+):5480333-5495343      View in EpiBrowser

Full name

Paramyosin, long form       + More
Paramyosin      

Location in the cell

Cytoskeletal   Reliability : 3.903

CDS

ATGTCTGCCATGGCGAAGACTTCCAAGTACACCTACCGCAGCAGCGGCGGGGGCACCACCGACGTTAACATCGAGTACTCCGCCGACCTGAGTGCTCTCTCCAGGCTGGAGGACAAGATTCGTCTCATCCAAGATGATCTGGAATCCGAAAGAGAGCTGCGTCAGAGGATTGAAAGAGAGAAGGCAGATTTGAGCGTGCAAGTGATTCAACTGTCTGAGAGGCTTGAGGAAGCTGAAGGCGGAGCCGAGAGCCAGTTCGAGATCAACAGAAAGCGTGACACCGAACTCCTCAAGCTACGCAAACTACTGGAAGATGTCCATTTGGAGTCAGAAGAGACCGCCCATCTGCTCAAGAAGAAGAACCAAGAGATCGTAATCGACTTCCAGGAACAAATCGACCAGCTTACCAAAACTAAAGCCAGGGCTGAGAAGGAGAAGTCCAAGTTCCAAGCTGAAGTTTACGAGCTGTTGGCCCAAGTCGAGAACGTGACCAAGGAGAAGATCACCATCTCCAAGACATGCGAGAGGCTCGAGATCACCATCAGCGAACTCCACATCAAAATCGAGGAACTGAACCGCACCATTGTGGACATCACTTCCCACAAGCAGCGTCTGTCCCAAGAGAACATCGAGCTCGTTAAGGAAGTTCAGGACCTCAAGGTCAACATTGAGAACGTAGTTTACCTGAAGAGTCAGATCGCCAGTCAACTCGAAGACTCACGCCGCAGGCTTGAGGATGAGGAGAGAAGGCGCTCTCTGCTTGAGGCCAGCCTGCACCAGGTTGAGATCGATTTGGAATCCGTTCGCGTCCAACTGGAAGAGGAGTCCGAAGCTCGTCTGGACCTCGAACGTCAGCTGGTCAAGGCTAACGGTGAGATCGGACACTGGCGCTCCAAGTTTGAGGCAGAGGCTGCTGCCAGGGCTGAGGAAATCGAGGAAATCCGTCGCAAGTACTCCATCCGCATCCAGGAACAGGAGGAGCAAATCGAGACCCTCATCGCGAAAATCAACAACGTTGAAAAACAGAAGTCTCGTCTGCAGAGCGAGGTCGAAGTCCTCATCATCGACTTGGAGAAGGCAAACGGTACTGCTCGGGAGCTTCAGAAGAGGACCGAGCAGCTGGAGCGCGTCAACATCGAGATCAAGTCCCGTCTCGAGGAGACCGTGCAGTTGTACGAGCAAACCCAGCGCGACCTGCGCAACAAACAAACAGAACTCCAGCGCGTCTCCCACGAACTCGACAAGACCCGCGAACAGAAAGACGCCCTCGCCCGCGAAAACAAGAAAATGGGTGATGACTTGCATGATGCTCGCGCGAACATCACCGAGTTGAACCGCCGTCTCCACGAGCTCGAAATCGAGTTGCGCCGTCTTGAGAACGAGCGAGAGGAACTCACTGCCGCCTACAAGGAGGCCGAAGCTGGCCGCAAGGCTGAGGAACAGCGCTCACAGAGATTGACGGCTGAGTTCGGCCAGTTCCGTCATGAGGCTGAGCGTCGTCTGCAAGAGAAGGAAGAAGAAATCGAAGCCATCCGCAAGCAGACAAGCATCGAAATCGAACAGCTGAACGCTCGCGTCGTGGAAGCCGAGACTAAATTGAAGTCTGAAGTCACACGCATCAAGAAGAAGTTGCAAATCCAGATTACTGAACTGGAACTCTCTCTTGATGTGGCCAACAAGACCAACATTGACCTCCAGAAGACCATCAAGAAGCAGTCTCTGCAGCTTACTGAGATCCAGACCCACTACGATGAGGTCCAGAGGCAGTTGCAGGTGACTCTCGACCAGTACGGAGTCGCCCAGCGCAGGATACAGTCACTCACCGGAGAGGTTGAGGAGATTCGTGGCAACTACGAGCAGGCCCTACGCGTTAAGCGCTCAGTCGAGCAGCAATACGAGGAATCTCAGACTCGCGTCAACGAGCTGACTGTTATCAACGTGAACCTGTCAAGCAGCAAGGCTAAGATAGAACAGGAACTGGCTATCGTCGCCGCCGACTACGATGAGATCACCAAGGAACTCCGCATCGCCGATGAGAGATACCAGCGCGTACAGACTGAGCTGAAACACACTGTCGAGCATCTGCATGAGGAACAGGAGAGGATCGTCAAGATCGAGGCCGTCAAGAAGTCTCTTGAAATCGAAGTCAAGAACATCTCTGTCCGTCTGGAAGAAGTCGAAGCCAACGCTATTGTTGGTGGCAAGCGTATCATCAGCAAGCTCGAGGCTCGCATCAAGGACATGGAGCTGGAGCTGGACGAAGAGAAGAGGAGACACGCTGAAACCATCAAGATCCTCCGCAAGAAGGAGCGTCAACTTAAGGAGGTCATCATTCAGTGCGAGGAGGATCAGAAGAACATCTCTCTCCTCCAAGATTCTTTGGAGAAAACCTCCCAGAAAGTCAGCATCTACAAAAGGCAGTTGGCTGAACAAGAGGGCATGTCGCAGCAGAGCGTGACCCGTGTCCGACGATTCCAGCGTGAATTGGAAGCCGCCGAAGACCGCGCCGACGTCGCCGAGAGTAACCTCTCCCTCATCCGCGCCAAGCACCGCACTTTCGTCACCACCTCCACTGTCCCCGGCTCCCAGGTCTATCTGGTCCAGGAGTCCCGCGCCCTCAGCAGTGAGCGCTTGTGA

Protein

MSAMAKTSKYTYRSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLKKKNQEIVIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELNRTIVDITSHKQRLSQENIELVKEVQDLKVNIENVVYLKSQIASQLEDSRRRLEDEERRRSLLEASLHQVEIDLESVRVQLEEESEARLDLERQLVKANGEIGHWRSKFEAEAAARAEEIEEIRRKYSIRIQEQEEQIETLIAKINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQLYEQTQRDLRNKQTELQRVSHELDKTREQKDALARENKKMGDDLHDARANITELNRRLHELEIELRRLENEREELTAAYKEAEAGRKAEEQRSQRLTAEFGQFRHEAERRLQEKEEEIEAIRKQTSIEIEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALSSERL

Subunit

Heterodimer of two isoforms.
Homodimer (By similarity). Binds IgG and collagen.

Similarity

Belongs to the paramyosin family.

Keywords

Alternative splicing   Coiled coil   Complete proteome   Cytoplasm   Disulfide bond   Motor protein   Muscle protein   Myosin   Phosphoprotein   Reference proteome   Thick filament  

Feature

chain  Paramyosin, long form

Uniprot

B3VTP1   B3VTP0   A0A1E1W951   I4DIM8   A0A2W1BVZ9   A0A220K8I6   + More
A0A158P2F1   A0A154PJZ1   A0A067QTE0   T1TDK7   A0A2P0XJ16   E0W1N5   A0A1D1XRP2   K7J7N4   A0A0C9QWE9   A0A1B6M0J9   A0A0U2P8E2   A0A1Y1LDT2   V5JDH4   A0A0V0G432   A0A069DXC3   A0A224XEL1   J3JWD1   A0A1B6DT10   A0A0A9ZEU2   J9JLC9   N6URC7   A0A1L8E615   A0A1L8E5E1   R4WJA9   A0A2H8TFR6   A0A336K8M6   A0A161MH97   T1DEY1   Q16RF4   Q7Q978   W8B7X0   A0A1Q3FLR8   A0A1Q3FLP3   B0WAN1   A0A2S2PTC4   A0A034VYF9   A0A1I8M288   B4LEN1   T1PAN3   A0A0A1XPA0   B4KZE9   A0A084WJC3   A0A182H9L7   Q29D19   B4MME5   B3M666   E3UKM1   A0A1I8Q7K6   A0A3B0JAB6   B4IWK5   A4V1N8   P35415   B4PFJ4   A0A0J9UHH8   B3NBN9   A0A0P5GEN8   A0A0P5CTV5   A0A0P5DZD0   A0A0P4YX30   A0A0P5AYE0   A0A0P5LFD6   A0A0P5ERA9   A0A0P5KSQ9   A0A0P4XU28   E9HSV9   A0A0N8EFR9   A0A034VWV4   A0A0P6IDQ4   A0A0N8E2Z7   A0A0P4YYM0   A0A0P4Z209   A0A0A1XRE6   A0A0P5G4J7   A0A0N8BG46   A0A0N7ZRA9   A0A0P4ZX51   A0A0P4Z7X3   A0A1E1XF81   A0A131YPL3   Q86RN8   A0A224Z3R1   T1JZH9   A0A293N0M9   J7LVN2   A0A0N8AB64   A0A0P5KQJ8   A0A0P5FTL9   A0A2R5LHU5   A0A0P5GCR2   T1J4Y6   V5H2W8   A0A131Y4I2   V9IE68   A0A2I9LPE3  

Pubmed

22651552    28756777    28630352    21347285    24845553    20566863    + More
20075255    28004739    26334808    22516182    25401762    26823975    23537049    23691247    17510324    12364791    14747013    17210077    24495485    25348373    25315136    17994087    25830018    24438588    26483478    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    1730773    1371577    12537569    1908014    18327897    17550304    22936249    21292972    28503490    26830274    12358423    28797301    23864744    25765539    29248469   

EMBL

EU812511    ACF21977.1    EU812510    ACF21976.1    GDQN01007607    JAT83447.1    + More
AK401146    BAM17768.1    KZ149901    PZC78511.1    MF319694    ASJ26408.1    ADTU01007254    ADTU01007255    ADTU01007256    KQ434939    KZC12179.1    KK853297    KDR08790.1    KC996759    AGT62469.1    KY661339    AVA17426.1    DS235873    EEB19617.1    GDJX01022864    JAT45072.1    AAZX01006943    GBYB01008059    JAG77826.1    GEBQ01010529    JAT29448.1    KR181949    ALJ76673.1    GEZM01061383    JAV70510.1    KC122914    AGI96992.1    GECL01003304    JAP02820.1    GBGD01000423    JAC88466.1    GFTR01008208    JAW08218.1    BT127549    AEE62511.1    GEDC01008484    JAS28814.1    GBHO01000640    GBHO01000637    GBRD01009387    GDHC01010732    JAG42964.1    JAG42967.1    JAG56437.1    JAQ07897.1    ABLF02029934    APGK01019720    APGK01019721    APGK01019722    APGK01019723    APGK01019724    KB740120    ENN81307.1    GFDF01000132    JAV13952.1    GFDF01000133    JAV13951.1    AK417585    BAN20800.1    GFXV01000313    MBW12118.1    UFQS01000086    UFQT01000086    SSW99113.1    SSX19495.1    GEMB01002490    JAS00696.1    GAMD01003336    JAA98254.1    CH477712    EAT36995.1    AAAB01008905    EAA09724.4    GAMC01020636    GAMC01020635    JAB85919.1    GFDL01006581    JAV28464.1    GFDL01006578    JAV28467.1    DS231873    EDS41585.1    GGMR01020113    MBY32732.1    GAKP01012374    JAC46578.1    CH940647    EDW69116.1    KA645764    AFP60393.1    GBXI01001103    JAD13189.1    CH933809    EDW17876.1    ATLV01024008    ATLV01024009    KE525348    KFB50317.1    JXUM01030443    JXUM01030444    JXUM01030445    JXUM01030446    JXUM01030447    KQ560885    KXJ80479.1    CH379070    EAL30595.3    CH963847    EDW73290.1    CH902618    EDV39686.1    HM449895    ADO33030.1    OUUW01000002    SPP77373.1    CH916366    EDV96231.1    AE014296    BT044164    AAN11994.1    ACH92229.1    X62590    X58722    AY069132    CM000159    EDW93120.1    CM002912    KMY98467.1    KMY98470.1    CH954178    EDV50635.1    GDIQ01245783    GDIP01074834    LRGB01001830    JAK05942.1    JAM28881.1    KZS10371.1    GDIP01165579    JAJ57823.1    GDIP01166972    JAJ56430.1    GDIP01221375    JAJ02027.1    GDIP01196722    JAJ26680.1    GDIQ01181092    JAK70633.1    GDIQ01266159    JAJ85565.1    GDIQ01179744    JAK71981.1    GDIP01237775    JAI85626.1    GL732759    EFX65159.1    GDIQ01031116    JAN63621.1    GAKP01012375    JAC46577.1    GDIQ01022719    JAN72018.1    GDIQ01066892    JAN27845.1    GDIP01220268    JAJ03134.1    GDIP01220267    JAJ03135.1    GBXI01000463    JAD13829.1    GDIQ01268140    JAJ83584.1    GDIQ01181091    JAK70634.1    GDIP01220265    JAJ03137.1    GDIP01220266    JAJ03136.1    GDIP01228768    JAI94633.1    GFAC01001422    JAT97766.1    GEDV01007363    JAP81194.1    AF479582    GFPF01010425    MAA21571.1    CAEY01001120    GFWV01020227    MAA44955.1    JQ517315    AFR32950.1    GDIP01164625    JAJ58777.1    GDIQ01181093    JAK70632.1    GDIQ01250231    JAK01494.1    GGLE01004965    MBY09091.1    GDIQ01244488    JAK07237.1    JH431850    GANP01007138    JAB77330.1    GEFM01002830    JAP72966.1    JR039212    AEY58584.1    GFWZ01000271    MBW20261.1   

Proteomes

UP000005205    UP000076502    UP000027135    UP000009046    UP000002358    UP000007819    + More
UP000019118    UP000008820    UP000007062    UP000002320    UP000095301    UP000008792    UP000009192    UP000030765    UP000069940    UP000249989    UP000001819    UP000007798    UP000007801    UP000095300    UP000268350    UP000001070    UP000000803    UP000002282    UP000008711    UP000076858    UP000000305    UP000015104   

PRIDE

B3VTP1    B3VTP0    K7J7N4    J9JLC9    B4LEN1    Q29D19    + More
B3M666    E3UKM1    B4IWK5    P35415    E9HSV9   

Pfam

PF01576   Myosin_tail_1

Interpro

IPR002928   Myosin_tail       

ProteinModelPortal

B3VTP1   B3VTP0   A0A1E1W951   I4DIM8   A0A2W1BVZ9   A0A220K8I6   + More
A0A158P2F1   A0A154PJZ1   A0A067QTE0   T1TDK7   A0A2P0XJ16   E0W1N5   A0A1D1XRP2   K7J7N4   A0A0C9QWE9   A0A1B6M0J9   A0A0U2P8E2   A0A1Y1LDT2   V5JDH4   A0A0V0G432   A0A069DXC3   A0A224XEL1   J3JWD1   A0A1B6DT10   A0A0A9ZEU2   J9JLC9   N6URC7   A0A1L8E615   A0A1L8E5E1   R4WJA9   A0A2H8TFR6   A0A336K8M6   A0A161MH97   T1DEY1   Q16RF4   Q7Q978   W8B7X0   A0A1Q3FLR8   A0A1Q3FLP3   B0WAN1   A0A2S2PTC4   A0A034VYF9   A0A1I8M288   B4LEN1   T1PAN3   A0A0A1XPA0   B4KZE9   A0A084WJC3   A0A182H9L7   Q29D19   B4MME5   B3M666   E3UKM1   A0A1I8Q7K6   A0A3B0JAB6   B4IWK5   A4V1N8   P35415   B4PFJ4   A0A0J9UHH8   B3NBN9   A0A0P5GEN8   A0A0P5CTV5   A0A0P5DZD0   A0A0P4YX30   A0A0P5AYE0   A0A0P5LFD6   A0A0P5ERA9   A0A0P5KSQ9   A0A0P4XU28   E9HSV9   A0A0N8EFR9   A0A034VWV4   A0A0P6IDQ4   A0A0N8E2Z7   A0A0P4YYM0   A0A0P4Z209   A0A0A1XRE6   A0A0P5G4J7   A0A0N8BG46   A0A0N7ZRA9   A0A0P4ZX51   A0A0P4Z7X3   A0A1E1XF81   A0A131YPL3   Q86RN8   A0A224Z3R1   T1JZH9   A0A293N0M9   J7LVN2   A0A0N8AB64   A0A0P5KQJ8   A0A0P5FTL9   A0A2R5LHU5   A0A0P5GCR2   T1J4Y6   V5H2W8   A0A131Y4I2   V9IE68   A0A2I9LPE3  

PDB

3JBH     E-value=3.35708e-106,     Score=987

KEGG

100174848    no KO assigned | (RefSeq) paramyosin

GO

GO:0016459   GO:0003774   GO:0030239   GO:0007498   GO:0005863   GO:0031430   GO:0030016   GO:0032982   GO:0006468   GO:0007169   GO:0016020   GO:0004713   GO:0004672   GO:0003707   GO:0016021  

Subcellular location

  

Length:

878

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00074

Exp number, first 60 AAs:

0.00022

Total prob of N-in:

0.00010

outside

1  -  878

 

 

Pi

0.465952

Theta

5.209743

Tajima's D

-2.535431

CLR

10.335981

CSRT

0.000149992500374981

Interpretation

Uncertain